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The map label for this gene is potC [H]

Identifier: 146337979

GI number: 146337979

Start: 923501

End: 924316

Strand: Reverse

Name: potC [H]

Synonym: BRADO0871

Alternate gene names: 146337979

Gene position: 924316-923501 (Counterclockwise)

Preceding gene: 146337980

Following gene: 146337977

Centisome position: 12.4

GC content: 64.83

Gene sequence:

>816_bases
ATGAGCAAGCGGCAGCGCAACTGGGAGGCGCTCAGCTTCCAGATCGTGATGACGGTGATTGCGGTGCTGGCGCTGATCCT
GATCGTCTCGCCGTCGCTGGTCGTCCTGATCGTCTCGTTCACGTCGGGCTTCTCGCTGAAATTCCCGCCGCCCGGCTATT
CGACACGCTGGTACGTCGAATTGTGGAATGCCTGGCAGCTGCAATTCGCCGCGCGTAACAGCGTCTTTGTCGCGCTGTGG
TCGACCGGGTTGTCGATCGTGCTCGGCGTCGCCGCGGCGCTGGCGATCTCGCGCTCCAAGACGCTGACGGCGAAGCTTCT
GGACTCGCTGTTCATGTCGCCGCTGGTGCTGCCCGCGCTCGCCTTCGGTCTGGCGGCACTGATGTTCTTCTCGCTGATCG
GCCTGCCGGTGTCGCTGCTGACGCTGGTGATCGGCCACACCATCGTCTGCGTGCCCTACGTGGTCCGCAACACGGTGGCC
GCACTGGCGCAGCTCGAGCCTACCCTGCTGGAAAGCTCGGCGATCCTCGGCGCGTCCAGGCTCTATACGTTCCGCCGCAT
CGTGCTGCCGCTGATCCGCCCCGGCATCATCTCCGGCGCCTTCATCGCTTTCATGTCGTCGTTCGACAACGTCCCGGTGT
CGCTGTTCCTGCGCGACGCCGCCACCGACATGCTGCCGATCCGGATGTGGCAGGACCTCGAAGGCAAGCTCGACGTCACC
ATCGCCGCGCTGTCGAGCGTGCTGATCATCGCAACCGTCGCGCTGATGGCGATCATGGAGCGCACGACGGGACTGTCGAA
GCGGCTGACGGGTTGA

Upstream 100 bases:

>100_bases
TCGCGGCGGCGATCTCGATCATCTTCCTGTTCGCAGTGCTCGCGATCGTCGCGCTGTTCTCGACGCTCGGCCGGCGCGCC
CGCGGCTATGGAGATGCGCG

Downstream 100 bases:

>100_bases
GGACCGCTCAGGCCTTACGGCGCTAGTTCGTCTCCCTCTGGCAGCGCGGTCATGGCCGGGCTTGTCCCGGCCATCCACGT
CGACCGGCAATCGCGGATCA

Product: ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSKRQRNWEALSFQIVMTVIAVLALILIVSPSLVVLIVSFTSGFSLKFPPPGYSTRWYVELWNAWQLQFAARNSVFVALW
STGLSIVLGVAAALAISRSKTLTAKLLDSLFMSPLVLPALAFGLAALMFFSLIGLPVSLLTLVIGHTIVCVPYVVRNTVA
ALAQLEPTLLESSAILGASRLYTFRRIVLPLIRPGIISGAFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVT
IAALSSVLIIATVALMAIMERTTGLSKRLTG

Sequences:

>Translated_271_residues
MSKRQRNWEALSFQIVMTVIAVLALILIVSPSLVVLIVSFTSGFSLKFPPPGYSTRWYVELWNAWQLQFAARNSVFVALW
STGLSIVLGVAAALAISRSKTLTAKLLDSLFMSPLVLPALAFGLAALMFFSLIGLPVSLLTLVIGHTIVCVPYVVRNTVA
ALAQLEPTLLESSAILGASRLYTFRRIVLPLIRPGIISGAFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVT
IAALSSVLIIATVALMAIMERTTGLSKRLTG
>Mature_270_residues
SKRQRNWEALSFQIVMTVIAVLALILIVSPSLVVLIVSFTSGFSLKFPPPGYSTRWYVELWNAWQLQFAARNSVFVALWS
TGLSIVLGVAAALAISRSKTLTAKLLDSLFMSPLVLPALAFGLAALMFFSLIGLPVSLLTLVIGHTIVCVPYVVRNTVAA
LAQLEPTLLESSAILGASRLYTFRRIVLPLIRPGIISGAFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVTI
AALSSVLIIATVALMAIMERTTGLSKRLTG

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=199, Percent_Identity=26.6331658291457, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787081, Length=246, Percent_Identity=29.6747967479675, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787714, Length=221, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29430; Mature: 29298

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRQRNWEALSFQIVMTVIAVLALILIVSPSLVVLIVSFTSGFSLKFPPPGYSTRWYVE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCEEECCCCCCCCEEEEE
LWNAWQLQFAARNSVFVALWSTGLSIVLGVAAALAISRSKTLTAKLLDSLFMSPLVLPAL
ECCHHHEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AFGLAALMFFSLIGLPVSLLTLVIGHTIVCVPYVVRNTVAALAQLEPTLLESSAILGASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LYTFRRIVLPLIRPGIISGAFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVT
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHHHCCCCCHHHH
IAALSSVLIIATVALMAIMERTTGLSKRLTG
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
SKRQRNWEALSFQIVMTVIAVLALILIVSPSLVVLIVSFTSGFSLKFPPPGYSTRWYVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCEEECCCCCCCCEEEEE
LWNAWQLQFAARNSVFVALWSTGLSIVLGVAAALAISRSKTLTAKLLDSLFMSPLVLPAL
ECCHHHEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AFGLAALMFFSLIGLPVSLLTLVIGHTIVCVPYVVRNTVAALAQLEPTLLESSAILGASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LYTFRRIVLPLIRPGIISGAFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVT
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHHHCCCCCHHHH
IAALSSVLIIATVALMAIMERTTGLSKRLTG
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]