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The map label for this gene is rlpA [C]

Identifier: 146337560

GI number: 146337560

Start: 424855

End: 425400

Strand: Reverse

Name: rlpA [C]

Synonym: BRADO0414

Alternate gene names: 146337560

Gene position: 425400-424855 (Counterclockwise)

Preceding gene: 146337567

Following gene: 146337558

Centisome position: 5.71

GC content: 67.4

Gene sequence:

>546_bases
ATGCTGAAACTCAACAACCTCTCGGCTGGCAAGATCGCCGGCTCGCGTACCGCACTCGCCGTTGCCGTGACGCTGATCGT
CGGTGGCACCGCCACCGAAGCCTCGGCCCGCTCCAGGCACCATCACCATCATCACGCTCGCCATCATCATCACATGGCGC
GCCAGGCTGCTCAGCCCGCAGCAGACTCCTTTTCTAACGGCTGGTCGAACAACTCGTCCTGGATGAATTCCAATGCCTCG
GTCGCGCCGACGTCCGGCACCGGCCGCACCTTCTCGGGCATGGCGTCCTACTACGGCAACGAGTCCGGCAGCCGCACCGC
CTCCGGCCAGCGCATGAACGCCAACGCCATGACCTGCGCCCACCGCTCGCTGCCGTTCGGCACCAAGCTGCGCGTCACCC
ACGGCGGCAACAGCGTCATCGTCACCGTCAATGATCGTGGTCCGTTCATCCGCGGCCGCGTGCTCGACCTCTCGACCGGC
GCCGCCCGCGCCATCGGCCTGACCCGCTCGGGCGTCGGCCGCGTGACCGCCGAGGTCGTGTCGTAA

Upstream 100 bases:

>100_bases
CCCATTCGTGCCTCATTGCGCCAGCAAACGGCGCGCGCCTCAACACCTGACGGGGGTCCACTGGCTGCAGAACGCAGCAA
TACTGTTTCGAGGGACATCG

Downstream 100 bases:

>100_bases
GACACCTATCTATCCGCGCGTCATTGCGAGGAGCGAAGCGACGAAGCAATCCAGAGTCCCACCCCGGCCCCTGGATTGCT
TCGCTGCGCTCGCAATGACG

Product: putative rare lipoprotein A (RlpA-like) secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLKLNNLSAGKIAGSRTALAVAVTLIVGGTATEASARSRHHHHHHARHHHHMARQAAQPAADSFSNGWSNNSSWMNSNAS
VAPTSGTGRTFSGMASYYGNESGSRTASGQRMNANAMTCAHRSLPFGTKLRVTHGGNSVIVTVNDRGPFIRGRVLDLSTG
AARAIGLTRSGVGRVTAEVVS

Sequences:

>Translated_181_residues
MLKLNNLSAGKIAGSRTALAVAVTLIVGGTATEASARSRHHHHHHARHHHHMARQAAQPAADSFSNGWSNNSSWMNSNAS
VAPTSGTGRTFSGMASYYGNESGSRTASGQRMNANAMTCAHRSLPFGTKLRVTHGGNSVIVTVNDRGPFIRGRVLDLSTG
AARAIGLTRSGVGRVTAEVVS
>Mature_181_residues
MLKLNNLSAGKIAGSRTALAVAVTLIVGGTATEASARSRHHHHHHARHHHHMARQAAQPAADSFSNGWSNNSSWMNSNAS
VAPTSGTGRTFSGMASYYGNESGSRTASGQRMNANAMTCAHRSLPFGTKLRVTHGGNSVIVTVNDRGPFIRGRVLDLSTG
AARAIGLTRSGVGRVTAEVVS

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 18936; Mature: 18936

Theoretical pI: Translated: 12.29; Mature: 12.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLNNLSAGKIAGSRTALAVAVTLIVGGTATEASARSRHHHHHHARHHHHMARQAAQPA
CEECCCCCCCCCCCCHHHHHEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADSFSNGWSNNSSWMNSNASVAPTSGTGRTFSGMASYYGNESGSRTASGQRMNANAMTCA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCEEEH
HRSLPFGTKLRVTHGGNSVIVTVNDRGPFIRGRVLDLSTGAARAIGLTRSGVGRVTAEVV
HCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCEEECCCCCCCCEEHEEC
S
C
>Mature Secondary Structure
MLKLNNLSAGKIAGSRTALAVAVTLIVGGTATEASARSRHHHHHHARHHHHMARQAAQPA
CEECCCCCCCCCCCCHHHHHEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADSFSNGWSNNSSWMNSNASVAPTSGTGRTFSGMASYYGNESGSRTASGQRMNANAMTCA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCEEEH
HRSLPFGTKLRVTHGGNSVIVTVNDRGPFIRGRVLDLSTGAARAIGLTRSGVGRVTAEVV
HCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCEEECCCCCCCCEEHEEC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]