Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302719

Identifier: 146302719

GI number: 146302719

Start: 6028554

End: 6029741

Strand: Reverse

Name: 146302719

Synonym: Fjoh_4992

Alternate gene names: NA

Gene position: 6029741-6028554 (Counterclockwise)

Preceding gene: 146302721

Following gene: 146302717

Centisome position: 98.9

GC content: 34.43

Gene sequence:

>1188_bases
ATGAAAATTAAAGAGAATTTATATAATCAAAGGATTATTTCGATTGACGCTTTACGTGGAATTACCATTTTTGTAATGAT
ATTTGTAAATGAGCTTGCAAGCATCCAAAATGTACCTCAATGGATGAAACACATGCCTGCAGATGCAGATGCGATGACCT
TTGTCGATTTAGTTTTCCCTGCTTTTTTATTTATAGTTGGAATGTCAGTTCCATTTGCATTTAACGCCAGATTAATAAAA
GGCGACAGTCCAAAAGTAATCTGGACTCATACCTTAAAACGTGCTTTAGCATTAATCATAATTGGTGTTTATATGGTTAA
TTCAAGTGAAGGTTACGACGCCTCAAAAATGATAATAACACCAGCTTTTTGGGGACTTTTAGCTTATTCAATGCCAATTC
CTATCTGGAATAAATATCCAAAAGACTTTTCGGTTGTATTAAAATCCATTCTGCAATATGGCGGTATGGTGGTTTTAATT
GCACTTTATTTTTTATATGTTCAGGAAGAAACAGGAAAAATAGGAATCACGCCAAAATGGTGGGGAATTCTGGGTTTAAT
AGGCTGGGCTTATCTTATTTCAGTAATTTACTATTGGCTGGTTTCGGGAAAATTATGGGCAATGATTGTTTTTCTGATAG
TCTGCGTTGTCGGAAATTCAGCAAACCTGACCCCAGGTGTAAATATGCCGGAATGGCTGGGATTTATTGCAGGCCATTTA
ACCCATGCTACATTAGTATCAGCCGGAATCGTAATTTCGCTTTTGTTTTTTGATAGAAAAATCGAAAACAAAATCAATTG
GCCGGTAATAGGTTTTATAATTTTGTTTTTTGCCGCTGGATTTTTTCTGCGTCAATATTATGGAATTTCAAAAATACATG
GAACTCCTGCATGGACACTAATTTCTGCTGGAATCTGCACCGTTCTGTTTTACTTTTTGTATTGGTTAATGGAAGTTAAA
AAACAAACTAAATGGAGTGAGTTTTTTATGCCTGCCGCAGCAAATCCGTTATTAATTTATATTCTGCCGGGTGTTATTTA
TTATTTCTGCAAAGTTGTCAATCTTCATATAATCCCAGGATATTTTAGAGAAGGCGTTCCTGGAATTCTTTGGTCTTTAG
TGTTTTCGATTATAATGCTTTACGTAATGAAAATCTTTAATAGATTTAAAATTCAGCTTCATCTTTAA

Upstream 100 bases:

>100_bases
CGTTTTTATTTATGCTTAACAAAATACTTCAAAATAAAATAATGTAACAATGTAACAACATTTCAGAATTATATTATATT
TGATAAAAAAGTAATATTTT

Downstream 100 bases:

>100_bases
TTTTTAGTCACAGTATTCAGTCTGAGACTGTAAACTGTAAACTGTGACTGAATACTGTAGACTGAGACTGAATACTATTC
TATAACAACAGATTTTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFPAFLFIVGMSVPFAFNARLIK
GDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIITPAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLI
ALYFLYVQEETGKIGITPKWWGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL
THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTLISAGICTVLFYFLYWLMEVK
KQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPGYFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL

Sequences:

>Translated_395_residues
MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFPAFLFIVGMSVPFAFNARLIK
GDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIITPAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLI
ALYFLYVQEETGKIGITPKWWGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL
THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTLISAGICTVLFYFLYWLMEVK
KQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPGYFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL
>Mature_395_residues
MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFPAFLFIVGMSVPFAFNARLIK
GDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIITPAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLI
ALYFLYVQEETGKIGITPKWWGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL
THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTLISAGICTVLFYFLYWLMEVK
KQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPGYFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL

Specific function: Unknown

COG id: COG4299

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45044; Mature: 45044

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFP
CCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH
AFLFIVGMSVPFAFNARLIKGDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIIT
HHHHHHHCCCCCEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEH
PAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLIALYFLYVQEETGKIGITPKW
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHH
WGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
ISAGICTVLFYFLYWLMEVKKQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHEECC
YFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFP
CCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH
AFLFIVGMSVPFAFNARLIKGDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIIT
HHHHHHHCCCCCEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEH
PAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLIALYFLYVQEETGKIGITPKW
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHH
WGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
ISAGICTVLFYFLYWLMEVKKQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHEECC
YFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA