| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302717
Identifier: 146302717
GI number: 146302717
Start: 6026587
End: 6027723
Strand: Reverse
Name: 146302717
Synonym: Fjoh_4990
Alternate gene names: NA
Gene position: 6027723-6026587 (Counterclockwise)
Preceding gene: 146302719
Following gene: 146302716
Centisome position: 98.87
GC content: 35.97
Gene sequence:
>1137_bases ATGCAAGTCTGCTATTGCCAAAACGATTCTATTTCGAGAAATAACAAAGACATTCTCGATGTTTTGTATAAGCTTTTTAA TAAAAACGATTCATTACGAAAAAGCGAGGATAAAAAAATAGCATTTTCCCTGCTTCCAGTACCACTAGATGCCGATAAAA ATACAGGTTTGGTCGTGTCGTTTTTAACTACCTTTTATCTTGGCGACAGCGACAAGACTAAAATGTCGCAGGTTTCATTT TCGCCTTATTTTAGTTTTACCAAACAATATGTTTTTCCTGTTCAAAGTTATATTTATACAAAAGATAACAAATGGAATTT TATAGGCGATTATCGATATATGATTTATCCGCAGGATACTTACGGTTTGGGCGGACATAATACAGATGAAAAAATGTCAA CTCTGGATTATCAGCAATGGCGTTTTTATCAGTTTGCAACCCGAAAAGTAATTGGTAATTTCAGACTCGGACTGGGATTG CTGCTGGATAATTACCAAAACATTTCCGAAGACTCTTATATAGATGAAGTAACAGATTATGTTAAATATATGAATGGCGA TTTTTCAGATGAAACTTCTTTTGGGGCTGCCATTCAGGGACTTTATGATTCCAGAGAAAACAATGTAAATCCGGAACAAG GTTTGTATGTTGAGGCAGATTACCGAATTAATACAAGCGGTGTGGAAGGAAAAAAGTGGAATTCAATTTATTTTGATGCC CGTAAATACCATTCTTTTCATAAGTACAAACATCGGGTTTTAGCTTATCGTGCCTTTTATTGGTCTACTTTTGGCGGAAA ACCTCATTATTTAGATCTGCCAAGTATTGGCTGGGATCGCGATGGCAGAACCGGACGCGGATTTACCCGAAACAGGTTTC GAAGTAATGCCCTGATTTATTTTGAAACGGAATACCGAACTGATATTTCAAAAAACGGATTCTGGGGTGCCGTATTTTTT ACCAATATTTCCTCGGTTTCAAAATTAGAAACGTATCAGTTTAAAAAGTGGAATCCGGCAATTGGAACGGGATTACGCAT TAAATGGAACAAGAAAAACAATAGTAATTTAGTTCTAGATTACGGAATTAGTAAAAACGACTGGTCATTGCGGTTAGGTT TAGCCGAAAATTTCTAA
Upstream 100 bases:
>100_bases CTATTCTGAATAAAATTTTAAATTTGTAAGATATTGTTTTTGAAAAGCTTAAGATATGAAAAATGCAAAACTTCTATTGG GTTTCTTTTTCTTTTTTCAA
Downstream 100 bases:
>100_bases CTTTCCCCAAAATCAAATTTTAAATTTTCAATGCAATTATCGGTTGTTATTCTTAATTATAATGTGCGTTACTTTCTAGA ACAATGTGTTTTAAGTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVSFLTTFYLGDSDKTKMSQVSF SPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDTYGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGL LLDNYQNISEDSYIDEVTDYVKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIYFETEYRTDISKNGFWGAVFF TNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLDYGISKNDWSLRLGLAENF
Sequences:
>Translated_378_residues MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVSFLTTFYLGDSDKTKMSQVSF SPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDTYGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGL LLDNYQNISEDSYIDEVTDYVKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIYFETEYRTDISKNGFWGAVFF TNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLDYGISKNDWSLRLGLAENF >Mature_378_residues MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVSFLTTFYLGDSDKTKMSQVSF SPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDTYGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGL LLDNYQNISEDSYIDEVTDYVKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIYFETEYRTDISKNGFWGAVFF TNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLDYGISKNDWSLRLGLAENF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44286; Mature: 44286
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVS CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEE FLTTFYLGDSDKTKMSQVSFSPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDT EEHHHEECCCCCCCHHEEECCHHHHHHHHHHEEEEEEEEECCCCEEEEEEEEEEEEECCC YGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGLLLDNYQNISEDSYIDEVTDY CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHH VKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEH RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIY HHHHHHHHHHHHHHEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCEEE FETEYRTDISKNGFWGAVFFTNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLD EEECCCCCCCCCCCEEEEEEECCCHHHHHHHEEEECCCCCCCCCEEEEECCCCCCEEEEE YGISKNDWSLRLGLAENF ECCCCCCCEEEEEECCCC >Mature Secondary Structure MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVS CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEE FLTTFYLGDSDKTKMSQVSFSPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDT EEHHHEECCCCCCCHHEEECCHHHHHHHHHHEEEEEEEEECCCCEEEEEEEEEEEEECCC YGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGLLLDNYQNISEDSYIDEVTDY CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHH VKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEH RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIY HHHHHHHHHHHHHHEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCEEE FETEYRTDISKNGFWGAVFFTNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLD EEECCCCCCCCCCCEEEEEEECCCHHHHHHHEEEECCCCCCCCCEEEEECCCCCCEEEEE YGISKNDWSLRLGLAENF ECCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA