Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302717

Identifier: 146302717

GI number: 146302717

Start: 6026587

End: 6027723

Strand: Reverse

Name: 146302717

Synonym: Fjoh_4990

Alternate gene names: NA

Gene position: 6027723-6026587 (Counterclockwise)

Preceding gene: 146302719

Following gene: 146302716

Centisome position: 98.87

GC content: 35.97

Gene sequence:

>1137_bases
ATGCAAGTCTGCTATTGCCAAAACGATTCTATTTCGAGAAATAACAAAGACATTCTCGATGTTTTGTATAAGCTTTTTAA
TAAAAACGATTCATTACGAAAAAGCGAGGATAAAAAAATAGCATTTTCCCTGCTTCCAGTACCACTAGATGCCGATAAAA
ATACAGGTTTGGTCGTGTCGTTTTTAACTACCTTTTATCTTGGCGACAGCGACAAGACTAAAATGTCGCAGGTTTCATTT
TCGCCTTATTTTAGTTTTACCAAACAATATGTTTTTCCTGTTCAAAGTTATATTTATACAAAAGATAACAAATGGAATTT
TATAGGCGATTATCGATATATGATTTATCCGCAGGATACTTACGGTTTGGGCGGACATAATACAGATGAAAAAATGTCAA
CTCTGGATTATCAGCAATGGCGTTTTTATCAGTTTGCAACCCGAAAAGTAATTGGTAATTTCAGACTCGGACTGGGATTG
CTGCTGGATAATTACCAAAACATTTCCGAAGACTCTTATATAGATGAAGTAACAGATTATGTTAAATATATGAATGGCGA
TTTTTCAGATGAAACTTCTTTTGGGGCTGCCATTCAGGGACTTTATGATTCCAGAGAAAACAATGTAAATCCGGAACAAG
GTTTGTATGTTGAGGCAGATTACCGAATTAATACAAGCGGTGTGGAAGGAAAAAAGTGGAATTCAATTTATTTTGATGCC
CGTAAATACCATTCTTTTCATAAGTACAAACATCGGGTTTTAGCTTATCGTGCCTTTTATTGGTCTACTTTTGGCGGAAA
ACCTCATTATTTAGATCTGCCAAGTATTGGCTGGGATCGCGATGGCAGAACCGGACGCGGATTTACCCGAAACAGGTTTC
GAAGTAATGCCCTGATTTATTTTGAAACGGAATACCGAACTGATATTTCAAAAAACGGATTCTGGGGTGCCGTATTTTTT
ACCAATATTTCCTCGGTTTCAAAATTAGAAACGTATCAGTTTAAAAAGTGGAATCCGGCAATTGGAACGGGATTACGCAT
TAAATGGAACAAGAAAAACAATAGTAATTTAGTTCTAGATTACGGAATTAGTAAAAACGACTGGTCATTGCGGTTAGGTT
TAGCCGAAAATTTCTAA

Upstream 100 bases:

>100_bases
CTATTCTGAATAAAATTTTAAATTTGTAAGATATTGTTTTTGAAAAGCTTAAGATATGAAAAATGCAAAACTTCTATTGG
GTTTCTTTTTCTTTTTTCAA

Downstream 100 bases:

>100_bases
CTTTCCCCAAAATCAAATTTTAAATTTTCAATGCAATTATCGGTTGTTATTCTTAATTATAATGTGCGTTACTTTCTAGA
ACAATGTGTTTTAAGTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVSFLTTFYLGDSDKTKMSQVSF
SPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDTYGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGL
LLDNYQNISEDSYIDEVTDYVKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA
RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIYFETEYRTDISKNGFWGAVFF
TNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLDYGISKNDWSLRLGLAENF

Sequences:

>Translated_378_residues
MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVSFLTTFYLGDSDKTKMSQVSF
SPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDTYGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGL
LLDNYQNISEDSYIDEVTDYVKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA
RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIYFETEYRTDISKNGFWGAVFF
TNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLDYGISKNDWSLRLGLAENF
>Mature_378_residues
MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVSFLTTFYLGDSDKTKMSQVSF
SPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDTYGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGL
LLDNYQNISEDSYIDEVTDYVKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA
RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIYFETEYRTDISKNGFWGAVFF
TNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLDYGISKNDWSLRLGLAENF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44286; Mature: 44286

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVS
CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEE
FLTTFYLGDSDKTKMSQVSFSPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDT
EEHHHEECCCCCCCHHEEECCHHHHHHHHHHEEEEEEEEECCCCEEEEEEEEEEEEECCC
YGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGLLLDNYQNISEDSYIDEVTDY
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHH
VKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA
HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEH
RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIY
HHHHHHHHHHHHHHEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCEEE
FETEYRTDISKNGFWGAVFFTNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLD
EEECCCCCCCCCCCEEEEEEECCCHHHHHHHEEEECCCCCCCCCEEEEECCCCCCEEEEE
YGISKNDWSLRLGLAENF
ECCCCCCCEEEEEECCCC
>Mature Secondary Structure
MQVCYCQNDSISRNNKDILDVLYKLFNKNDSLRKSEDKKIAFSLLPVPLDADKNTGLVVS
CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEE
FLTTFYLGDSDKTKMSQVSFSPYFSFTKQYVFPVQSYIYTKDNKWNFIGDYRYMIYPQDT
EEHHHEECCCCCCCHHEEECCHHHHHHHHHHEEEEEEEEECCCCEEEEEEEEEEEEECCC
YGLGGHNTDEKMSTLDYQQWRFYQFATRKVIGNFRLGLGLLLDNYQNISEDSYIDEVTDY
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHH
VKYMNGDFSDETSFGAAIQGLYDSRENNVNPEQGLYVEADYRINTSGVEGKKWNSIYFDA
HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEH
RKYHSFHKYKHRVLAYRAFYWSTFGGKPHYLDLPSIGWDRDGRTGRGFTRNRFRSNALIY
HHHHHHHHHHHHHHEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCEEE
FETEYRTDISKNGFWGAVFFTNISSVSKLETYQFKKWNPAIGTGLRIKWNKKNNSNLVLD
EEECCCCCCCCCCCEEEEEEECCCHHHHHHHEEEECCCCCCCCCEEEEECCCCCCEEEEE
YGISKNDWSLRLGLAENF
ECCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA