| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302702
Identifier: 146302702
GI number: 146302702
Start: 6014301
End: 6015572
Strand: Direct
Name: 146302702
Synonym: Fjoh_4975
Alternate gene names: NA
Gene position: 6014301-6015572 (Clockwise)
Preceding gene: 146302701
Following gene: 146302703
Centisome position: 98.65
GC content: 36.71
Gene sequence:
>1272_bases ATGGTAAAAGAACGCTTAATTTCGCTAGATGTCTTTCGTGGACTAACAATTTTATTAATGACAATCGTAAACAATCCCGG TGACTGGGGAAATGTTTATCCGCCATTATTACACGCCGAATGGCACGGCTGCACCCCAACTGATTTAGTATTTCCGTTTT TCATTTTCATCATGGGAGTTGCTGTTCCGCTTGCAATGCCTGATAAATTTTATGACAGCACAACATTCAATAAAATCTTA GTTCGTTCTTTACGAATGCTTTGTTTGGGGATTTTCTTTAACTTTTTTGGAAAAATCCAGCTATTTGGACTCGAAGGTAT TCCGCTTTTAATAGGCAGACTGGCAATAACCATTGCTGTAGGTTATGCCTTAATGGGAAGTTTTAGTTCAAAAGTCAAAA ACATTCTGGCATTTTCGATTCTGTTTATTTATCTGTTTTTAGCTTACAGTGGTATCGAAGCCTATCATGATGTAAGACTT CCGGGAGTTTTGCAGCGAATTGCAATTGTGTATTTTGTAGTTTCGCTTTTGTATTTAAAAACCTCTCAAAGAACCCAGAT CATAACCGGAATTGTTTTATTATTGGGTTATTGGGCAATCATGACTTTAATTCCTGTTCCCGGAATCGGCGAAGCCAATC TTGAAAAAGGGACCAATCTGGCTTCCTGGCTTGACAGCGTTTTGTTAAAAGGCCACATGTACCGCGGTACCATAACCTGG GATCCGGAGGGAATTTTAAGTACACTTCCATCAATCGTAAACGGAATTATTGGTTTACTAATCGGACAGGTTTTACAGCG TGATACAACTAAAATTCTAAAAGCCCAGAAAATGGGAATTGCAGGAACGATTCTTATATTTTTTGGATTAATGTGGGATT TGGTTTTTCCAATTAATAAGTCGCTTTGGACTAGCAGCTATGTTTTATATACAACAGGATTGGCAACAGTATTCCTGACA ATTTTATATTACACCATCGATATTGCAGATTATAAAAAAGGATTCAAACCATTTTTAATCTGGGGTGTAAATCCAATGAT TGTTTTCTTTACTTCTCAGATTATTCCACAGGCATTAGTAATGATCGAGTTTCAAAACCCGCATAATCCTTCAGAAAAAA TCAACTTATTAAATTATCTGTACAGCTTTTGCATTGCACCGTTTTTCAACAATCCAATGACTGCTTCACTCGCAGGCGCA TTAGTTTACGTGTGCATCTGGACCTTTATTTTGTGGATATTCTACAGAAACAAATTAATATTCAAAGTTTAA
Upstream 100 bases:
>100_bases AATGCTGAGAACCAAATAACCACCTATCTCTCTAAATTATTATTCTTCAAACCAAATAGCGATTTTTAAAATTATTAACT AACCAATTTACCCAAAACCA
Downstream 100 bases:
>100_bases AATTTTCATCATATATGTAGAGGCGCACAGTTGTGCGTCTTTTTTTTGGTTAAAACATCATTCTAACGTGTTTTAATTAC GAATTAATTAAAATCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MVKERLISLDVFRGLTILLMTIVNNPGDWGNVYPPLLHAEWHGCTPTDLVFPFFIFIMGVAVPLAMPDKFYDSTTFNKIL VRSLRMLCLGIFFNFFGKIQLFGLEGIPLLIGRLAITIAVGYALMGSFSSKVKNILAFSILFIYLFLAYSGIEAYHDVRL PGVLQRIAIVYFVVSLLYLKTSQRTQIITGIVLLLGYWAIMTLIPVPGIGEANLEKGTNLASWLDSVLLKGHMYRGTITW DPEGILSTLPSIVNGIIGLLIGQVLQRDTTKILKAQKMGIAGTILIFFGLMWDLVFPINKSLWTSSYVLYTTGLATVFLT ILYYTIDIADYKKGFKPFLIWGVNPMIVFFTSQIIPQALVMIEFQNPHNPSEKINLLNYLYSFCIAPFFNNPMTASLAGA LVYVCIWTFILWIFYRNKLIFKV
Sequences:
>Translated_423_residues MVKERLISLDVFRGLTILLMTIVNNPGDWGNVYPPLLHAEWHGCTPTDLVFPFFIFIMGVAVPLAMPDKFYDSTTFNKIL VRSLRMLCLGIFFNFFGKIQLFGLEGIPLLIGRLAITIAVGYALMGSFSSKVKNILAFSILFIYLFLAYSGIEAYHDVRL PGVLQRIAIVYFVVSLLYLKTSQRTQIITGIVLLLGYWAIMTLIPVPGIGEANLEKGTNLASWLDSVLLKGHMYRGTITW DPEGILSTLPSIVNGIIGLLIGQVLQRDTTKILKAQKMGIAGTILIFFGLMWDLVFPINKSLWTSSYVLYTTGLATVFLT ILYYTIDIADYKKGFKPFLIWGVNPMIVFFTSQIIPQALVMIEFQNPHNPSEKINLLNYLYSFCIAPFFNNPMTASLAGA LVYVCIWTFILWIFYRNKLIFKV >Mature_423_residues MVKERLISLDVFRGLTILLMTIVNNPGDWGNVYPPLLHAEWHGCTPTDLVFPFFIFIMGVAVPLAMPDKFYDSTTFNKIL VRSLRMLCLGIFFNFFGKIQLFGLEGIPLLIGRLAITIAVGYALMGSFSSKVKNILAFSILFIYLFLAYSGIEAYHDVRL PGVLQRIAIVYFVVSLLYLKTSQRTQIITGIVLLLGYWAIMTLIPVPGIGEANLEKGTNLASWLDSVLLKGHMYRGTITW DPEGILSTLPSIVNGIIGLLIGQVLQRDTTKILKAQKMGIAGTILIFFGLMWDLVFPINKSLWTSSYVLYTTGLATVFLT ILYYTIDIADYKKGFKPFLIWGVNPMIVFFTSQIIPQALVMIEFQNPHNPSEKINLLNYLYSFCIAPFFNNPMTASLAGA LVYVCIWTFILWIFYRNKLIFKV
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=473, Percent_Identity=27.061310782241, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24639786, Length=388, Percent_Identity=23.7113402061856, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47723; Mature: 47723
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKERLISLDVFRGLTILLMTIVNNPGDWGNVYPPLLHAEWHGCTPTDLVFPFFIFIMGV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH AVPLAMPDKFYDSTTFNKILVRSLRMLCLGIFFNFFGKIQLFGLEGIPLLIGRLAITIAV HHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHH GYALMGSFSSKVKNILAFSILFIYLFLAYSGIEAYHDVRLPGVLQRIAIVYFVVSLLYLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH TSQRTQIITGIVLLLGYWAIMTLIPVPGIGEANLEKGTNLASWLDSVLLKGHMYRGTITW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHCCCEEECEEEE DPEGILSTLPSIVNGIIGLLIGQVLQRDTTKILKAQKMGIAGTILIFFGLMWDLVFPINK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH SLWTSSYVLYTTGLATVFLTILYYTIDIADYKKGFKPFLIWGVNPMIVFFTSQIIPQALV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHE MIEFQNPHNPSEKINLLNYLYSFCIAPFFNNPMTASLAGALVYVCIWTFILWIFYRNKLI EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE FKV EEC >Mature Secondary Structure MVKERLISLDVFRGLTILLMTIVNNPGDWGNVYPPLLHAEWHGCTPTDLVFPFFIFIMGV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH AVPLAMPDKFYDSTTFNKILVRSLRMLCLGIFFNFFGKIQLFGLEGIPLLIGRLAITIAV HHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHH GYALMGSFSSKVKNILAFSILFIYLFLAYSGIEAYHDVRLPGVLQRIAIVYFVVSLLYLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH TSQRTQIITGIVLLLGYWAIMTLIPVPGIGEANLEKGTNLASWLDSVLLKGHMYRGTITW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHCCCEEECEEEE DPEGILSTLPSIVNGIIGLLIGQVLQRDTTKILKAQKMGIAGTILIFFGLMWDLVFPINK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH SLWTSSYVLYTTGLATVFLTILYYTIDIADYKKGFKPFLIWGVNPMIVFFTSQIIPQALV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHE MIEFQNPHNPSEKINLLNYLYSFCIAPFFNNPMTASLAGALVYVCIWTFILWIFYRNKLI EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE FKV EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA