| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302701
Identifier: 146302701
GI number: 146302701
Start: 6012597
End: 6014186
Strand: Direct
Name: 146302701
Synonym: Fjoh_4974
Alternate gene names: NA
Gene position: 6012597-6014186 (Clockwise)
Preceding gene: 146302698
Following gene: 146302702
Centisome position: 98.62
GC content: 32.01
Gene sequence:
>1590_bases ATGCCTACCGACTGTATCAGCTATCAAACCTCTGGATATTTTTCTAAATTGATACAAGATTATTTAGATCAAAAATCAGA ATTAAAAACGCTGTACAACCATTTTCCAACATTGGAAAATTTCGAAAAACAAATTGCCGAAAAAGCTTCGAATTTTGATA ACCATAACCGAATTGCATTAGTTAATACCTTAAAAAAGCAATATCAAAACATCGAAATCTCGGATTCGACCAAACAAAAC ATTGAGCTTTTAGCACTCGAAAATACTTTTACAATAACAACAGGGCATCAGTTAAACTTATTTAGCGGGCCTTTGTATTT CTTATACAAAATCATTTCGACCATTAATCTTACCAAAGAATTAAAATCGAAATATCCATCTTATAATTTTGTTCCCGTTT ATTGGATGGCAACAGAAGATCATGATTTTGAAGAAATCAATTATTTTAATTTTAAAGGAAAAAAATTCAGATGGAATAAA GAAAGTAATGGTCCGGTTGGCCGACTTTCAACTGAAGGTCTAGCTGAGTTTTTAGATATTTATTCCTTAGAATTAGGTTC GAGTACGAATGCCAATACTTTAAAAAAGCTTTTTGAAGACACTTATTTAAAACACGATAATCTGGCTGATGCAACCCGAT TTTTAGCCAACAGCTTATTTGCTAATTATGGTTTAGTAATTATAGATGCTGACGATGCTGATTTAAAACGTGCTTTTATT CCGTATGCCAAGGAAGAATTAGAAAAACAGACTTCATACAAAGCTGTTCAGGAAACAATTGAACAATTAAAAGAATATAC CGTTCAGGTAAATCCGCGTGAGATTAATTTGTTTTATATTGAAGACAATCTGCGCGAAAGAATCATTTTTGAAGAAGATA AATATTTTGTAAACAATACAAAAATCTCGTTTTCTAAAGATCAAATTCTTTCTGAATTAGAAAATCATCCTGAAAAATTC AGTCCAAATGTGATTATGCGTCCGCTTTATCAGGAAATAATCCTGCCTAATTTATGTTACATTGGCGGAGGCGGAGAAAT TGCTTATTGGCTGGAATTGAAATCATTTTTTGATGCCGTAAACATCACTTTTCCGATGATTTTAGTTCGTAACTCTGTTC TTTTGGCAACAGAAAAACAAGCTAAAAAAGCAGACCAGTTAAACTTAAGCTGGAAAGACCTTTTTACCAAACAAGAAAAT TTAGTAAACGCGATTACACATAAAATTTCTGCATTTCCAATTGACTTGACACCTCAAAAAGAAATATTGAAAACCCAATT TCAATATCTTTACGAATTAGCAGCTCAAACCGACAAATCGTTTTCTGGAGCTGTAAAAGCACAAGAAGTAAAACAAACAA AAGGTCTGGAAAATCTTGAAAAACGTTTATTAAAAGCGCAAAAAAGAAACCTGAGCGATCAATTGCAGCGCGTTATTGAT TTACAATGCGAACTGTTCCCAAATAACAGTCTGCAGGAACGTCAAAGTAATTTTTCTGAATTTTATCTGGAAAAAGGCGA ACAATTAGTACCGCTTTTATTACAGAAACTGAAACCTTTAGAAATGAATTTTAACATTATAACAATTTAA
Upstream 100 bases:
>100_bases TAAAATAAAAAGTAAAAATCAAATCATAAGCAATCGTTAAAACCGTTTTTAACTGTATATTTTCATTAAATTTACAGCTG TCAAAAATAAATTTAAAATT
Downstream 100 bases:
>100_bases AAAAATAAAGTAATAATGCTGAGAACCAAATAACCACCTATCTCTCTAAATTATTATTCTTCAAACCAAATAGCGATTTT TAAAATTATTAACTAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MPTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIALVNTLKKQYQNIEISDSTKQN IELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKELKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNK ESNGPVGRLSTEGLAEFLDIYSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFI PYAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNTKISFSKDQILSELENHPEKF SPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAVNITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQEN LVNAITHKISAFPIDLTPQKEILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVID LQCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI
Sequences:
>Translated_529_residues MPTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIALVNTLKKQYQNIEISDSTKQN IELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKELKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNK ESNGPVGRLSTEGLAEFLDIYSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFI PYAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNTKISFSKDQILSELENHPEKF SPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAVNITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQEN LVNAITHKISAFPIDLTPQKEILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVID LQCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI >Mature_528_residues PTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIALVNTLKKQYQNIEISDSTKQNI ELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKELKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNKE SNGPVGRLSTEGLAEFLDIYSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFIP YAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNTKISFSKDQILSELENHPEKFS PNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAVNITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQENL VNAITHKISAFPIDLTPQKEILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVIDL QCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI
Specific function: Unknown
COG id: COG4365
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0747 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4974_FLAJ1 (A5F9Z4)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001197292.1 - STRING: A5F9Z4 - GeneID: 5094244 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_4974 - eggNOG: COG4365 - HOGENOM: HBG479593 - OMA: TRPLMQE - ProtClustDB: CLSK847417 - BioCyc: FJOH376686:FJOH_4974-MONOMER - HAMAP: MF_01867 - InterPro: IPR011199 - PIRSF: PIRSF012535
Pfam domain/function: PF10079 DUF2317
EC number: NA
Molecular weight: Translated: 61541; Mature: 61410
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIAL CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEH VNTLKKQYQNIEISDSTKQNIELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKE HHHHHHHHCCCCCCCCCCCCEEEEEEECEEEEECCCEEEECCCHHHHHHHHHHHHHHHHH LKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNKESNGPVGRLSTEGLAEFLDI HHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHH YSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFI HHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHC PYAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNT CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEEEECCCCCCEEEECCCEEEECC KISFSKDQILSELENHPEKFSPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAV EEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHH NITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQENLVNAITHKISAFPIDLTPQK HHHHHHHHHHCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH EILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVID HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH LQCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEC >Mature Secondary Structure PTDCISYQTSGYFSKLIQDYLDQKSELKTLYNHFPTLENFEKQIAEKASNFDNHNRIAL CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEH VNTLKKQYQNIEISDSTKQNIELLALENTFTITTGHQLNLFSGPLYFLYKIISTINLTKE HHHHHHHHCCCCCCCCCCCCEEEEEEECEEEEECCCEEEECCCHHHHHHHHHHHHHHHHH LKSKYPSYNFVPVYWMATEDHDFEEINYFNFKGKKFRWNKESNGPVGRLSTEGLAEFLDI HHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHH YSLELGSSTNANTLKKLFEDTYLKHDNLADATRFLANSLFANYGLVIIDADDADLKRAFI HHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHC PYAKEELEKQTSYKAVQETIEQLKEYTVQVNPREINLFYIEDNLRERIIFEEDKYFVNNT CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEEEECCCCCCEEEECCCEEEECC KISFSKDQILSELENHPEKFSPNVIMRPLYQEIILPNLCYIGGGGEIAYWLELKSFFDAV EEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHH NITFPMILVRNSVLLATEKQAKKADQLNLSWKDLFTKQENLVNAITHKISAFPIDLTPQK HHHHHHHHHHCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH EILKTQFQYLYELAAQTDKSFSGAVKAQEVKQTKGLENLEKRLLKAQKRNLSDQLQRVID HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH LQCELFPNNSLQERQSNFSEFYLEKGEQLVPLLLQKLKPLEMNFNIITI CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA