| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302464
Identifier: 146302464
GI number: 146302464
Start: 5726834
End: 5727469
Strand: Direct
Name: 146302464
Synonym: Fjoh_4737
Alternate gene names: NA
Gene position: 5726834-5727469 (Clockwise)
Preceding gene: 146302463
Following gene: 146302465
Centisome position: 93.93
GC content: 24.84
Gene sequence:
>636_bases ATGATATATCTTTATGAGATAATATTACTTATAACACTATTAAAATCAATAGTTTTGGCTAGAAAATTTAGTCTTTCTAG CCAGAACTATTTGTTTGTATATCTTCTTATTACCTTCCTTATAGAATTATCTTCATGGATAATTATTTTAATTAAAAAAG ATTGGAGTTTTCAGTATACATTATATTGCATATTCTGTATTGCATTTTTCTGGTTTTATTATGCTCAGTCATTTCAAAAA AAATTAAGAAAGAAATTTCACTTTGTATCTGGTTTAAGCTCTTTAAGCGTTTTATTATTCTCATTTTTTTCAAAGGAAGA AATAGGTTCTTTGTTAATAATAGCATTACCTATTTTTTATATTGTATTTAGCATATTTTGGTTCTATCAAAAAATTGCTT TGCCTTCAGAATCTAAAATTACAAACGATCCTAATTTTTGGATTTCGACAGGTTTACTTCTTTGGAGTTGTTTTTTTATC TTTAGAGTTGTTCCAAGAGATTTTTTTAATATCGAAGATCAGCCTTTTTTAGAATTACTCAGAGAATTTTTATATGCGAT AAACTGCGTTATGTATCTTTTATTTTTTAAAGCTTTAATTGAATACGAGACAATCGCAAAAAACATAAAAAAATGA
Upstream 100 bases:
>100_bases GAGACAAAAGAATTGCTTTCTGCGTTCATGCCATATTTGACAAGAAGAACAACTTGTATAGTGAAGGCGATGGTTACGAT CTAGGAAACCTTAGACCTTA
Downstream 100 bases:
>100_bases GAGAACTGCCCCCAGAAATAAAATTAACCTACATTATCGCCATTATCATAATGCTGATGTTTGTGTGCTTCATTATTATG ATGGTCTTTATTTACAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MIYLYEIILLITLLKSIVLARKFSLSSQNYLFVYLLITFLIELSSWIIILIKKDWSFQYTLYCIFCIAFFWFYYAQSFQK KLRKKFHFVSGLSSLSVLLFSFFSKEEIGSLLIIALPIFYIVFSIFWFYQKIALPSESKITNDPNFWISTGLLLWSCFFI FRVVPRDFFNIEDQPFLELLREFLYAINCVMYLLFFKALIEYETIAKNIKK
Sequences:
>Translated_211_residues MIYLYEIILLITLLKSIVLARKFSLSSQNYLFVYLLITFLIELSSWIIILIKKDWSFQYTLYCIFCIAFFWFYYAQSFQK KLRKKFHFVSGLSSLSVLLFSFFSKEEIGSLLIIALPIFYIVFSIFWFYQKIALPSESKITNDPNFWISTGLLLWSCFFI FRVVPRDFFNIEDQPFLELLREFLYAINCVMYLLFFKALIEYETIAKNIKK >Mature_211_residues MIYLYEIILLITLLKSIVLARKFSLSSQNYLFVYLLITFLIELSSWIIILIKKDWSFQYTLYCIFCIAFFWFYYAQSFQK KLRKKFHFVSGLSSLSVLLFSFFSKEEIGSLLIIALPIFYIVFSIFWFYQKIALPSESKITNDPNFWISTGLLLWSCFFI FRVVPRDFFNIEDQPFLELLREFLYAINCVMYLLFFKALIEYETIAKNIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25368; Mature: 25368
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLYEIILLITLLKSIVLARKFSLSSQNYLFVYLLITFLIELSSWIIILIKKDWSFQYT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHH LYCIFCIAFFWFYYAQSFQKKLRKKFHFVSGLSSLSVLLFSFFSKEEIGSLLIIALPIFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVFSIFWFYQKIALPSESKITNDPNFWISTGLLLWSCFFIFRVVPRDFFNIEDQPFLELL HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH REFLYAINCVMYLLFFKALIEYETIAKNIKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIYLYEIILLITLLKSIVLARKFSLSSQNYLFVYLLITFLIELSSWIIILIKKDWSFQYT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHH LYCIFCIAFFWFYYAQSFQKKLRKKFHFVSGLSSLSVLLFSFFSKEEIGSLLIIALPIFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVFSIFWFYQKIALPSESKITNDPNFWISTGLLLWSCFFIFRVVPRDFFNIEDQPFLELL HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH REFLYAINCVMYLLFFKALIEYETIAKNIKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA