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The map label for this gene is ydfH [H]

Identifier: 146302465

GI number: 146302465

Start: 5727466

End: 5728260

Strand: Direct

Name: ydfH [H]

Synonym: Fjoh_4738

Alternate gene names: 146302465

Gene position: 5727466-5728260 (Clockwise)

Preceding gene: 146302464

Following gene: 146302466

Centisome position: 93.94

GC content: 34.47

Gene sequence:

>795_bases
ATGAGAGAACTGCCCCCAGAAATAAAATTAACCTACATTATCGCCATTATCATAATGCTGATGTTTGTGTGCTTCATTAT
TATGATGGTCTTTATTTACAACAAAAAACAGCTGATTCAGCAGCAGGAAAATCAAATAAAAGAAAGCGAATTCCAGAACC
AATTACTGCAAAAAGAATTAGAACGCCAAAAAGCCATTCAGCTCGAAAGAGAACGTATTTCGCAAGATATGCACGATGAT
CTGGGTGCGGGAATTTCGGCTATAAAACTTCAGGCCGAATTTTTAAAATATAAAATGCCTCAGGAAAGTTTTTCTGAAGA
TTTAGAAGCCATAATAAATACTTCTGAAGATATGAATTTAGCCATGCGCGAAATTCTTTGGAGTTTGAACTCGCAAAACG
ATACTGTTGGTAATTTTATAGAATATACGACTTTGTATATCAAACGTTTCCTAAGTAAAACGAGTATCGATTCGCATTTC
AAATTGAATGTTCCCGAAAAGGAAACGAATCTAACGGTAAAAGCCAGACGGAATCTTTTTTTAGCAGTTAAAGAAGCAGT
TCACAATATATACAAACACAGCCAGGCAAGTGAGATTTTTATTGAATTTGACCAAAATGAAGATTCTTTCAGTATTACGA
TTATCGATAACGGAATTGGATTATCTGAAACCACACAAAAGGGAAACGGCATGAGTAATATGTCCTTAAGAATGGAAAGC
ATAAACGGAACTTTTAAAATTATTCCTGCTCAAAAAGGTCTTCGGTTATTGTTTGTGTATCCATTACAGGATTAA

Upstream 100 bases:

>100_bases
AATTACTCAGAGAATTTTTATATGCGATAAACTGCGTTATGTATCTTTTATTTTTTAAAGCTTTAATTGAATACGAGACA
ATCGCAAAAAACATAAAAAA

Downstream 100 bases:

>100_bases
AAAGGTTTTCTCCTGTTAAGTCGTCACTTATAAATGTTTCTTCACTTTTGATTTGCTTGCCTGACTTAAGCGTTCTACCT
GCGCTCTGGCTTTTTCTAAG

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRELPPEIKLTYIIAIIIMLMFVCFIIMMVFIYNKKQLIQQQENQIKESEFQNQLLQKELERQKAIQLERERISQDMHDD
LGAGISAIKLQAEFLKYKMPQESFSEDLEAIINTSEDMNLAMREILWSLNSQNDTVGNFIEYTTLYIKRFLSKTSIDSHF
KLNVPEKETNLTVKARRNLFLAVKEAVHNIYKHSQASEIFIEFDQNEDSFSITIIDNGIGLSETTQKGNGMSNMSLRMES
INGTFKIIPAQKGLRLLFVYPLQD

Sequences:

>Translated_264_residues
MRELPPEIKLTYIIAIIIMLMFVCFIIMMVFIYNKKQLIQQQENQIKESEFQNQLLQKELERQKAIQLERERISQDMHDD
LGAGISAIKLQAEFLKYKMPQESFSEDLEAIINTSEDMNLAMREILWSLNSQNDTVGNFIEYTTLYIKRFLSKTSIDSHF
KLNVPEKETNLTVKARRNLFLAVKEAVHNIYKHSQASEIFIEFDQNEDSFSITIIDNGIGLSETTQKGNGMSNMSLRMES
INGTFKIIPAQKGLRLLFVYPLQD
>Mature_264_residues
MRELPPEIKLTYIIAIIIMLMFVCFIIMMVFIYNKKQLIQQQENQIKESEFQNQLLQKELERQKAIQLERERISQDMHDD
LGAGISAIKLQAEFLKYKMPQESFSEDLEAIINTSEDMNLAMREILWSLNSQNDTVGNFIEYTTLYIKRFLSKTSIDSHF
KLNVPEKETNLTVKARRNLFLAVKEAVHNIYKHSQASEIFIEFDQNEDSFSITIIDNGIGLSETTQKGNGMSNMSLRMES
INGTFKIIPAQKGLRLLFVYPLQD

Specific function: Member of the two-component regulatory system ydfH/ydfI. May activate ydfI by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1787474, Length=209, Percent_Identity=27.7511961722488, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 30690; Mature: 30690

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELPPEIKLTYIIAIIIMLMFVCFIIMMVFIYNKKQLIQQQENQIKESEFQNQLLQKEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
ERQKAIQLERERISQDMHDDLGAGISAIKLQAEFLKYKMPQESFSEDLEAIINTSEDMNL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
AMREILWSLNSQNDTVGNFIEYTTLYIKRFLSKTSIDSHFKLNVPEKETNLTVKARRNLF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHCEEEEHHHHHH
LAVKEAVHNIYKHSQASEIFIEFDQNEDSFSITIIDNGIGLSETTQKGNGMSNMSLRMES
HHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHEEEEE
INGTFKIIPAQKGLRLLFVYPLQD
CCCEEEEEECCCCCEEEEEEECCC
>Mature Secondary Structure
MRELPPEIKLTYIIAIIIMLMFVCFIIMMVFIYNKKQLIQQQENQIKESEFQNQLLQKEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
ERQKAIQLERERISQDMHDDLGAGISAIKLQAEFLKYKMPQESFSEDLEAIINTSEDMNL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
AMREILWSLNSQNDTVGNFIEYTTLYIKRFLSKTSIDSHFKLNVPEKETNLTVKARRNLF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHCEEEEHHHHHH
LAVKEAVHNIYKHSQASEIFIEFDQNEDSFSITIIDNGIGLSETTQKGNGMSNMSLRMES
HHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHEEEEE
INGTFKIIPAQKGLRLLFVYPLQD
CCCEEEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]