| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302463
Identifier: 146302463
GI number: 146302463
Start: 5726187
End: 5726834
Strand: Direct
Name: 146302463
Synonym: Fjoh_4736
Alternate gene names: NA
Gene position: 5726187-5726834 (Clockwise)
Preceding gene: 146302462
Following gene: 146302464
Centisome position: 93.92
GC content: 27.78
Gene sequence:
>648_bases ATGGAACTAGAAAAATTAAAACAAGAAAAAATCGATGTAATTGATTTTGCAAAAAAAATTGATAGAGAAATCGAAAATCT TTTTGTCGAGAACTACCAAAAATTAAGGATTGATGGATTAACAGAAACCTTTTTTATAGATTTAGAAATCTTTAAAGAGT TACTTATTAAAAATGAAAACAAAAAGTTTTGTAAGTTTTATTATATCCAAAAAGGTAAGGCTTTATATTTAGGATTATCT TTTTCAGATAATGATCAATGCCCAATTAAAAGTGATGACAAAAAATATATTTTAGATGATAAATCTATCATAGAAGAAGG TGATTTTACAAATTTGAAAGATAATTTTGTGAATGGTATAGGAGCTAAATTACCTACTCATCCTGAAAATAAGAAAGACA CATTAATCTCATATTCTATGGAAGAAATTAATAAATACTTAGGCGAAATGAAAAAAGTACATCCTAGCATTTCTGCCTTA AAATTTAACATGTTTCAGTATTCCCCGGTTAGTGCAGATCATGAATTTTCTGCACATTTTATAGATAGAGACAAAAGAAT TGCTTTCTGCGTTCATGCCATATTTGACAAGAAGAACAACTTGTATAGTGAAGGCGATGGTTACGATCTAGGAAACCTTA GACCTTAA
Upstream 100 bases:
>100_bases CGACACTATAAAAAAACACATTGGCAATATCTACAGAAAATTACAAGTAAGTAATAAAATTGAAGCTATTAATAAGTTTA ACACCAAAAACTAACAAATC
Downstream 100 bases:
>100_bases TGATATATCTTTATGAGATAATATTACTTATAACACTATTAAAATCAATAGTTTTGGCTAGAAAATTTAGTCTTTCTAGC CAGAACTATTTGTTTGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MELEKLKQEKIDVIDFAKKIDREIENLFVENYQKLRIDGLTETFFIDLEIFKELLIKNENKKFCKFYYIQKGKALYLGLS FSDNDQCPIKSDDKKYILDDKSIIEEGDFTNLKDNFVNGIGAKLPTHPENKKDTLISYSMEEINKYLGEMKKVHPSISAL KFNMFQYSPVSADHEFSAHFIDRDKRIAFCVHAIFDKKNNLYSEGDGYDLGNLRP
Sequences:
>Translated_215_residues MELEKLKQEKIDVIDFAKKIDREIENLFVENYQKLRIDGLTETFFIDLEIFKELLIKNENKKFCKFYYIQKGKALYLGLS FSDNDQCPIKSDDKKYILDDKSIIEEGDFTNLKDNFVNGIGAKLPTHPENKKDTLISYSMEEINKYLGEMKKVHPSISAL KFNMFQYSPVSADHEFSAHFIDRDKRIAFCVHAIFDKKNNLYSEGDGYDLGNLRP >Mature_215_residues MELEKLKQEKIDVIDFAKKIDREIENLFVENYQKLRIDGLTETFFIDLEIFKELLIKNENKKFCKFYYIQKGKALYLGLS FSDNDQCPIKSDDKKYILDDKSIIEEGDFTNLKDNFVNGIGAKLPTHPENKKDTLISYSMEEINKYLGEMKKVHPSISAL KFNMFQYSPVSADHEFSAHFIDRDKRIAFCVHAIFDKKNNLYSEGDGYDLGNLRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25152; Mature: 25152
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEKLKQEKIDVIDFAKKIDREIENLFVENYQKLRIDGLTETFFIDLEIFKELLIKNEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHCCCC KKFCKFYYIQKGKALYLGLSFSDNDQCPIKSDDKKYILDDKSIIEEGDFTNLKDNFVNGI CCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHC GAKLPTHPENKKDTLISYSMEEINKYLGEMKKVHPSISALKFNMFQYSPVSADHEFSAHF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCCCCCHHHH IDRDKRIAFCVHAIFDKKNNLYSEGDGYDLGNLRP HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MELEKLKQEKIDVIDFAKKIDREIENLFVENYQKLRIDGLTETFFIDLEIFKELLIKNEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHCCCC KKFCKFYYIQKGKALYLGLSFSDNDQCPIKSDDKKYILDDKSIIEEGDFTNLKDNFVNGI CCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHC GAKLPTHPENKKDTLISYSMEEINKYLGEMKKVHPSISALKFNMFQYSPVSADHEFSAHF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCCCCCHHHH IDRDKRIAFCVHAIFDKKNNLYSEGDGYDLGNLRP HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA