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The map label for this gene is 146302375

Identifier: 146302375

GI number: 146302375

Start: 5621434

End: 5622504

Strand: Direct

Name: 146302375

Synonym: Fjoh_4648

Alternate gene names: NA

Gene position: 5621434-5622504 (Clockwise)

Preceding gene: 146302374

Following gene: 146302376

Centisome position: 92.2

GC content: 38.47

Gene sequence:

>1071_bases
ATGGCAATAGTTCAAAAAGAAAAATTAACAAGAGATTTAACGATCAGTTTTTTTATTTATTCACTGCCGGTAGCGGCAAT
TTACCTTTATTTTAAGTTAACGGGCGGAGCGGTAAGCGAATCGCATATTACACTGCCTTCGTTTTTAGAATTTGCAAAAC
CGGCATTCGAAAATATCCGCACCTGGGGATTAACCGTTTTCATGGTAGTTTTGGGAATTATAGAATTTGCGGCTGGTTTA
TATGATGATGAATGGACTGGTGAAGAACGTAAAATAGACATTGTTTGTTTCTTAGCTCCAAAATTGCTTTTACCGCCTGT
AATTGCTTTTTTCAGTTTAACAGCCTTACCTTATTTATTGCCAGATGCAGCAAATGCATTATCATGGGTTCCGTTTTGGG
GAGGCTTCTTCTTAATCGCAATTGCCGATGATTTAACGCAGTACTGGTACCACAGATTACACCATCAGGTTCCGTTTTTA
TGGCGTTTTCACAGAACGCACCATTCAGCTCCGTACATGGGAATGGCAATGGCATCCAGACAAAACTTTATTTATACAAT
TTTCTTTTCGCAGATTTATTTAACTGCAACCTTAACCTATTTAGGTTTAGGATTACCGGCTTTATTTGTTTTGGTAATTA
AAAGTTTCATCACATTAGGAGCGCATTCTAGTATTGCCTGGGACAAACCATTTTACAAATACAAAGTTTTACATCCAATT
GCATGGGTTTTAGAAAGATTGATTTCTACTCCGGCAACACACCACGCACATCACGCCGATACAAGCGGAGACGGTGTTGG
TCATTTTAAAGGAAATTTTGGAAACATGTTTTTCATTTGGGACATGATTTTCGGAACCGGATTAATCACTCGTAAATTCC
CGGAATCTTACGGAACAAAATCATACAAACAAGAAGAATGGTACGCACAATTTTTATGGCCGATATTCAAATCTAAAAAA
GAAGGAAGTTCTCTTGCCGAAGGCGTATTGTCATTTCCGTTAAAAGCCAAACCAGTCGAAAATGCTGTTGAGCAGCCAGT
TGAACAAACGCCGGTTTTAGAGCAGGCATAA

Upstream 100 bases:

>100_bases
AGGAAAGAAGATTGTAGTAGGAGCAATTTTATTTCTGGTTCCACTGGTAATTTTAGCCGGGGGTTTAGTATTAATTAATC
AATTTTTAAAATAAGAAATC

Downstream 100 bases:

>100_bases
TCTTCAAAAAATTAAGTAAACATAAAGTACGGCAGTGTATTCAAAATTAACCTTGAATACGCTGCCCGCTTTTATCAAAA
CCTTTTCATTATGAAAAATA

Product: sterol desaturase-like protein

Products: NA

Alternate protein names: Sterol Desaturase Family Protein; Sterol Desaturase; Sterol Desaturase-Like Protein

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MAIVQKEKLTRDLTISFFIYSLPVAAIYLYFKLTGGAVSESHITLPSFLEFAKPAFENIRTWGLTVFMVVLGIIEFAAGL
YDDEWTGEERKIDIVCFLAPKLLLPPVIAFFSLTALPYLLPDAANALSWVPFWGGFFLIAIADDLTQYWYHRLHHQVPFL
WRFHRTHHSAPYMGMAMASRQNFIYTIFFSQIYLTATLTYLGLGLPALFVLVIKSFITLGAHSSIAWDKPFYKYKVLHPI
AWVLERLISTPATHHAHHADTSGDGVGHFKGNFGNMFFIWDMIFGTGLITRKFPESYGTKSYKQEEWYAQFLWPIFKSKK
EGSSLAEGVLSFPLKAKPVENAVEQPVEQTPVLEQA

Sequences:

>Translated_356_residues
MAIVQKEKLTRDLTISFFIYSLPVAAIYLYFKLTGGAVSESHITLPSFLEFAKPAFENIRTWGLTVFMVVLGIIEFAAGL
YDDEWTGEERKIDIVCFLAPKLLLPPVIAFFSLTALPYLLPDAANALSWVPFWGGFFLIAIADDLTQYWYHRLHHQVPFL
WRFHRTHHSAPYMGMAMASRQNFIYTIFFSQIYLTATLTYLGLGLPALFVLVIKSFITLGAHSSIAWDKPFYKYKVLHPI
AWVLERLISTPATHHAHHADTSGDGVGHFKGNFGNMFFIWDMIFGTGLITRKFPESYGTKSYKQEEWYAQFLWPIFKSKK
EGSSLAEGVLSFPLKAKPVENAVEQPVEQTPVLEQA
>Mature_355_residues
AIVQKEKLTRDLTISFFIYSLPVAAIYLYFKLTGGAVSESHITLPSFLEFAKPAFENIRTWGLTVFMVVLGIIEFAAGLY
DDEWTGEERKIDIVCFLAPKLLLPPVIAFFSLTALPYLLPDAANALSWVPFWGGFFLIAIADDLTQYWYHRLHHQVPFLW
RFHRTHHSAPYMGMAMASRQNFIYTIFFSQIYLTATLTYLGLGLPALFVLVIKSFITLGAHSSIAWDKPFYKYKVLHPIA
WVLERLISTPATHHAHHADTSGDGVGHFKGNFGNMFFIWDMIFGTGLITRKFPESYGTKSYKQEEWYAQFLWPIFKSKKE
GSSLAEGVLSFPLKAKPVENAVEQPVEQTPVLEQA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40538; Mature: 40407

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVQKEKLTRDLTISFFIYSLPVAAIYLYFKLTGGAVSESHITLPSFLEFAKPAFENIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHH
TWGLTVFMVVLGIIEFAAGLYDDEWTGEERKIDIVCFLAPKLLLPPVIAFFSLTALPYLL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHC
PDAANALSWVPFWGGFFLIAIADDLTQYWYHRLHHQVPFLWRFHRTHHSAPYMGMAMASR
CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCC
QNFIYTIFFSQIYLTATLTYLGLGLPALFVLVIKSFITLGAHSSIAWDKPFYKYKVLHPI
CCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AWVLERLISTPATHHAHHADTSGDGVGHFKGNFGNMFFIWDMIFGTGLITRKFPESYGTK
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCHHHCCC
SYKQEEWYAQFLWPIFKSKKEGSSLAEGVLSFPLKAKPVENAVEQPVEQTPVLEQA
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHCCHHHCCCCCCC
>Mature Secondary Structure 
AIVQKEKLTRDLTISFFIYSLPVAAIYLYFKLTGGAVSESHITLPSFLEFAKPAFENIR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHH
TWGLTVFMVVLGIIEFAAGLYDDEWTGEERKIDIVCFLAPKLLLPPVIAFFSLTALPYLL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHC
PDAANALSWVPFWGGFFLIAIADDLTQYWYHRLHHQVPFLWRFHRTHHSAPYMGMAMASR
CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCC
QNFIYTIFFSQIYLTATLTYLGLGLPALFVLVIKSFITLGAHSSIAWDKPFYKYKVLHPI
CCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AWVLERLISTPATHHAHHADTSGDGVGHFKGNFGNMFFIWDMIFGTGLITRKFPESYGTK
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCHHHCCC
SYKQEEWYAQFLWPIFKSKKEGSSLAEGVLSFPLKAKPVENAVEQPVEQTPVLEQA
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA