| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is trxA [C]
Identifier: 146302376
GI number: 146302376
Start: 5622595
End: 5623311
Strand: Direct
Name: trxA [C]
Synonym: Fjoh_4649
Alternate gene names: 146302376
Gene position: 5622595-5623311 (Clockwise)
Preceding gene: 146302375
Following gene: 146302377
Centisome position: 92.22
GC content: 36.12
Gene sequence:
>717_bases ATGAAAAATAATAAAATCAAAAACAGCATTACAGCCTTGATTCTGCTTTTTGCAATCACAGCATTTTCGCAGAATAAAAG CTCCAATACCGTTTCGCTTGATATTTTCTACAGCAAAATTCAGGCAGAAAAAAAGCCTCAGATAATTGATGCACGAGGTC CCGAAGAATTTGCTTTAAACCATATTAACGGCGCAGTAAACTTCAATTTAGAATCAAAAAATTATGCCGAACAAGTTGCA AAACTAGACAAATCAAAACCTGTTTTCACCTACTCCATTGGAGCAGGAAGAAGCGTTTGGCTCGCCGATGAATTATTAAA AAACGGTTTTAAAGAAGCTTATAGTCTGGAAGGCGGTATTGCCAACTGGATTGGAAACGGAAAACCCTTTTATGCCAGTT CCAAAAGCAAATTAACTCTTACGGAATACACTAAAATCGTTGCTGACAACAAAACTGTTTTGGTCGACATTGGATCGAAA TACTGCAGCGCATGCACAAAAGTAAAGCCCGTTTTAGAAACGATCAAAACACAATACGGCGAGAATTTAAAAATCGTAGA AATTGATCTCGAAACCAGTCCGCAGGTAATTGCCGACTTAAAAACGATTAAAGTTTTTCCAACTCTGATATTATATCAAA ATGGCAAAATTGTTTTCAAAAAAGACGGCTTCAACGATTTAAAAAAAGATGTTGATGTGGCTTTGGCTTCTAAATAA
Upstream 100 bases:
>100_bases GCAGGCATAATCTTCAAAAAATTAAGTAAACATAAAGTACGGCAGTGTATTCAAAATTAACCTTGAATACGCTGCCCGCT TTTATCAAAACCTTTTCATT
Downstream 100 bases:
>100_bases ACTTAATTCAAAACTAAACTAACCATAATGGCAGTCTATAAAAAAATAACCAAAATTGTAATATCCATTTTAATAGTGCT TCTTATTCTGGCAGCATTTT
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Thioredoxin Family Protein; Rhodanese Domain-Containing Protein; Thioredoxin
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALNHINGAVNFNLESKNYAEQVA KLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGIANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSK YCSACTKVKPVLETIKTQYGENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK
Sequences:
>Translated_238_residues MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALNHINGAVNFNLESKNYAEQVA KLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGIANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSK YCSACTKVKPVLETIKTQYGENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK >Mature_238_residues MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALNHINGAVNFNLESKNYAEQVA KLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGIANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSK YCSACTKVKPVLETIKTQYGENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK
Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26342; Mature: 26342
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHCCCCCCEEECCCCHHHHHH HINGAVNFNLESKNYAEQVAKLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGI HCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCH ANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSKYCSACTKVKPVLETIKTQYG HHHCCCCCCEEECCCCEEEHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHC ENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK CCEEEEEEECCCCCHHHHHHHHHEEEEEEEEEECCEEEEEECCCHHHHHHHCEEECCC >Mature Secondary Structure MKNNKIKNSITALILLFAITAFSQNKSSNTVSLDIFYSKIQAEKKPQIIDARGPEEFALN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHCCCCCCEEECCCCHHHHHH HINGAVNFNLESKNYAEQVAKLDKSKPVFTYSIGAGRSVWLADELLKNGFKEAYSLEGGI HCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCH ANWIGNGKPFYASSKSKLTLTEYTKIVADNKTVLVDIGSKYCSACTKVKPVLETIKTQYG HHHCCCCCCEEECCCCEEEHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHC ENLKIVEIDLETSPQVIADLKTIKVFPTLILYQNGKIVFKKDGFNDLKKDVDVALASK CCEEEEEEECCCCCHHHHHHHHHEEEEEEEEEECCEEEEEECCCHHHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA