| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302349
Identifier: 146302349
GI number: 146302349
Start: 5585714
End: 5586997
Strand: Direct
Name: 146302349
Synonym: Fjoh_4622
Alternate gene names: NA
Gene position: 5585714-5586997 (Clockwise)
Preceding gene: 146302348
Following gene: 146302351
Centisome position: 91.62
GC content: 37.93
Gene sequence:
>1284_bases ATGGCTGAGCAATCTTCAATTCAGTGTCCAAACTGCGGAACTCCTATCGATGTCAATGATGTATTAAAACATCAGTTGGA AGACAGCATCCGTAAAGAATTCCAGCAAAAAGCGACTATTCAAAATCGTGAATTAGAGCTTAAAAACGAACAATTGGACA AAGCCAAAGCCGAATTTGAAGCGAAAAAGAAACAAGAAAATGAACTTTTTGCAGAACGCTTAGAGCGCGAGAAAAAAACG GCTGAAAAAGAAATCTCTGAAAAACTAAAAGCCAAGCTCGAAGAAGAAAACAAAGATCGTTTGTTATTGATGGAAAAAGA ACTCTCTGAAAAATCGGAAAAAATCAGGGAATTAAATAAAATGGAAGGTGAAATCGCCAAATTACAACGCGAAAAACTGG AAATGAAAGATGCTATTCAGGCCGAAGCCGAAAAACAATTGAACACACAATTGGCTTTGGAACGCGAAAAAATCAGAAAG CAGGAAGACGATAAAAACGAGTTAAAATTTAAAGAACTTCAAAAGCAATTAGAAGAACAGAAAAAATTAACCGAAGAAAT GAAACGCAAGCAGGAACAAGGTTCTATGCAATTGCAAGGTGAAGTAATGGAATTAGCTATCGAAGAATGGCTGGCAAACA ATTTCCCTCTTGACAGCATTGACGAAGTTAAAAAAGGGGCAAACGGCGCTGATTGCCTTCAAATAGTCAACACTCGCGAA CACCAAAATTGCGGTTCTATTTATTACGAAAGTAAAAGAACAAAAGCTTTTCAGCCTTCGTGGATTGAGAAATTCAAAAA CGATATCAGAACCAAACGAGCCAACATTGGAGTTCTGGTTACCGAAGTAATGCCAAACGGAATGGAACGAATGGGCATGC GCGACGGTATCTGGATTTGTACCTACGAAGAATTTAAAGGTTTAAGTGCTGTTTTACGTCAGTCCTTGATTCAAATAAAT CAAGCTGTTCAGGCTCAGGAAAACAAAGGCGATAAAATGTCAATGTTGTATGATTTCCTGACCAGCAACGAATTCCGTTT ACAGATTGAAGGAATTGTAGAAGGTTTTACGCAAATGCAAAGTGATCTCGATTCTGAAAAAAGAGCCATGCAGAGAATCT GGAAACAGCGAGAAAAACAAATCGAAAAAGTAGTTCACAATACTTTAGGAATGTACGGTTCGATTCGCGGTATTGCCGGA AATGCAGTTCAGAGTGTAAGAGCCTTAGAATTGGATTTTATTGAAGGTAATGACGAAGAGGAAGAAACTAAGGAACTAGA ATAA
Upstream 100 bases:
>100_bases CAAAAAATCGTTACAATTTAGTACAGCAATCCACATTATAAAAAGAGAACTTTTAAATACCTTAGCAAATTATAATTCTA CAATAAAAATTTCAATAAAA
Downstream 100 bases:
>100_bases ATCCTTCGACTTCGCTCAGGAAGACAAACGAAATGTCAGGCTGAGCGAAGTCGAAGCCCTTATAAAACTAATCCACCTTC TTAAAAACCAAAAGTTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MAEQSSIQCPNCGTPIDVNDVLKHQLEDSIRKEFQQKATIQNRELELKNEQLDKAKAEFEAKKKQENELFAERLEREKKT AEKEISEKLKAKLEEENKDRLLLMEKELSEKSEKIRELNKMEGEIAKLQREKLEMKDAIQAEAEKQLNTQLALEREKIRK QEDDKNELKFKELQKQLEEQKKLTEEMKRKQEQGSMQLQGEVMELAIEEWLANNFPLDSIDEVKKGANGADCLQIVNTRE HQNCGSIYYESKRTKAFQPSWIEKFKNDIRTKRANIGVLVTEVMPNGMERMGMRDGIWICTYEEFKGLSAVLRQSLIQIN QAVQAQENKGDKMSMLYDFLTSNEFRLQIEGIVEGFTQMQSDLDSEKRAMQRIWKQREKQIEKVVHNTLGMYGSIRGIAG NAVQSVRALELDFIEGNDEEEETKELE
Sequences:
>Translated_427_residues MAEQSSIQCPNCGTPIDVNDVLKHQLEDSIRKEFQQKATIQNRELELKNEQLDKAKAEFEAKKKQENELFAERLEREKKT AEKEISEKLKAKLEEENKDRLLLMEKELSEKSEKIRELNKMEGEIAKLQREKLEMKDAIQAEAEKQLNTQLALEREKIRK QEDDKNELKFKELQKQLEEQKKLTEEMKRKQEQGSMQLQGEVMELAIEEWLANNFPLDSIDEVKKGANGADCLQIVNTRE HQNCGSIYYESKRTKAFQPSWIEKFKNDIRTKRANIGVLVTEVMPNGMERMGMRDGIWICTYEEFKGLSAVLRQSLIQIN QAVQAQENKGDKMSMLYDFLTSNEFRLQIEGIVEGFTQMQSDLDSEKRAMQRIWKQREKQIEKVVHNTLGMYGSIRGIAG NAVQSVRALELDFIEGNDEEEETKELE >Mature_426_residues AEQSSIQCPNCGTPIDVNDVLKHQLEDSIRKEFQQKATIQNRELELKNEQLDKAKAEFEAKKKQENELFAERLEREKKTA EKEISEKLKAKLEEENKDRLLLMEKELSEKSEKIRELNKMEGEIAKLQREKLEMKDAIQAEAEKQLNTQLALEREKIRKQ EDDKNELKFKELQKQLEEQKKLTEEMKRKQEQGSMQLQGEVMELAIEEWLANNFPLDSIDEVKKGANGADCLQIVNTREH QNCGSIYYESKRTKAFQPSWIEKFKNDIRTKRANIGVLVTEVMPNGMERMGMRDGIWICTYEEFKGLSAVLRQSLIQINQ AVQAQENKGDKMSMLYDFLTSNEFRLQIEGIVEGFTQMQSDLDSEKRAMQRIWKQREKQIEKVVHNTLGMYGSIRGIAGN AVQSVRALELDFIEGNDEEEETKELE
Specific function: Unknown
COG id: COG4487
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49804; Mature: 49673
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQSSIQCPNCGTPIDVNDVLKHQLEDSIRKEFQQKATIQNRELELKNEQLDKAKAEFE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH AKKKQENELFAERLEREKKTAEKEISEKLKAKLEEENKDRLLLMEKELSEKSEKIRELNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH MEGEIAKLQREKLEMKDAIQAEAEKQLNTQLALEREKIRKQEDDKNELKFKELQKQLEEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KKLTEEMKRKQEQGSMQLQGEVMELAIEEWLANNFPLDSIDEVKKGANGADCLQIVNTRE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCC HQNCGSIYYESKRTKAFQPSWIEKFKNDIRTKRANIGVLVTEVMPNGMERMGMRDGIWIC CCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHCCCCCCEEEE TYEEFKGLSAVLRQSLIQINQAVQAQENKGDKMSMLYDFLTSNEFRLQIEGIVEGFTQMQ EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHH SDLDSEKRAMQRIWKQREKQIEKVVHNTLGMYGSIRGIAGNAVQSVRALELDFIEGNDEE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCCCCH EETKELE HHHHCCC >Mature Secondary Structure AEQSSIQCPNCGTPIDVNDVLKHQLEDSIRKEFQQKATIQNRELELKNEQLDKAKAEFE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH AKKKQENELFAERLEREKKTAEKEISEKLKAKLEEENKDRLLLMEKELSEKSEKIRELNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH MEGEIAKLQREKLEMKDAIQAEAEKQLNTQLALEREKIRKQEDDKNELKFKELQKQLEEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KKLTEEMKRKQEQGSMQLQGEVMELAIEEWLANNFPLDSIDEVKKGANGADCLQIVNTRE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCC HQNCGSIYYESKRTKAFQPSWIEKFKNDIRTKRANIGVLVTEVMPNGMERMGMRDGIWIC CCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHCCCCCCEEEE TYEEFKGLSAVLRQSLIQINQAVQAQENKGDKMSMLYDFLTSNEFRLQIEGIVEGFTQMQ EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHH SDLDSEKRAMQRIWKQREKQIEKVVHNTLGMYGSIRGIAGNAVQSVRALELDFIEGNDEE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCCCCH EETKELE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA