Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302156

Identifier: 146302156

GI number: 146302156

Start: 5334107

End: 5334679

Strand: Direct

Name: 146302156

Synonym: Fjoh_4424

Alternate gene names: NA

Gene position: 5334107-5334679 (Clockwise)

Preceding gene: 146302155

Following gene: 146302157

Centisome position: 87.49

GC content: 38.74

Gene sequence:

>573_bases
ATGGAAAGTTTTAAATTATTTTTAAAGAGCATTGTCCCTGTCAGCGATCAGGAATTTGAAAATTACAGCCAGTATTTCAA
AATAAGGACATTAGCCAGAAACAGTTATTTTGCAGAGATCGGCAAAACCTCACATGAAGCCGCTTTTATAAAAAAAGGGC
TGCTCAGGACATATTACATAAATGAAAAATCCGAAGAAGTGACTTCTTGTTTCTGTGCAGAAAATAATTTGACAGCATCC
TATAAGAGCTTTATTTCGCAGCAGCCTTCGGAACTTTCCATTCAGGCTGTAGAAGATACCGAACTTATAACAATCAGTTA
CAATGACCTGCAGATTCTCTATCAAAAAAGTGCTCTCTGGCAGAATATCGGAAGGACAATTGCTGAGCGGCAGTATATGG
TGATGGAACAGTATGCCAGTGTTTTGAGCAATGAAAGCGCAAAGGAAAAATACATGCGTATGCTTAAGGAACAGCCTGCA
GTTGTAAACAAGGCTTCAGTAACTGATATTGCAAGCTATCTAGGAATAACACGCAGGACGCTGAGCAGGATCAGAAAAGA
AATTACCAAGTAA

Upstream 100 bases:

>100_bases
TATTGAAAAAACAGCCCGTGCTATTGAGGAAAGTCCTCTTCCAGACATTTACGCGTTTATGCTTAGAAAAGCATATTAAA
ATATTGAAATAAAACCTACT

Downstream 100 bases:

>100_bases
ATTCGAGGACATTTGTCCTTTTTGCTAATTATACTTTCCAATAGTTTTGCTTTTATAATCAATTAAAAATAAAATGGAAA
CAGCAATTATCATTTCATCC

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: Catabolite Gene Activator Protein; Regulatory Protein; Crp/Fnr Family Transcriptional Regulator

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYINEKSEEVTSCFCAENNLTAS
YKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALWQNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPA
VVNKASVTDIASYLGITRRTLSRIRKEITK

Sequences:

>Translated_190_residues
MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYINEKSEEVTSCFCAENNLTAS
YKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALWQNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPA
VVNKASVTDIASYLGITRRTLSRIRKEITK
>Mature_190_residues
MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYINEKSEEVTSCFCAENNLTAS
YKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALWQNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPA
VVNKASVTDIASYLGITRRTLSRIRKEITK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22001; Mature: 22001

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYI
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE
NEKSEEVTSCFCAENNLTASYKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALW
CCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHH
QNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPAVVNKASVTDIASYLGITRRT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHH
LSRIRKEITK
HHHHHHHHCC
>Mature Secondary Structure
MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYI
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE
NEKSEEVTSCFCAENNLTASYKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALW
CCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHH
QNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPAVVNKASVTDIASYLGITRRT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHH
LSRIRKEITK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA