| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302156
Identifier: 146302156
GI number: 146302156
Start: 5334107
End: 5334679
Strand: Direct
Name: 146302156
Synonym: Fjoh_4424
Alternate gene names: NA
Gene position: 5334107-5334679 (Clockwise)
Preceding gene: 146302155
Following gene: 146302157
Centisome position: 87.49
GC content: 38.74
Gene sequence:
>573_bases ATGGAAAGTTTTAAATTATTTTTAAAGAGCATTGTCCCTGTCAGCGATCAGGAATTTGAAAATTACAGCCAGTATTTCAA AATAAGGACATTAGCCAGAAACAGTTATTTTGCAGAGATCGGCAAAACCTCACATGAAGCCGCTTTTATAAAAAAAGGGC TGCTCAGGACATATTACATAAATGAAAAATCCGAAGAAGTGACTTCTTGTTTCTGTGCAGAAAATAATTTGACAGCATCC TATAAGAGCTTTATTTCGCAGCAGCCTTCGGAACTTTCCATTCAGGCTGTAGAAGATACCGAACTTATAACAATCAGTTA CAATGACCTGCAGATTCTCTATCAAAAAAGTGCTCTCTGGCAGAATATCGGAAGGACAATTGCTGAGCGGCAGTATATGG TGATGGAACAGTATGCCAGTGTTTTGAGCAATGAAAGCGCAAAGGAAAAATACATGCGTATGCTTAAGGAACAGCCTGCA GTTGTAAACAAGGCTTCAGTAACTGATATTGCAAGCTATCTAGGAATAACACGCAGGACGCTGAGCAGGATCAGAAAAGA AATTACCAAGTAA
Upstream 100 bases:
>100_bases TATTGAAAAAACAGCCCGTGCTATTGAGGAAAGTCCTCTTCCAGACATTTACGCGTTTATGCTTAGAAAAGCATATTAAA ATATTGAAATAAAACCTACT
Downstream 100 bases:
>100_bases ATTCGAGGACATTTGTCCTTTTTGCTAATTATACTTTCCAATAGTTTTGCTTTTATAATCAATTAAAAATAAAATGGAAA CAGCAATTATCATTTCATCC
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: Catabolite Gene Activator Protein; Regulatory Protein; Crp/Fnr Family Transcriptional Regulator
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYINEKSEEVTSCFCAENNLTAS YKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALWQNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPA VVNKASVTDIASYLGITRRTLSRIRKEITK
Sequences:
>Translated_190_residues MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYINEKSEEVTSCFCAENNLTAS YKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALWQNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPA VVNKASVTDIASYLGITRRTLSRIRKEITK >Mature_190_residues MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYINEKSEEVTSCFCAENNLTAS YKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALWQNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPA VVNKASVTDIASYLGITRRTLSRIRKEITK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22001; Mature: 22001
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYI CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE NEKSEEVTSCFCAENNLTASYKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALW CCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHH QNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPAVVNKASVTDIASYLGITRRT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHH LSRIRKEITK HHHHHHHHCC >Mature Secondary Structure MESFKLFLKSIVPVSDQEFENYSQYFKIRTLARNSYFAEIGKTSHEAAFIKKGLLRTYYI CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE NEKSEEVTSCFCAENNLTASYKSFISQQPSELSIQAVEDTELITISYNDLQILYQKSALW CCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHH QNIGRTIAERQYMVMEQYASVLSNESAKEKYMRMLKEQPAVVNKASVTDIASYLGITRRT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHH LSRIRKEITK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA