| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146302155
Identifier: 146302155
GI number: 146302155
Start: 5333351
End: 5334085
Strand: Direct
Name: 146302155
Synonym: Fjoh_4423
Alternate gene names: NA
Gene position: 5333351-5334085 (Clockwise)
Preceding gene: 146302154
Following gene: 146302156
Centisome position: 87.48
GC content: 36.87
Gene sequence:
>735_bases ATGAGAATTGCAATAATATCGGATATACATGCGAACTTCCCCGCATTGGAGCAGACCTTAAAAAGTATTGAAGAGCAGAA TATTGATGCTGTTTACTGCTTAGGAGATTTAGTAGGCTACAATTTATGCCCCAATGCCGTGATCAATGAGATCCGTAAAA AGCATATCCCTACCCTTGCAGGAAATCACGATGTCAAGGCTGTCGAGATACACAATGACGGTTCAAATGACATTGAAAGC TATGCATATCAGATTGTGGGCAAAGAGCAGATAAAATATCTTTCTGCTCTTCCTGCCCATATTAAACTTGAATATCAGAC GGCTAACAAACTTATAAAAATTTTGATGGTCCATGGGAGTCCTTACAGCAACAAGGAATATTTGCTTGAGGATAAAAACG AAAAAGATTTCACTAACATCTTTCTTGATTCCAATACAGACATTCTTATCTGCGGACATTCTCATTTACCTTATCATCGC ATATTGGAAAATCCTAATAAAAAAGGCAGTTATTTTCATGCCATTAATGCAGGGTCGGTTGGAAAACCAAAAGATAGAAA TCCAGACTGCTGTTATGCAGTAATCACCATTGAAAAAAGCAGTAATCTTTCCAAAAAAGACGGCATTAAAGTAGAATTCA TAAGAGTACCTTATGATATTGAAAAAACAGCCCGTGCTATTGAGGAAAGTCCTCTTCCAGACATTTACGCGTTTATGCTT AGAAAAGCATATTAA
Upstream 100 bases:
>100_bases GGTAGAAGTACCTGCTCTTATAGCATTAGTAAACCTTGCATTCTGGTTCAGAAAGAAGTATTTCACAAAACAGGTATCTG CAGAAACTGCTTAAAAAAAT
Downstream 100 bases:
>100_bases AATATTGAAATAAAACCTACTATGGAAAGTTTTAAATTATTTTTAAAGAGCATTGTCCCTGTCAGCGATCAGGAATTTGA AAATTACAGCCAGTATTTCA
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MRIAIISDIHANFPALEQTLKSIEEQNIDAVYCLGDLVGYNLCPNAVINEIRKKHIPTLAGNHDVKAVEIHNDGSNDIES YAYQIVGKEQIKYLSALPAHIKLEYQTANKLIKILMVHGSPYSNKEYLLEDKNEKDFTNIFLDSNTDILICGHSHLPYHR ILENPNKKGSYFHAINAGSVGKPKDRNPDCCYAVITIEKSSNLSKKDGIKVEFIRVPYDIEKTARAIEESPLPDIYAFML RKAY
Sequences:
>Translated_244_residues MRIAIISDIHANFPALEQTLKSIEEQNIDAVYCLGDLVGYNLCPNAVINEIRKKHIPTLAGNHDVKAVEIHNDGSNDIES YAYQIVGKEQIKYLSALPAHIKLEYQTANKLIKILMVHGSPYSNKEYLLEDKNEKDFTNIFLDSNTDILICGHSHLPYHR ILENPNKKGSYFHAINAGSVGKPKDRNPDCCYAVITIEKSSNLSKKDGIKVEFIRVPYDIEKTARAIEESPLPDIYAFML RKAY >Mature_244_residues MRIAIISDIHANFPALEQTLKSIEEQNIDAVYCLGDLVGYNLCPNAVINEIRKKHIPTLAGNHDVKAVEIHNDGSNDIES YAYQIVGKEQIKYLSALPAHIKLEYQTANKLIKILMVHGSPYSNKEYLLEDKNEKDFTNIFLDSNTDILICGHSHLPYHR ILENPNKKGSYFHAINAGSVGKPKDRNPDCCYAVITIEKSSNLSKKDGIKVEFIRVPYDIEKTARAIEESPLPDIYAFML RKAY
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011152 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 27604; Mature: 27604
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAIISDIHANFPALEQTLKSIEEQNIDAVYCLGDLVGYNLCPNAVINEIRKKHIPTLA CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHCCCCC GNHDVKAVEIHNDGSNDIESYAYQIVGKEQIKYLSALPAHIKLEYQTANKLIKILMVHGS CCCCEEEEEEECCCCCHHHHHHHHHHCHHHHHHHHCCCCEEEEEEHHHHHEEEEEEEECC PYSNKEYLLEDKNEKDFTNIFLDSNTDILICGHSHLPYHRILENPNKKGSYFHAINAGSV CCCCCCEEECCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHCCCCCCCCEEEEECCCCC GKPKDRNPDCCYAVITIEKSSNLSKKDGIKVEFIRVPYDIEKTARAIEESPLPDIYAFML CCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHH RKAY HHCC >Mature Secondary Structure MRIAIISDIHANFPALEQTLKSIEEQNIDAVYCLGDLVGYNLCPNAVINEIRKKHIPTLA CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHCCCCC GNHDVKAVEIHNDGSNDIESYAYQIVGKEQIKYLSALPAHIKLEYQTANKLIKILMVHGS CCCCEEEEEEECCCCCHHHHHHHHHHCHHHHHHHHCCCCEEEEEEHHHHHEEEEEEEECC PYSNKEYLLEDKNEKDFTNIFLDSNTDILICGHSHLPYHRILENPNKKGSYFHAINAGSV CCCCCCEEECCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHCCCCCCCCEEEEECCCCC GKPKDRNPDCCYAVITIEKSSNLSKKDGIKVEFIRVPYDIEKTARAIEESPLPDIYAFML CCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHH RKAY HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]