| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302157
Identifier: 146302157
GI number: 146302157
Start: 5334753
End: 5335316
Strand: Direct
Name: 146302157
Synonym: Fjoh_4425
Alternate gene names: NA
Gene position: 5334753-5335316 (Clockwise)
Preceding gene: 146302156
Following gene: 146302158
Centisome position: 87.5
GC content: 32.8
Gene sequence:
>564_bases ATGGAAACAGCAATTATCATTTCATCCTTCTTTCTTGTTCTATTTGCAGTCTTGGCCTTGTATGATGGCTTTTATCTGCA TATTTACAAATACCAGCTTCACAATCGGGAAGAAAGTAAAACTGAGCACGTTACTCATACTTTGAGAGCTATTTTCTTTC CGGCAATCCTTTATTTTTTGTTCTTGAAACAAGATAATCATACTAGTTTTGTAATAGGCTTAACCATTGTCCTTTTAGAT ATACTAGTGCTCGGGTATGACGCTTTTATAGAAAAAGACAGCAGGCAGTTTATGGGCGAGCTTCCACGCTGGGAATATAT TGTTCATTTATTCGTAAATGGGTTTCATTTTGCGTCAATTGCGGTTTATCTCTCCATCAGATTTACTTTTCAAAATGGAG AAATAATGATTTCTAATATAAATCAATCTCCAAGCTTTTTTAATTTGTTAATTATAAATCTACTGCCGGGAGCTATCCTA ATGGCAATTCTTCATATTTTATTATGTATTCCAAAAACTGCCTATGTATGGAATAATTTCAGAAATAAAATCAATTGTTG TTAA
Upstream 100 bases:
>100_bases AGGATCAGAAAAGAAATTACCAAGTAAATTCGAGGACATTTGTCCTTTTTGCTAATTATACTTTCCAATAGTTTTGCTTT TATAATCAATTAAAAATAAA
Downstream 100 bases:
>100_bases TCCAGCTTTCTAAACAAACAGAACATTTAATTTATGAATTTGGAGATAAATACTATTCATAATCAGTTTTATATCATTTT GGGCAATTATATTAAGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues METAIIISSFFLVLFAVLALYDGFYLHIYKYQLHNREESKTEHVTHTLRAIFFPAILYFLFLKQDNHTSFVIGLTIVLLD ILVLGYDAFIEKDSRQFMGELPRWEYIVHLFVNGFHFASIAVYLSIRFTFQNGEIMISNINQSPSFFNLLIINLLPGAIL MAILHILLCIPKTAYVWNNFRNKINCC
Sequences:
>Translated_187_residues METAIIISSFFLVLFAVLALYDGFYLHIYKYQLHNREESKTEHVTHTLRAIFFPAILYFLFLKQDNHTSFVIGLTIVLLD ILVLGYDAFIEKDSRQFMGELPRWEYIVHLFVNGFHFASIAVYLSIRFTFQNGEIMISNINQSPSFFNLLIINLLPGAIL MAILHILLCIPKTAYVWNNFRNKINCC >Mature_187_residues METAIIISSFFLVLFAVLALYDGFYLHIYKYQLHNREESKTEHVTHTLRAIFFPAILYFLFLKQDNHTSFVIGLTIVLLD ILVLGYDAFIEKDSRQFMGELPRWEYIVHLFVNGFHFASIAVYLSIRFTFQNGEIMISNINQSPSFFNLLIINLLPGAIL MAILHILLCIPKTAYVWNNFRNKINCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21794; Mature: 21794
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METAIIISSFFLVLFAVLALYDGFYLHIYKYQLHNREESKTEHVTHTLRAIFFPAILYFL CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH FLKQDNHTSFVIGLTIVLLDILVLGYDAFIEKDSRQFMGELPRWEYIVHLFVNGFHFASI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHE AVYLSIRFTFQNGEIMISNINQSPSFFNLLIINLLPGAILMAILHILLCIPKTAYVWNNF EEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH RNKINCC HHCCCCC >Mature Secondary Structure METAIIISSFFLVLFAVLALYDGFYLHIYKYQLHNREESKTEHVTHTLRAIFFPAILYFL CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH FLKQDNHTSFVIGLTIVLLDILVLGYDAFIEKDSRQFMGELPRWEYIVHLFVNGFHFASI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHE AVYLSIRFTFQNGEIMISNINQSPSFFNLLIINLLPGAILMAILHILLCIPKTAYVWNNF EEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH RNKINCC HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA