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The map label for this gene is rhaM

Identifier: 146301966

GI number: 146301966

Start: 5093339

End: 5093662

Strand: Reverse

Name: rhaM

Synonym: Fjoh_4230

Alternate gene names: 146301966

Gene position: 5093662-5093339 (Counterclockwise)

Preceding gene: 146301967

Following gene: 146301965

Centisome position: 83.55

GC content: 35.8

Gene sequence:

>324_bases
ATGGAAAACGCAATTAGAAATGCTTTTACTATGAAAGTAAAATCAGGTTTTGAAACCGAATATAAAATCAGACACGATCA
AATCTGGCCTGAACTCACGGCACTGCTTTCAGAAAGCGGGATTTGTGATTATTCTATTTTTCTGGATGAAGAAACCGGAA
TTCTTTTTGGTGTTCAAAAATTAAGCTCAGGTTTTGACCGTTCACAGCTTTCCAGTCATCCGCTTATGCGAAAATGGTGG
AATCACATGTCAGATATAATGGAAACAAATCCAGATAATTCACCCAAAACAAACTCCCTAAAAGAGGTTTTTCATTTAGA
TTAA

Upstream 100 bases:

>100_bases
TTTCAAAACGGAAAAGCGACGTATATGTTCACCGCTTCACAAGGCGGAAAATACGAAACTGCTTCGGCCTTTATTTTTAA
AATAATTTAAAAGTGAAAAA

Downstream 100 bases:

>100_bases
ATGATTAAATTGTTTTTCAATAAAAAAGTAATAAATAATGAAAGGTACAATCAAACTTTACGTCCCAATTGCATTTTCAA
TGTTGGTTTTTGCAAACGTT

Product: L-rhamnose 1-epimerase

Products: NA

Alternate protein names: Rhamnose 1-epimerase; Type-3 mutarotase

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MENAIRNAFTMKVKSGFETEYKIRHDQIWPELTALLSESGICDYSIFLDEETGILFGVQKLSSGFDRSQLSSHPLMRKWW
NHMSDIMETNPDNSPKTNSLKEVFHLD

Sequences:

>Translated_107_residues
MENAIRNAFTMKVKSGFETEYKIRHDQIWPELTALLSESGICDYSIFLDEETGILFGVQKLSSGFDRSQLSSHPLMRKWW
NHMSDIMETNPDNSPKTNSLKEVFHLD
>Mature_107_residues
MENAIRNAFTMKVKSGFETEYKIRHDQIWPELTALLSESGICDYSIFLDEETGILFGVQKLSSGFDRSQLSSHPLMRKWW
NHMSDIMETNPDNSPKTNSLKEVFHLD

Specific function: Involved in the anomeric conversion of L-rhamnose

COG id: COG3254

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose mutarotase family

Homologues:

Organism=Escherichia coli, GI1790335, Length=102, Percent_Identity=41.1764705882353, Blast_Score=96, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHAM_FLAJ1 (A5FC30)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001196557.1
- ProteinModelPortal:   A5FC30
- SMR:   A5FC30
- STRING:   A5FC30
- GeneID:   5092272
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_4230
- eggNOG:   COG3254
- HOGENOM:   HBG649684
- OMA:   KDHGAHH
- BioCyc:   FJOH376686:FJOH_4230-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01663
- InterPro:   IPR013448
- InterPro:   IPR008000
- TIGRFAMs:   TIGR02625

Pfam domain/function: PF05336 DUF718

EC number: NA

Molecular weight: Translated: 12412; Mature: 12412

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: ACT_SITE 25-25 BINDING 21-21 BINDING 44-44

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENAIRNAFTMKVKSGFETEYKIRHDQIWPELTALLSESGICDYSIFLDEETGILFGVQK
CCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHEEHHH
LSSGFDRSQLSSHPLMRKWWNHMSDIMETNPDNSPKTNSLKEVFHLD
HHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MENAIRNAFTMKVKSGFETEYKIRHDQIWPELTALLSESGICDYSIFLDEETGILFGVQK
CCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHEEHHH
LSSGFDRSQLSSHPLMRKWWNHMSDIMETNPDNSPKTNSLKEVFHLD
HHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA