| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301967
Identifier: 146301967
GI number: 146301967
Start: 5093673
End: 5094779
Strand: Reverse
Name: 146301967
Synonym: Fjoh_4231
Alternate gene names: NA
Gene position: 5094779-5093673 (Counterclockwise)
Preceding gene: 146301968
Following gene: 146301966
Centisome position: 83.56
GC content: 39.3
Gene sequence:
>1107_bases ATGTGTTTAAAACAAAAAACCAAAATCAAAGATCAAATGAATAGAAGACAATTTATAATAGGAAATTCTTTGGCTGTTAT GGGATTATGTCTTCCATTTTCGGCGAAAGCCCTTACTATTTTAGACGATCCCAGACTTTCAGATTTTGAGAAAAAACTCC GTCCAGTTGGGAGAGCTTTAGAATTTGAAGAGTATTATGTTTGGTGCAACAGCCCGATTGAAGGTCCGGACGGAAAAATT CACGTCTTTTTTTCGAGATGGAAAAAATCAAAAAGCATGAGCGGCTGGATAAACGGTTCAGAAATTGCCCATGCTGTTGC CGACAAACCAGAAGGCCCTTATGAATATGTCAGCACTATTTTAGCGCCAAGAGGCGAAGGTTTTTGGGATGCCACAACCT GTCATAATCCGAGTATTCATTTTGTAGACGGAAAATATGCACTTTTTTTCATGGGAAATTCCAATGGAAAAATGGATACC AAACGCATCGGCTTAGCTGTTTCTGATTCACTTTACGGCCCGTGGGAACGACCAGATCAACCATTGCTGCTTCCGGGAGA AACTGGTTCCTGGGACGATCTGCTGACGACAAATCCTTCTTTTTTAAAACATCCAAACGGAGAATACTGGCTTTATTATA AATCATTGGATACAGAAAATTATGTGCATCCAAAATTTCCCGTAAAAGGAAACCGGAAATACGGACTGGCAGTTTCTAAA TCACTCAAAGGACCTTATATAAAATCGCCACAAAATCCTGTAATTGATTTTTCAAAACTCGGTGATAATAAACAATGCGA AGATGCTTTTGTATGGTACGAAAACAAGAAATTTAAAATGCTGGCAAGAGATATGGGAGTTTTTGGAATGGATTACGGAC TTTATATGGATTCTGATGACGGAATTCACTGGAATGACCCGCAGATTTCCTATCAGCCCTTAGATAAATATATCAAACAG CCTGATGCACCAAAACATTTAAACCGCTACGGACGTGCCGAACGCCCGCAGTTACTGTTTCAAAACGGAAAAGCGACGTA TATGTTCACCGCTTCACAAGGCGGAAAATACGAAACTGCTTCGGCCTTTATTTTTAAAATAATTTAA
Upstream 100 bases:
>100_bases TTTTTAAACACATAGAAACATAGTTTGCAGAAGCTTCGGAGCTATGTGTAAAAACTAGTTTTTAAAGAGCTTTTTTAGAG AATTAAAAATCTATGTTTCT
Downstream 100 bases:
>100_bases AAGTGAAAAAATGGAAAACGCAATTAGAAATGCTTTTACTATGAAAGTAAAATCAGGTTTTGAAACCGAATATAAAATCA GACACGATCAAATCTGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MCLKQKTKIKDQMNRRQFIIGNSLAVMGLCLPFSAKALTILDDPRLSDFEKKLRPVGRALEFEEYYVWCNSPIEGPDGKI HVFFSRWKKSKSMSGWINGSEIAHAVADKPEGPYEYVSTILAPRGEGFWDATTCHNPSIHFVDGKYALFFMGNSNGKMDT KRIGLAVSDSLYGPWERPDQPLLLPGETGSWDDLLTTNPSFLKHPNGEYWLYYKSLDTENYVHPKFPVKGNRKYGLAVSK SLKGPYIKSPQNPVIDFSKLGDNKQCEDAFVWYENKKFKMLARDMGVFGMDYGLYMDSDDGIHWNDPQISYQPLDKYIKQ PDAPKHLNRYGRAERPQLLFQNGKATYMFTASQGGKYETASAFIFKII
Sequences:
>Translated_368_residues MCLKQKTKIKDQMNRRQFIIGNSLAVMGLCLPFSAKALTILDDPRLSDFEKKLRPVGRALEFEEYYVWCNSPIEGPDGKI HVFFSRWKKSKSMSGWINGSEIAHAVADKPEGPYEYVSTILAPRGEGFWDATTCHNPSIHFVDGKYALFFMGNSNGKMDT KRIGLAVSDSLYGPWERPDQPLLLPGETGSWDDLLTTNPSFLKHPNGEYWLYYKSLDTENYVHPKFPVKGNRKYGLAVSK SLKGPYIKSPQNPVIDFSKLGDNKQCEDAFVWYENKKFKMLARDMGVFGMDYGLYMDSDDGIHWNDPQISYQPLDKYIKQ PDAPKHLNRYGRAERPQLLFQNGKATYMFTASQGGKYETASAFIFKII >Mature_368_residues MCLKQKTKIKDQMNRRQFIIGNSLAVMGLCLPFSAKALTILDDPRLSDFEKKLRPVGRALEFEEYYVWCNSPIEGPDGKI HVFFSRWKKSKSMSGWINGSEIAHAVADKPEGPYEYVSTILAPRGEGFWDATTCHNPSIHFVDGKYALFFMGNSNGKMDT KRIGLAVSDSLYGPWERPDQPLLLPGETGSWDDLLTTNPSFLKHPNGEYWLYYKSLDTENYVHPKFPVKGNRKYGLAVSK SLKGPYIKSPQNPVIDFSKLGDNKQCEDAFVWYENKKFKMLARDMGVFGMDYGLYMDSDDGIHWNDPQISYQPLDKYIKQ PDAPKHLNRYGRAERPQLLFQNGKATYMFTASQGGKYETASAFIFKII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42036; Mature: 42036
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLKQKTKIKDQMNRRQFIIGNSLAVMGLCLPFSAKALTILDDPRLSDFEKKLRPVGRAL CCCCCHHHHHHHHCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHE EFEEYYVWCNSPIEGPDGKIHVFFSRWKKSKSMSGWINGSEIAHAVADKPEGPYEYVSTI EEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH LAPRGEGFWDATTCHNPSIHFVDGKYALFFMGNSNGKMDTKRIGLAVSDSLYGPWERPDQ HCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCHHEEEEEEECCCCCCCCCCCC PLLLPGETGSWDDLLTTNPSFLKHPNGEYWLYYKSLDTENYVHPKFPVKGNRKYGLAVSK CEEEECCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECEEEEC SLKGPYIKSPQNPVIDFSKLGDNKQCEDAFVWYENKKFKMLARDMGVFGMDYGLYMDSDD CCCCCCCCCCCCCCEEHHHCCCCCCCCCEEEEEECCCCEEHHHHCCCEEECCEEEEECCC GIHWNDPQISYQPLDKYIKQPDAPKHLNRYGRAERPQLLFQNGKATYMFTASQGGKYETA CEECCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCEECC SAFIFKII EEEEEEEC >Mature Secondary Structure MCLKQKTKIKDQMNRRQFIIGNSLAVMGLCLPFSAKALTILDDPRLSDFEKKLRPVGRAL CCCCCHHHHHHHHCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHE EFEEYYVWCNSPIEGPDGKIHVFFSRWKKSKSMSGWINGSEIAHAVADKPEGPYEYVSTI EEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH LAPRGEGFWDATTCHNPSIHFVDGKYALFFMGNSNGKMDTKRIGLAVSDSLYGPWERPDQ HCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCHHEEEEEEECCCCCCCCCCCC PLLLPGETGSWDDLLTTNPSFLKHPNGEYWLYYKSLDTENYVHPKFPVKGNRKYGLAVSK CEEEECCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECEEEEC SLKGPYIKSPQNPVIDFSKLGDNKQCEDAFVWYENKKFKMLARDMGVFGMDYGLYMDSDD CCCCCCCCCCCCCCEEHHHCCCCCCCCCEEEEEECCCCEEHHHHCCCEEECCEEEEECCC GIHWNDPQISYQPLDKYIKQPDAPKHLNRYGRAERPQLLFQNGKATYMFTASQGGKYETA CEECCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCEECC SAFIFKII EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA