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The map label for this gene is 146301965

Identifier: 146301965

GI number: 146301965

Start: 5092012

End: 5093301

Strand: Reverse

Name: 146301965

Synonym: Fjoh_4229

Alternate gene names: NA

Gene position: 5093301-5092012 (Counterclockwise)

Preceding gene: 146301966

Following gene: 146301964

Centisome position: 83.54

GC content: 35.97

Gene sequence:

>1290_bases
ATGAAAGGTACAATCAAACTTTACGTCCCAATTGCATTTTCAATGTTGGTTTTTGCAAACGTTAATGCGCAGAAAAAAAC
GGGAAATACAATTGTCTTAAAAAACACTTCCAGCTTAGAGCTGTCTCAAAAAGCAGTTGCTATAAAAAGAAAACAGCTTT
CTTTACAAAATGATTCAGGAAAATATCCAATTTTAATTTATAAAAACGATACAATTCCGGCTCAGGTAAATGATTTAGAC
GGCGATGGAAAATGGGACGAATTGTTTCTGGTAACTGATTTTGCTCCAAAAGAAGAAAAGAAAGCCGTTTTGAGCTGGTC
AGATACTGATCCGAAATTCACGATAAGAACAAGTGCCAGATTTGGGAAAAGAGAAGGGAAAAATCTGCCGGTTCATCCAG
ATACTCAAGAAGTTTTATTAGCAAATCAGGTTCTTAAAAAACTTGGTTACCAAAAATACCAAACCGACGGACCAACTTGG
GAAAATGATAAAGTAGGTTTCAGACATTATCTGGACGGAAGAAACTGTAAAGACGTTTTTGGTAAAAAAACACCCGGAAT
TACACCAGAAGATGTAGGGATAAACAGCAAAGGAGAAGTTGAAGACAATTATCACGTAATGCTCGACTGGGGCAGGGACA
TTTTTCCGGTAGGAAGCTCATCAGGATTAGGAGGTTTTGCTTTATTAACGAGCGACAATAAATTACACCGGTTAGGAATT
CTTGCCAACGATACTGTAAATAATATTGAGAAAACGACTTTTAAAATTGTAAGCGAAGGCCCTGAAAATTCAGTTTTAAA
TTATAAATACGAAAATTGGGAAGCCTCAGGAAATAAATACCAGGCTGAAGAAACCGCTTCAATCTGGCCGGGAATGTACG
GTTATAAAAATACCGTTTCTGTAAACGGTTTAAAAGACAATGATACCGTTTTAATTACCCTTTCTAACATTAACAACCAA
AATCCGCTGCAGGTAATCGACTCAGGAGATTTTGTATGTCTTATTCAGCATGATAAATTAACCTACGAACGCCAATGGAT
TTTAGGAACAGCGATATTATTTCCAAAAGATCTTTATAAAGGATATATAGAAGCACCGAAAAAAGGACAGCTGACCGATT
CGTATTTAATAAAAACTTCTGCTAAAAATAACCAGCAGATAAGTTATTACCCAATAGCCGGCTGGGAATTAAGCGCAGAC
AAAGGTTTTAAAGATTCGGCTTATTTTACCAGTTATGTAACAACTCTTGCCAAACAATTATCTGCAAAAGTAAAAGTTGA
GGTAAAATAA

Upstream 100 bases:

>100_bases
GAAACAAATCCAGATAATTCACCCAAAACAAACTCCCTAAAAGAGGTTTTTCATTTAGATTAAATGATTAAATTGTTTTT
CAATAAAAAAGTAATAAATA

Downstream 100 bases:

>100_bases
TGAGATAACACCAATGTAAAACCTTGTCAAAGTTTCAAACTTAGGCAAGGTTTAATAACCACAAAACTAACAACTAACCC
AATGAAAACCATCTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA-Directed RNA Polymerase Subunit Alpha; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MKGTIKLYVPIAFSMLVFANVNAQKKTGNTIVLKNTSSLELSQKAVAIKRKQLSLQNDSGKYPILIYKNDTIPAQVNDLD
GDGKWDELFLVTDFAPKEEKKAVLSWSDTDPKFTIRTSARFGKREGKNLPVHPDTQEVLLANQVLKKLGYQKYQTDGPTW
ENDKVGFRHYLDGRNCKDVFGKKTPGITPEDVGINSKGEVEDNYHVMLDWGRDIFPVGSSSGLGGFALLTSDNKLHRLGI
LANDTVNNIEKTTFKIVSEGPENSVLNYKYENWEASGNKYQAEETASIWPGMYGYKNTVSVNGLKDNDTVLITLSNINNQ
NPLQVIDSGDFVCLIQHDKLTYERQWILGTAILFPKDLYKGYIEAPKKGQLTDSYLIKTSAKNNQQISYYPIAGWELSAD
KGFKDSAYFTSYVTTLAKQLSAKVKVEVK

Sequences:

>Translated_429_residues
MKGTIKLYVPIAFSMLVFANVNAQKKTGNTIVLKNTSSLELSQKAVAIKRKQLSLQNDSGKYPILIYKNDTIPAQVNDLD
GDGKWDELFLVTDFAPKEEKKAVLSWSDTDPKFTIRTSARFGKREGKNLPVHPDTQEVLLANQVLKKLGYQKYQTDGPTW
ENDKVGFRHYLDGRNCKDVFGKKTPGITPEDVGINSKGEVEDNYHVMLDWGRDIFPVGSSSGLGGFALLTSDNKLHRLGI
LANDTVNNIEKTTFKIVSEGPENSVLNYKYENWEASGNKYQAEETASIWPGMYGYKNTVSVNGLKDNDTVLITLSNINNQ
NPLQVIDSGDFVCLIQHDKLTYERQWILGTAILFPKDLYKGYIEAPKKGQLTDSYLIKTSAKNNQQISYYPIAGWELSAD
KGFKDSAYFTSYVTTLAKQLSAKVKVEVK
>Mature_429_residues
MKGTIKLYVPIAFSMLVFANVNAQKKTGNTIVLKNTSSLELSQKAVAIKRKQLSLQNDSGKYPILIYKNDTIPAQVNDLD
GDGKWDELFLVTDFAPKEEKKAVLSWSDTDPKFTIRTSARFGKREGKNLPVHPDTQEVLLANQVLKKLGYQKYQTDGPTW
ENDKVGFRHYLDGRNCKDVFGKKTPGITPEDVGINSKGEVEDNYHVMLDWGRDIFPVGSSSGLGGFALLTSDNKLHRLGI
LANDTVNNIEKTTFKIVSEGPENSVLNYKYENWEASGNKYQAEETASIWPGMYGYKNTVSVNGLKDNDTVLITLSNINNQ
NPLQVIDSGDFVCLIQHDKLTYERQWILGTAILFPKDLYKGYIEAPKKGQLTDSYLIKTSAKNNQQISYYPIAGWELSAD
KGFKDSAYFTSYVTTLAKQLSAKVKVEVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48060; Mature: 48060

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTIKLYVPIAFSMLVFANVNAQKKTGNTIVLKNTSSLELSQKAVAIKRKQLSLQNDSG
CCCEEEEEEHHHEEEEHEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEECCCCC
KYPILIYKNDTIPAQVNDLDGDGKWDELFLVTDFAPKEEKKAVLSWSDTDPKFTIRTSAR
CEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEECCC
FGKREGKNLPVHPDTQEVLLANQVLKKLGYQKYQTDGPTWENDKVGFRHYLDGRNCKDVF
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHEECCCCCHHHHH
GKKTPGITPEDVGINSKGEVEDNYHVMLDWGRDIFPVGSSSGLGGFALLTSDNKLHRLGI
CCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEEEECCCCEEEEEE
LANDTVNNIEKTTFKIVSEGPENSVLNYKYENWEASGNKYQAEETASIWPGMYGYKNTVS
EECCCCCCHHHEEEEEEECCCCCCEEEEEECCEECCCCEEECCHHHHHCCCCCCCCCEEE
VNGLKDNDTVLITLSNINNQNPLQVIDSGDFVCLIQHDKLTYERQWILGTAILFPKDLYK
ECCCCCCCEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCHHHHH
GYIEAPKKGQLTDSYLIKTSAKNNQQISYYPIAGWELSADKGFKDSAYFTSYVTTLAKQL
HHHCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHC
SAKVKVEVK
CCEEEEEEC
>Mature Secondary Structure
MKGTIKLYVPIAFSMLVFANVNAQKKTGNTIVLKNTSSLELSQKAVAIKRKQLSLQNDSG
CCCEEEEEEHHHEEEEHEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEECCCCC
KYPILIYKNDTIPAQVNDLDGDGKWDELFLVTDFAPKEEKKAVLSWSDTDPKFTIRTSAR
CEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEECCC
FGKREGKNLPVHPDTQEVLLANQVLKKLGYQKYQTDGPTWENDKVGFRHYLDGRNCKDVF
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHEECCCCCHHHHH
GKKTPGITPEDVGINSKGEVEDNYHVMLDWGRDIFPVGSSSGLGGFALLTSDNKLHRLGI
CCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEEEECCCCEEEEEE
LANDTVNNIEKTTFKIVSEGPENSVLNYKYENWEASGNKYQAEETASIWPGMYGYKNTVS
EECCCCCCHHHEEEEEEECCCCCCEEEEEECCEECCCCEEECCHHHHHCCCCCCCCCEEE
VNGLKDNDTVLITLSNINNQNPLQVIDSGDFVCLIQHDKLTYERQWILGTAILFPKDLYK
ECCCCCCCEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCHHHHH
GYIEAPKKGQLTDSYLIKTSAKNNQQISYYPIAGWELSADKGFKDSAYFTSYVTTLAKQL
HHHCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHC
SAKVKVEVK
CCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA