Click here to switch to the map view.

The map label for this gene is yfbM [H]

Identifier: 146301897

GI number: 146301897

Start: 4991099

End: 4991605

Strand: Reverse

Name: yfbM [H]

Synonym: Fjoh_4161

Alternate gene names: 146301897

Gene position: 4991605-4991099 (Counterclockwise)

Preceding gene: 146301898

Following gene: 146301896

Centisome position: 81.87

GC content: 26.43

Gene sequence:

>507_bases
ATGGGAATGATAGCTGAATATTTGATGGTTGATGAAGAAACATTAGATTATTTAATAGATTTAGATGATGAAGATTTGAC
AGATAGAATATTTGAAATTGAAGAAAGTAAAAAGTTTCTTTCTATAGATATAGATAAAATTTGGGATGCCTTACATTGCT
TTTTAACTAATGTTTCGGCAACAGAACCTATTGAAGACAATAAACTTAGTGAAGCTATTGTAGGGATTAATACTTTTAGT
GAAGATGAAGATGCTGATTTTATTAGTTTTACAGAGAATGATGAAATAAAAGGAATAATAGACGAAATGGAAAAAATTGA
TTTTGATATTTTAGTAGCCAATTTTGATCCGTTAATATTAAAAAAAAATAAAGTTTATCCAAAAGGAATTTGGGATGAAA
ATAAAGAACAATTAATTAAAGAGTTTAAAGCTGCTTTTGATGAGCTTCTTAAATTTTACAAGAAAGCCTTAGAAACACAG
CATCATGTTATTGTGAGTATACTTTAA

Upstream 100 bases:

>100_bases
GCAGCTGAATTGATTTTGGAAGGAATTTAAAAGTATATTTTTAATGTAGGATTATTATTTCAAAAATAATACTTTTGTAA
AAGTTTTAAAATTAAAAAAT

Downstream 100 bases:

>100_bases
AGTAGTAATATGACCAACCTTTACATTATTGGTGAACCAAAACCATTATCGAAACCAGAAATTGAAGAAATTGATAATCA
AATATCTTTTTCTCTACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGMIAEYLMVDEETLDYLIDLDDEDLTDRIFEIEESKKFLSIDIDKIWDALHCFLTNVSATEPIEDNKLSEAIVGINTFS
EDEDADFISFTENDEIKGIIDEMEKIDFDILVANFDPLILKKNKVYPKGIWDENKEQLIKEFKAAFDELLKFYKKALETQ
HHVIVSIL

Sequences:

>Translated_168_residues
MGMIAEYLMVDEETLDYLIDLDDEDLTDRIFEIEESKKFLSIDIDKIWDALHCFLTNVSATEPIEDNKLSEAIVGINTFS
EDEDADFISFTENDEIKGIIDEMEKIDFDILVANFDPLILKKNKVYPKGIWDENKEQLIKEFKAAFDELLKFYKKALETQ
HHVIVSIL
>Mature_167_residues
GMIAEYLMVDEETLDYLIDLDDEDLTDRIFEIEESKKFLSIDIDKIWDALHCFLTNVSATEPIEDNKLSEAIVGINTFSE
DEDADFISFTENDEIKGIIDEMEKIDFDILVANFDPLILKKNKVYPKGIWDENKEQLIKEFKAAFDELLKFYKKALETQH
HVIVSIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788608, Length=169, Percent_Identity=30.1775147928994, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015068 [H]

Pfam domain/function: PF08974 DUF1877 [H]

EC number: NA

Molecular weight: Translated: 19562; Mature: 19431

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMIAEYLMVDEETLDYLIDLDDEDLTDRIFEIEESKKFLSIDIDKIWDALHCFLTNVSA
CCHHHHHHHHCHHHHHHEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCC
TEPIEDNKLSEAIVGINTFSEDEDADFISFTENDEIKGIIDEMEKIDFDILVANFDPLIL
CCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCCEEE
KKNKVYPKGIWDENKEQLIKEFKAAFDELLKFYKKALETQHHVIVSIL
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure 
GMIAEYLMVDEETLDYLIDLDDEDLTDRIFEIEESKKFLSIDIDKIWDALHCFLTNVSA
CHHHHHHHHCHHHHHHEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCC
TEPIEDNKLSEAIVGINTFSEDEDADFISFTENDEIKGIIDEMEKIDFDILVANFDPLIL
CCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCCEEE
KKNKVYPKGIWDENKEQLIKEFKAAFDELLKFYKKALETQHHVIVSIL
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]