| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301896
Identifier: 146301896
GI number: 146301896
Start: 4990391
End: 4991089
Strand: Reverse
Name: 146301896
Synonym: Fjoh_4160
Alternate gene names: NA
Gene position: 4991089-4990391 (Counterclockwise)
Preceding gene: 146301897
Following gene: 146301894
Centisome position: 81.86
GC content: 29.33
Gene sequence:
>699_bases ATGACCAACCTTTACATTATTGGTGAACCAAAACCATTATCGAAACCAGAAATTGAAGAAATTGATAATCAAATATCTTT TTCTCTACCTCCAGATTATAAAGCGTTTTTGATACTTTACGGTTTAGGTTCTATAAATGAATTAGTAATGATGCAGCAGC CAGACAAAGATTTCATTAAATCGAATTTTAGCGATTATATGGATTTTTGGACTTTAACCGAAAAAGAAGAACAGCTTATA CTCAATTCACTTACCATTGCAGCAACTATAGACGGAGATATAATTACAGTAATTAACAATAATGAAAATCCTATTGTTTT GCTTCCCCGGCATTCTGACGAAGTAATTTATTTTGAAAACTTAGAAAATGTAATAAACTATTATGCCGAAAAGTATAAGC TGGGAAATGATTTGTATTTTGACCCATCTTATAATTTTGCACAGGAATATATTAGTTTTATAAAAAACGGTTCCTTAAAT AAAACACTATTCGATACTGTTCATCAAATCTTTCTGGATCAAATCCCAGTTGATAAATCATATAATTTACAAACACAACC CAAATATATCATCCAGAAAATTGGTGGCTGGGTCTATTTTGACAACATTGGTAAAAGCGCTGTAAGAGTAAAATATCAAA AACAATTTAAAACAGAAACAGATAAAATTGTCAAATTGATTAATGATCAAATCAAATAA
Upstream 100 bases:
>100_bases TAAAGAGTTTAAAGCTGCTTTTGATGAGCTTCTTAAATTTTACAAGAAAGCCTTAGAAACACAGCATCATGTTATTGTGA GTATACTTTAAAGTAGTAAT
Downstream 100 bases:
>100_bases AAACAAAAGCCGTAAAGATCTTTTTACGGCTTTTGTTTTTAAAACTATTTTATACTGTACAGCGAACCATTTTTAATGGT TTTTTTATCCAGTTTTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTNLYIIGEPKPLSKPEIEEIDNQISFSLPPDYKAFLILYGLGSINELVMMQQPDKDFIKSNFSDYMDFWTLTEKEEQLI LNSLTIAATIDGDIITVINNNENPIVLLPRHSDEVIYFENLENVINYYAEKYKLGNDLYFDPSYNFAQEYISFIKNGSLN KTLFDTVHQIFLDQIPVDKSYNLQTQPKYIIQKIGGWVYFDNIGKSAVRVKYQKQFKTETDKIVKLINDQIK
Sequences:
>Translated_232_residues MTNLYIIGEPKPLSKPEIEEIDNQISFSLPPDYKAFLILYGLGSINELVMMQQPDKDFIKSNFSDYMDFWTLTEKEEQLI LNSLTIAATIDGDIITVINNNENPIVLLPRHSDEVIYFENLENVINYYAEKYKLGNDLYFDPSYNFAQEYISFIKNGSLN KTLFDTVHQIFLDQIPVDKSYNLQTQPKYIIQKIGGWVYFDNIGKSAVRVKYQKQFKTETDKIVKLINDQIK >Mature_231_residues TNLYIIGEPKPLSKPEIEEIDNQISFSLPPDYKAFLILYGLGSINELVMMQQPDKDFIKSNFSDYMDFWTLTEKEEQLIL NSLTIAATIDGDIITVINNNENPIVLLPRHSDEVIYFENLENVINYYAEKYKLGNDLYFDPSYNFAQEYISFIKNGSLNK TLFDTVHQIFLDQIPVDKSYNLQTQPKYIIQKIGGWVYFDNIGKSAVRVKYQKQFKTETDKIVKLINDQIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27041; Mature: 26910
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLYIIGEPKPLSKPEIEEIDNQISFSLPPDYKAFLILYGLGSINELVMMQQPDKDFIK CCEEEEEECCCCCCCCCHHHHCCEEEECCCCCCEEEEEEEECCCHHHEEEECCCCHHHHH SNFSDYMDFWTLTEKEEQLILNSLTIAATIDGDIITVINNNENPIVLLPRHSDEVIYFEN CCHHHHHHHHHCCCHHHHHHHHHEEEEEEECCCEEEEEECCCCCEEEEECCCCCEEEHHH LENVINYYAEKYKLGNDLYFDPSYNFAQEYISFIKNGSLNKTLFDTVHQIFLDQIPVDKS HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC YNLQTQPKYIIQKIGGWVYFDNIGKSAVRVKYQKQFKTETDKIVKLINDQIK CCCCCCHHHHHHHHCCEEEECCCCCCCEEEHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure TNLYIIGEPKPLSKPEIEEIDNQISFSLPPDYKAFLILYGLGSINELVMMQQPDKDFIK CEEEEEECCCCCCCCCHHHHCCEEEECCCCCCEEEEEEEECCCHHHEEEECCCCHHHHH SNFSDYMDFWTLTEKEEQLILNSLTIAATIDGDIITVINNNENPIVLLPRHSDEVIYFEN CCHHHHHHHHHCCCHHHHHHHHHEEEEEEECCCEEEEEECCCCCEEEEECCCCCEEEHHH LENVINYYAEKYKLGNDLYFDPSYNFAQEYISFIKNGSLNKTLFDTVHQIFLDQIPVDKS HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC YNLQTQPKYIIQKIGGWVYFDNIGKSAVRVKYQKQFKTETDKIVKLINDQIK CCCCCCHHHHHHHHCCEEEECCCCCCCEEEHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA