| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301762
Identifier: 146301762
GI number: 146301762
Start: 4802773
End: 4804029
Strand: Reverse
Name: 146301762
Synonym: Fjoh_4024
Alternate gene names: NA
Gene position: 4804029-4802773 (Counterclockwise)
Preceding gene: 146301763
Following gene: 146301745
Centisome position: 78.79
GC content: 35.24
Gene sequence:
>1257_bases ATGAACTATAACAAACTTTTACTTTGTCTTTTATTTACAATGCAGACAGCATTAGGACAAACCAACCCCGACATTAGTTT AAAACAATTAAGCAAACAGCATCAGTATGCTAAAATGGATAGTTTGAACAATAAGGAAAAAGGCAAAGATTATTATTTCT ATAAAGGACTATATGCCAATGTCTGCAATAAACCCAAATTGTCAAACCAGTATTTGGACAGTTTGAAAAACAACGAACTT ACCAATAGTTACGAATTTGCGAAGCTGAAAAATGATAACTATATCAAACTCTTTAATTACAATTTAGCTTATACGGCTTC TAAAGTTTTGACGCTTAAATTTCAAAAACAGTATACCGAAGACGAACTTCAGGACGAATTAAACACACAGCGAATCTGGC AGACTTTACGCAATACACGCTCACAGACAATTGATAAATTTTCTACAATTTCAGTTGCTGCGGTAAAAGACAAAGCAGGT TTAATTACAACCGAAGTTAAAGCAAACGATACACTTTGCAGTTTTGTTTTTGATACCGGAGCAGGAATCAGCTGTATTAC CGAAAGTGTGGCGAAGAAAATGGGAGTTAAAATTCTGCCGGATAATAATATTTCGGTGGCGAGTTTTACGGGACAAAAAA ATAAAGTTCGTATAGGCGTAGCACCCGAAATTAATTTAGGTGAATTGAAAATTCATAATGCCGTGTTTTTAGTATATCCT GATAAGGCATTTACGTTTGCAGACGGCGCTTATGTCATTAACGGAATTATTGGTTTTCCTATAGTAAAAGAGTTAGGAAC GATTACGATTGAAAAAGATAAACTTACCTTTTCTAAAGAATTAGAGACCAATACAACCGAAAAAAACTTATTTGTAGACG AACTCAGAGCGATTGTAATGCTTACGTATAAAGGCAAAACCCTGCCGTTTAATTTTGACAGCGGAGCAAAAGAAAGTCTT TTCAACAAAGCGTTTTACGAAACCTTCAAAACTGATCTTGACCGCATGGGTGCTTTAGAAACCTCTAAATCCTCCAGCGC TGGCGCAGAAGTGGTTTCTACAGAAGTTTTGGTTTTAAAAGACCAGCAACTCTATCTTGGAAAAAAACTAATTCAACTCC CAAAAATGGAAATCGACCAAAAGAACTATGGCGTTTATGGAGAAGTTAATTTTGGAAATATTGGGCAGGATGTATTGGGA CAATTTGAAAAGGTTGTGATTAGTTTTGATGGTAATTATTTGAGGTTGGAGGATTAG
Upstream 100 bases:
>100_bases CTATTCGCATTTCAACTTGAAACAAAACAATTTGGATTTTAAATATTGAAATTTAAATCTTTAGATTTTTCCTATATTTA ACATTCAAAAAATCAGACAA
Downstream 100 bases:
>100_bases GTTCTTTTGAATTTTTCTTTTGAATTTTTCTTTTGATGGTCTTATTTGGACTTTTAGGAAAATCACAGATTTTTTTCAGC CTAAAAAAAGTTTTGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNYNKLLLCLLFTMQTALGQTNPDISLKQLSKQHQYAKMDSLNNKEKGKDYYFYKGLYANVCNKPKLSNQYLDSLKNNEL TNSYEFAKLKNDNYIKLFNYNLAYTASKVLTLKFQKQYTEDELQDELNTQRIWQTLRNTRSQTIDKFSTISVAAVKDKAG LITTEVKANDTLCSFVFDTGAGISCITESVAKKMGVKILPDNNISVASFTGQKNKVRIGVAPEINLGELKIHNAVFLVYP DKAFTFADGAYVINGIIGFPIVKELGTITIEKDKLTFSKELETNTTEKNLFVDELRAIVMLTYKGKTLPFNFDSGAKESL FNKAFYETFKTDLDRMGALETSKSSSAGAEVVSTEVLVLKDQQLYLGKKLIQLPKMEIDQKNYGVYGEVNFGNIGQDVLG QFEKVVISFDGNYLRLED
Sequences:
>Translated_418_residues MNYNKLLLCLLFTMQTALGQTNPDISLKQLSKQHQYAKMDSLNNKEKGKDYYFYKGLYANVCNKPKLSNQYLDSLKNNEL TNSYEFAKLKNDNYIKLFNYNLAYTASKVLTLKFQKQYTEDELQDELNTQRIWQTLRNTRSQTIDKFSTISVAAVKDKAG LITTEVKANDTLCSFVFDTGAGISCITESVAKKMGVKILPDNNISVASFTGQKNKVRIGVAPEINLGELKIHNAVFLVYP DKAFTFADGAYVINGIIGFPIVKELGTITIEKDKLTFSKELETNTTEKNLFVDELRAIVMLTYKGKTLPFNFDSGAKESL FNKAFYETFKTDLDRMGALETSKSSSAGAEVVSTEVLVLKDQQLYLGKKLIQLPKMEIDQKNYGVYGEVNFGNIGQDVLG QFEKVVISFDGNYLRLED >Mature_418_residues MNYNKLLLCLLFTMQTALGQTNPDISLKQLSKQHQYAKMDSLNNKEKGKDYYFYKGLYANVCNKPKLSNQYLDSLKNNEL TNSYEFAKLKNDNYIKLFNYNLAYTASKVLTLKFQKQYTEDELQDELNTQRIWQTLRNTRSQTIDKFSTISVAAVKDKAG LITTEVKANDTLCSFVFDTGAGISCITESVAKKMGVKILPDNNISVASFTGQKNKVRIGVAPEINLGELKIHNAVFLVYP DKAFTFADGAYVINGIIGFPIVKELGTITIEKDKLTFSKELETNTTEKNLFVDELRAIVMLTYKGKTLPFNFDSGAKESL FNKAFYETFKTDLDRMGALETSKSSSAGAEVVSTEVLVLKDQQLYLGKKLIQLPKMEIDQKNYGVYGEVNFGNIGQDVLG QFEKVVISFDGNYLRLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47140; Mature: 47140
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYNKLLLCLLFTMQTALGQTNPDISLKQLSKQHQYAKMDSLNNKEKGKDYYFYKGLYAN CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHH VCNKPKLSNQYLDSLKNNELTNSYEFAKLKNDNYIKLFNYNLAYTASKVLTLKFQKQYTE HCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCEEEECCEEEEEEEHHHCCH DELQDELNTQRIWQTLRNTRSQTIDKFSTISVAAVKDKAGLITTEVKANDTLCSFVFDTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCEEEEEECCC AGISCITESVAKKMGVKILPDNNISVASFTGQKNKVRIGVAPEINLGELKIHNAVFLVYP CCHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECEEEEEEC DKAFTFADGAYVINGIIGFPIVKELGTITIEKDKLTFSKELETNTTEKNLFVDELRAIVM CCCEEEECCHHEEHHHHHHHHHHHCCCEEEECCCCEEEHHCCCCCCHHHHHHHHHHEEEE LTYKGKTLPFNFDSGAKESLFNKAFYETFKTDLDRMGALETSKSSSAGAEVVSTEVLVLK EEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEE DQQLYLGKKLIQLPKMEIDQKNYGVYGEVNFGNIGQDVLGQFEKVVISFDGNYLRLED CCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHEEEEEEECCCEEEECC >Mature Secondary Structure MNYNKLLLCLLFTMQTALGQTNPDISLKQLSKQHQYAKMDSLNNKEKGKDYYFYKGLYAN CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHH VCNKPKLSNQYLDSLKNNELTNSYEFAKLKNDNYIKLFNYNLAYTASKVLTLKFQKQYTE HCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCEEEECCEEEEEEEHHHCCH DELQDELNTQRIWQTLRNTRSQTIDKFSTISVAAVKDKAGLITTEVKANDTLCSFVFDTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCEEEEEECCC AGISCITESVAKKMGVKILPDNNISVASFTGQKNKVRIGVAPEINLGELKIHNAVFLVYP CCHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECEEEEEEC DKAFTFADGAYVINGIIGFPIVKELGTITIEKDKLTFSKELETNTTEKNLFVDELRAIVM CCCEEEECCHHEEHHHHHHHHHHHCCCEEEECCCCEEEHHCCCCCCHHHHHHHHHHEEEE LTYKGKTLPFNFDSGAKESLFNKAFYETFKTDLDRMGALETSKSSSAGAEVVSTEVLVLK EEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEE DQQLYLGKKLIQLPKMEIDQKNYGVYGEVNFGNIGQDVLGQFEKVVISFDGNYLRLED CCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHEEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA