| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301763
Identifier: 146301763
GI number: 146301763
Start: 4804310
End: 4806793
Strand: Reverse
Name: 146301763
Synonym: Fjoh_4025
Alternate gene names: NA
Gene position: 4806793-4804310 (Counterclockwise)
Preceding gene: 146301766
Following gene: 146301762
Centisome position: 78.84
GC content: 42.51
Gene sequence:
>2484_bases ATGAATAATCTAACTTTTAAATTTATGAAAAAAGCTTTTCTAATACTTGTAGTTTGTTTAAGTTCAGTTTTGTTCTCCTG CAAAAAAGATAAAACTACAGATCAGCCCAATACAGACAATGTAAAGTCAGATACCGCTGATACTACATTAATTGCAGATA ACGGCTGGCCTCGTGAAGCCGAAAATAACGGTACAAAACTCGTTTATTATCAGCCTCAGGTCGATGACTGGAAAGATTAT AAAGAAATTACAGCCCGTGTTGCCTTTTCTTTAACCCCAAAAGACGGCAAACAGGTTTTGGGCGTAGCTTCTTTACAAGC CGAAACATTGGTAGATAAAGATAACCGAAGTGCTTTTATTAAAAACCTTCAGGTAACCGATGTCCGATTTCCCGCTCTGG ACAAAAAGAAAGTTCCCGAAATGGAAAAACTCTTTAAAGAAACACTGCCCGTAAGCGGTGATCCTATTTCGGTAGATCGT ATTCTGGCAGATTTAAGCGCAACCAAAAGTCCGGCGAAAGGAATTACAGCTAAAAATGATCCTCCGGCAATTTTTTACAG CACAAATCCGGCAGTTTTGTTGATCGTGCAGGGTGAACCCGTTTTAGTGCCTGTAGAAAAAACAGATATACAATATGTAG TAAATACAAACTGGGATTTATTTTTTGATAAAACAGCAAAAGAATATTCTCTGCTGGCTGAAAATGTCTGGCTGACTTCA AAAAAATTAGATGGTAAATGGGTTAAAACCGCCAAACTGCCTGCCGGTCTCATTAATCTGCCAGCCGGACAAAATTTTGA TGATGTAAAAAAAATGATTCCGCCACCTTCAACCGGAACAGCACCAGAAGTTTTCTACAGCAATAAACCTGCTGAATTAA TTGCCGTAAACGGAAATCCAAAATTCATTAAAATCGATGGAACCAAATTGATGTACATAGACAATACCGAAAATGATGTT TTTGCTGACGAAGCCAATGGACAGTATTATGTATTATTATCCGGAAGATGGTTTAGTTCTAAAGAATTAACAGGACCGTG GAAATATGCCGGAAACAGCCTTCCTGCTGATTTTGCCAAAATTCCTAAAAATTCACCGCGTGCTAATGTATTGTCGTCTG TTCCCGGAACACAGGAAGCCAAAGATGCCGTAATGCTATCGCAGGTTCCTACAACGGCCATTTTAAAAAAATCTGATGCC GAAGCCAAAGTAAAAGTAAACTACGACGGAGCGCCTCAGTTTAAACCTATTGAAGGTACAAAAATGCAGTATGCAAGCAA CACCCAGGAAAAAATTATAAAAGTAGGCGATTTGTATTATTTATGTTTTCAGGCCGTTTGGTTTATGTCGACAAGTCCTA ACGGACCTTGGAAAACCTGTGATTCTGTTCCGAAAGAAATTTATACCATTCCGCCGAGTTCACCTGTGTATAATGTGACA TACGTTACACAAACGACAACCGATACTACTGTAGAAAGCAGTACAACAGCCGGTTATTTTGGGGCTTTTATTATTGGTGC AACGGTAGGCGCAATATTAACGTATGGTACAGGATGGTATTATCCGCCTTATGTGTATTATGGCGGAATGTATCCTATTT ATCGTCCGTGGCCGTATGCCTATGGAGGAGGAGCAGTTTACAATCCGTGGACGGGTGGTTATGCTGTCGGAAGACGTGTG TACGGACCTTATGGTGCGGCTGGAACTTCGGCCTGGTACAATCCCGCAACAGGAAGATACGGACGCTCTGCAAGTGTTCA GGGATGGTATGGCGGTAGAACTGCTGCAAGTACCTACAATCCGTGGACGGGAAATTATGTCAGAACCAATCAGGGACATA ATGCGTATGCACAATGGGGACATTCTGCTGCCACAAATGGCAATCAATGGGCGCAGACAGGACATATTACAACCAGACGC GGTACTGCAATTGGCTATGAAACTTCTGGCGGAAATAAAGGCGTAATTACACATCGTAGAGGCGGAGGAACCACAATTCA TACCAACAATAATGTATATGCTGGTCATGACGGACATGTCTATAAAAGAGATGCTAACGGAAACTGGAGCCATTATAACA ATGGAAACGGCGGCTGGACTCAAGCAGGAACTTTAGGTTCATCCAAAAAATCAGGTGAAGACATTCAGCGTAATAAACCG AATCAGGGATTGGGTGCAAATGAAGCAGGAGAGAGGATTCAGCGTGATAACTTGCCGAAACCGGAACAAAACCTAGGCGG TGAAACCCGATTAGGAGACAGAACCCAGCGCGATAATTTCCCTAAAGCAGATCAAACTCTCGGACAACCAAATAAGCCTC TTGGCGAAGCCGGACGTCCAGACATTACAAAAGATCTCGACCGCTCAGCTTTTTCAAGAGACCGTGGAGAGTCGCAAACC CGAAATTTCCAAAACTTCCAGCATCAAGGTGGTTTTGGCGGCGGAGGCTTTAGAGGTGGCGGCGGTTTTAGAGGCAGAAG ATAG
Upstream 100 bases:
>100_bases TTGAAACCAACTAAACGATTGATTTTTAGTTTTATATCTTCTGTAAATTTAATTTTATTCAAAACAATTTTAAAGGAATA CCCCTGAGAATAAATTTTTA
Downstream 100 bases:
>100_bases ATAAAAGCAAAAGGTTAAATGAACAAGTTGTGAGATGTAAATGCTTTAACCGCAAAGCACGCAAAGTTTTTTACTCATAA GGCTTTGTAAAAGCGCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MNNLTFKFMKKAFLILVVCLSSVLFSCKKDKTTDQPNTDNVKSDTADTTLIADNGWPREAENNGTKLVYYQPQVDDWKDY KEITARVAFSLTPKDGKQVLGVASLQAETLVDKDNRSAFIKNLQVTDVRFPALDKKKVPEMEKLFKETLPVSGDPISVDR ILADLSATKSPAKGITAKNDPPAIFYSTNPAVLLIVQGEPVLVPVEKTDIQYVVNTNWDLFFDKTAKEYSLLAENVWLTS KKLDGKWVKTAKLPAGLINLPAGQNFDDVKKMIPPPSTGTAPEVFYSNKPAELIAVNGNPKFIKIDGTKLMYIDNTENDV FADEANGQYYVLLSGRWFSSKELTGPWKYAGNSLPADFAKIPKNSPRANVLSSVPGTQEAKDAVMLSQVPTTAILKKSDA EAKVKVNYDGAPQFKPIEGTKMQYASNTQEKIIKVGDLYYLCFQAVWFMSTSPNGPWKTCDSVPKEIYTIPPSSPVYNVT YVTQTTTDTTVESSTTAGYFGAFIIGATVGAILTYGTGWYYPPYVYYGGMYPIYRPWPYAYGGGAVYNPWTGGYAVGRRV YGPYGAAGTSAWYNPATGRYGRSASVQGWYGGRTAASTYNPWTGNYVRTNQGHNAYAQWGHSAATNGNQWAQTGHITTRR GTAIGYETSGGNKGVITHRRGGGTTIHTNNNVYAGHDGHVYKRDANGNWSHYNNGNGGWTQAGTLGSSKKSGEDIQRNKP NQGLGANEAGERIQRDNLPKPEQNLGGETRLGDRTQRDNFPKADQTLGQPNKPLGEAGRPDITKDLDRSAFSRDRGESQT RNFQNFQHQGGFGGGGFRGGGGFRGRR
Sequences:
>Translated_827_residues MNNLTFKFMKKAFLILVVCLSSVLFSCKKDKTTDQPNTDNVKSDTADTTLIADNGWPREAENNGTKLVYYQPQVDDWKDY KEITARVAFSLTPKDGKQVLGVASLQAETLVDKDNRSAFIKNLQVTDVRFPALDKKKVPEMEKLFKETLPVSGDPISVDR ILADLSATKSPAKGITAKNDPPAIFYSTNPAVLLIVQGEPVLVPVEKTDIQYVVNTNWDLFFDKTAKEYSLLAENVWLTS KKLDGKWVKTAKLPAGLINLPAGQNFDDVKKMIPPPSTGTAPEVFYSNKPAELIAVNGNPKFIKIDGTKLMYIDNTENDV FADEANGQYYVLLSGRWFSSKELTGPWKYAGNSLPADFAKIPKNSPRANVLSSVPGTQEAKDAVMLSQVPTTAILKKSDA EAKVKVNYDGAPQFKPIEGTKMQYASNTQEKIIKVGDLYYLCFQAVWFMSTSPNGPWKTCDSVPKEIYTIPPSSPVYNVT YVTQTTTDTTVESSTTAGYFGAFIIGATVGAILTYGTGWYYPPYVYYGGMYPIYRPWPYAYGGGAVYNPWTGGYAVGRRV YGPYGAAGTSAWYNPATGRYGRSASVQGWYGGRTAASTYNPWTGNYVRTNQGHNAYAQWGHSAATNGNQWAQTGHITTRR GTAIGYETSGGNKGVITHRRGGGTTIHTNNNVYAGHDGHVYKRDANGNWSHYNNGNGGWTQAGTLGSSKKSGEDIQRNKP NQGLGANEAGERIQRDNLPKPEQNLGGETRLGDRTQRDNFPKADQTLGQPNKPLGEAGRPDITKDLDRSAFSRDRGESQT RNFQNFQHQGGFGGGGFRGGGGFRGRR >Mature_827_residues MNNLTFKFMKKAFLILVVCLSSVLFSCKKDKTTDQPNTDNVKSDTADTTLIADNGWPREAENNGTKLVYYQPQVDDWKDY KEITARVAFSLTPKDGKQVLGVASLQAETLVDKDNRSAFIKNLQVTDVRFPALDKKKVPEMEKLFKETLPVSGDPISVDR ILADLSATKSPAKGITAKNDPPAIFYSTNPAVLLIVQGEPVLVPVEKTDIQYVVNTNWDLFFDKTAKEYSLLAENVWLTS KKLDGKWVKTAKLPAGLINLPAGQNFDDVKKMIPPPSTGTAPEVFYSNKPAELIAVNGNPKFIKIDGTKLMYIDNTENDV FADEANGQYYVLLSGRWFSSKELTGPWKYAGNSLPADFAKIPKNSPRANVLSSVPGTQEAKDAVMLSQVPTTAILKKSDA EAKVKVNYDGAPQFKPIEGTKMQYASNTQEKIIKVGDLYYLCFQAVWFMSTSPNGPWKTCDSVPKEIYTIPPSSPVYNVT YVTQTTTDTTVESSTTAGYFGAFIIGATVGAILTYGTGWYYPPYVYYGGMYPIYRPWPYAYGGGAVYNPWTGGYAVGRRV YGPYGAAGTSAWYNPATGRYGRSASVQGWYGGRTAASTYNPWTGNYVRTNQGHNAYAQWGHSAATNGNQWAQTGHITTRR GTAIGYETSGGNKGVITHRRGGGTTIHTNNNVYAGHDGHVYKRDANGNWSHYNNGNGGWTQAGTLGSSKKSGEDIQRNKP NQGLGANEAGERIQRDNLPKPEQNLGGETRLGDRTQRDNFPKADQTLGQPNKPLGEAGRPDITKDLDRSAFSRDRGESQT RNFQNFQHQGGFGGGGFRGGGGFRGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90691; Mature: 90691
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLTFKFMKKAFLILVVCLSSVLFSCKKDKTTDQPNTDNVKSDTADTTLIADNGWPREA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC ENNGTKLVYYQPQVDDWKDYKEITARVAFSLTPKDGKQVLGVASLQAETLVDKDNRSAFI CCCCCEEEEECCCCCCHHHHHHHHEEEEEEECCCCCCEEEEEHHHHHHHHHCCCCCCEEH KNLQVTDVRFPALDKKKVPEMEKLFKETLPVSGDPISVDRILADLSATKSPAKGITAKND CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC PPAIFYSTNPAVLLIVQGEPVLVPVEKTDIQYVVNTNWDLFFDKTAKEYSLLAENVWLTS CCEEEEECCCEEEEEECCCEEEEEECCCCEEEEEECCCEEEECCCHHHHHHHHHHEEEEC KKLDGKWVKTAKLPAGLINLPAGQNFDDVKKMIPPPSTGTAPEVFYSNKPAELIAVNGNP CCCCCCEEEEECCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCC KFIKIDGTKLMYIDNTENDVFADEANGQYYVLLSGRWFSSKELTGPWKYAGNSLPADFAK CEEEECCEEEEEEECCCCCEEEECCCCEEEEEEECCEECCCCCCCCHHHCCCCCCHHHHH IPKNSPRANVLSSVPGTQEAKDAVMLSQVPTTAILKKSDAEAKVKVNYDGAPQFKPIEGT CCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCC KMQYASNTQEKIIKVGDLYYLCFQAVWFMSTSPNGPWKTCDSVPKEIYTIPPSSPVYNVT EEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCHHEEECCCCCCEEEEE YVTQTTTDTTVESSTTAGYFGAFIIGATVGAILTYGTGWYYPPYVYYGGMYPIYRPWPYA EEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC YGGGAVYNPWTGGYAVGRRVYGPYGAAGTSAWYNPATGRYGRSASVQGWYGGRTAASTYN CCCCCEECCCCCCHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PWTGNYVRTNQGHNAYAQWGHSAATNGNQWAQTGHITTRRGTAIGYETSGGNKGVITHRR CCCCCEEEECCCCCHHHHCCCCCCCCCCCCEECCCEEECCCCEEEEECCCCCCCEEEEEC GGGTTIHTNNNVYAGHDGHVYKRDANGNWSHYNNGNGGWTQAGTLGSSKKSGEDIQRNKP CCCCEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCC NQGLGANEAGERIQRDNLPKPEQNLGGETRLGDRTQRDNFPKADQTLGQPNKPLGEAGRP CCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC DITKDLDRSAFSRDRGESQTRNFQNFQHQGGFGGGGFRGGGGFRGRR CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNNLTFKFMKKAFLILVVCLSSVLFSCKKDKTTDQPNTDNVKSDTADTTLIADNGWPREA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC ENNGTKLVYYQPQVDDWKDYKEITARVAFSLTPKDGKQVLGVASLQAETLVDKDNRSAFI CCCCCEEEEECCCCCCHHHHHHHHEEEEEEECCCCCCEEEEEHHHHHHHHHCCCCCCEEH KNLQVTDVRFPALDKKKVPEMEKLFKETLPVSGDPISVDRILADLSATKSPAKGITAKND CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC PPAIFYSTNPAVLLIVQGEPVLVPVEKTDIQYVVNTNWDLFFDKTAKEYSLLAENVWLTS CCEEEEECCCEEEEEECCCEEEEEECCCCEEEEEECCCEEEECCCHHHHHHHHHHEEEEC KKLDGKWVKTAKLPAGLINLPAGQNFDDVKKMIPPPSTGTAPEVFYSNKPAELIAVNGNP CCCCCCEEEEECCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCC KFIKIDGTKLMYIDNTENDVFADEANGQYYVLLSGRWFSSKELTGPWKYAGNSLPADFAK CEEEECCEEEEEEECCCCCEEEECCCCEEEEEEECCEECCCCCCCCHHHCCCCCCHHHHH IPKNSPRANVLSSVPGTQEAKDAVMLSQVPTTAILKKSDAEAKVKVNYDGAPQFKPIEGT CCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCC KMQYASNTQEKIIKVGDLYYLCFQAVWFMSTSPNGPWKTCDSVPKEIYTIPPSSPVYNVT EEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCHHEEECCCCCCEEEEE YVTQTTTDTTVESSTTAGYFGAFIIGATVGAILTYGTGWYYPPYVYYGGMYPIYRPWPYA EEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC YGGGAVYNPWTGGYAVGRRVYGPYGAAGTSAWYNPATGRYGRSASVQGWYGGRTAASTYN CCCCCEECCCCCCHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PWTGNYVRTNQGHNAYAQWGHSAATNGNQWAQTGHITTRRGTAIGYETSGGNKGVITHRR CCCCCEEEECCCCCHHHHCCCCCCCCCCCCEECCCEEECCCCEEEEECCCCCCCEEEEEC GGGTTIHTNNNVYAGHDGHVYKRDANGNWSHYNNGNGGWTQAGTLGSSKKSGEDIQRNKP CCCCEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCC NQGLGANEAGERIQRDNLPKPEQNLGGETRLGDRTQRDNFPKADQTLGQPNKPLGEAGRP CCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC DITKDLDRSAFSRDRGESQTRNFQNFQHQGGFGGGGFRGGGGFRGRR CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA