| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301407
Identifier: 146301407
GI number: 146301407
Start: 4359148
End: 4360197
Strand: Reverse
Name: 146301407
Synonym: Fjoh_3665
Alternate gene names: NA
Gene position: 4360197-4359148 (Counterclockwise)
Preceding gene: 146301408
Following gene: 146301406
Centisome position: 71.52
GC content: 27.33
Gene sequence:
>1050_bases ATGGTTAAAGACTTTGCAATTGAAAGATTTTTCAAAAAGCATAATTCGAGTCATAAAAATAAATATATTGAAATCTTAGA TCTTAAATTTATAAATAATGGTGATGGAACTGCTTACATAACAAGTGTTGATGTTGAGATATTAAGCTGTAACATAAATA GGTCGCCAAATCTAGTTTTAGAATGTGATATTGAGGATGGAAAAATTAAAATTTATTGTAAAAATTTAGGTTGGGGATCA GCAAAGATCAAAAAATCAATTTTATCAAATTCAGAACTGAAGAAAATAACAAATCAACAGTCATTTGAGTTAATAATTGA ATCTGGTGATAAGAAAAAGATTTTAGAACTTGAACTTAAAATTGATAAGCTCGAGTTTGATGAGATTTTATTGAAAAGAA GCAAGATTTTTTCCCAAATTTCTGAATTGCTTGAGTCAAAAGACAGTAATGTTTTTAATTATAAAGAAATAGATCTTTAT TTGTCAGAAAATGAAAGATGGCATATTGAAGAGTACTTTGAAAATTTAAAAGTGGTTCCGATTTTTGAAGAGAGACAAAA ATGGCATATCCAATATTTTAAACACAAGCAAGTTCAACATGTTCCTGTCAATGAACATCCCCGAATTACTGTTGAATTTT TGGATGAAAATGATAATGAATATAAAAAGAATTTCACAATTGAAAAGTGTGATCTTTGGTTTAATGAAAAAGAGTTGATA AATAACCCAAAACAGTTATACTATAGTCTAAGAAAACCTGAAGATATCTACTTAGTTATTTTGTGTCCAGAAAAAAATAG AAATAAGAAATATAATCTTTCACATTATATTAAAGGTGGTGATGTTGAAAGACTACATTTTTTATTTGCTTCTGAAAAGA CGGCAGATTATGTTGTTCGATTTGTATTCTATTTTAATAAGGGTGAAAAAATCCAGTCGGATTTATTCAAATTATCACTC TATACAGAAAACAGAAAAGACTTTTTTTATGATAAAATTCATGATGGTAGCCATTTTGCATTCAATGATGGTGAATGGAG GCTTGAATGA
Upstream 100 bases:
>100_bases TGATAGCGATTGTTTCATTGGCATTAGGTATTGGAGCTTATTGTATATCTAAATTAAAAAAAAAGCAAAGCCGGAAATAA TAAATGTTTCGGTAGATAAT
Downstream 100 bases:
>100_bases CATTTAAACTTTTAATATATTTAGCCTACTACAACAATAAATTATTTAATTGATTATTTCAATGGAATTAATTACTATTA AAAAATTTTTGAACTACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MVKDFAIERFFKKHNSSHKNKYIEILDLKFINNGDGTAYITSVDVEILSCNINRSPNLVLECDIEDGKIKIYCKNLGWGS AKIKKSILSNSELKKITNQQSFELIIESGDKKKILELELKIDKLEFDEILLKRSKIFSQISELLESKDSNVFNYKEIDLY LSENERWHIEEYFENLKVVPIFEERQKWHIQYFKHKQVQHVPVNEHPRITVEFLDENDNEYKKNFTIEKCDLWFNEKELI NNPKQLYYSLRKPEDIYLVILCPEKNRNKKYNLSHYIKGGDVERLHFLFASEKTADYVVRFVFYFNKGEKIQSDLFKLSL YTENRKDFFYDKIHDGSHFAFNDGEWRLE
Sequences:
>Translated_349_residues MVKDFAIERFFKKHNSSHKNKYIEILDLKFINNGDGTAYITSVDVEILSCNINRSPNLVLECDIEDGKIKIYCKNLGWGS AKIKKSILSNSELKKITNQQSFELIIESGDKKKILELELKIDKLEFDEILLKRSKIFSQISELLESKDSNVFNYKEIDLY LSENERWHIEEYFENLKVVPIFEERQKWHIQYFKHKQVQHVPVNEHPRITVEFLDENDNEYKKNFTIEKCDLWFNEKELI NNPKQLYYSLRKPEDIYLVILCPEKNRNKKYNLSHYIKGGDVERLHFLFASEKTADYVVRFVFYFNKGEKIQSDLFKLSL YTENRKDFFYDKIHDGSHFAFNDGEWRLE >Mature_349_residues MVKDFAIERFFKKHNSSHKNKYIEILDLKFINNGDGTAYITSVDVEILSCNINRSPNLVLECDIEDGKIKIYCKNLGWGS AKIKKSILSNSELKKITNQQSFELIIESGDKKKILELELKIDKLEFDEILLKRSKIFSQISELLESKDSNVFNYKEIDLY LSENERWHIEEYFENLKVVPIFEERQKWHIQYFKHKQVQHVPVNEHPRITVEFLDENDNEYKKNFTIEKCDLWFNEKELI NNPKQLYYSLRKPEDIYLVILCPEKNRNKKYNLSHYIKGGDVERLHFLFASEKTADYVVRFVFYFNKGEKIQSDLFKLSL YTENRKDFFYDKIHDGSHFAFNDGEWRLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41839; Mature: 41839
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKDFAIERFFKKHNSSHKNKYIEILDLKFINNGDGTAYITSVDVEILSCNINRSPNLVL CCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEE ECDIEDGKIKIYCKNLGWGSAKIKKSILSNSELKKITNQQSFELIIESGDKKKILELELK EEECCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCEEEEEEEE IDKLEFDEILLKRSKIFSQISELLESKDSNVFNYKEIDLYLSENERWHIEEYFENLKVVP EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEHHHHHCCCEEEE IFEERQKWHIQYFKHKQVQHVPVNEHPRITVEFLDENDNEYKKNFTIEKCDLWFNEKELI EHHCCCHHHHEEECCCCEEECCCCCCCEEEEEEECCCCCCHHHCCEEEEEEEEECCHHHH NNPKQLYYSLRKPEDIYLVILCPEKNRNKKYNLSHYIKGGDVERLHFLFASEKTADYVVR CCHHHHHEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCHHHHEE FVFYFNKGEKIQSDLFKLSLYTENRKDFFYDKIHDGSHFAFNDGEWRLE EEEEECCCCHHHCCEEEEEEEECCCCCEEHEECCCCCEEEECCCCEEEC >Mature Secondary Structure MVKDFAIERFFKKHNSSHKNKYIEILDLKFINNGDGTAYITSVDVEILSCNINRSPNLVL CCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEE ECDIEDGKIKIYCKNLGWGSAKIKKSILSNSELKKITNQQSFELIIESGDKKKILELELK EEECCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCEEEEEEEE IDKLEFDEILLKRSKIFSQISELLESKDSNVFNYKEIDLYLSENERWHIEEYFENLKVVP EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEHHHHHCCCEEEE IFEERQKWHIQYFKHKQVQHVPVNEHPRITVEFLDENDNEYKKNFTIEKCDLWFNEKELI EHHCCCHHHHEEECCCCEEECCCCCCCEEEEEEECCCCCCHHHCCEEEEEEEEECCHHHH NNPKQLYYSLRKPEDIYLVILCPEKNRNKKYNLSHYIKGGDVERLHFLFASEKTADYVVR CCHHHHHEECCCCCEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCHHHHEE FVFYFNKGEKIQSDLFKLSLYTENRKDFFYDKIHDGSHFAFNDGEWRLE EEEEECCCCHHHCCEEEEEEEECCCCCEEHEECCCCCEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA