Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301408

Identifier: 146301408

GI number: 146301408

Start: 4360588

End: 4362147

Strand: Reverse

Name: 146301408

Synonym: Fjoh_3666

Alternate gene names: NA

Gene position: 4362147-4360588 (Counterclockwise)

Preceding gene: 146301409

Following gene: 146301407

Centisome position: 71.55

GC content: 28.72

Gene sequence:

>1560_bases
ATGGGAATGTTTGACATTAAAGAGCGAAGATTAATTCCTAATTGGAGGGACTTTAAAAGAACTGTGCAATTGGGTGAGTT
GAGTATATCAAATAAAAATATTGATAAAGTAGAAATAAATATCGATCATGTCATTCATGATTGGGGCTATAAAAAAAATG
CAGGAACTGCTGCTGAAATGATTAATGCCTGCTATATTTCAGGAATTGCTAATATTTTAGAAATTAAGGAAGCGATTGAC
TTTATCCATAAAAATCCTGAAAATAGTTCTGAAAGTTTATTAGAGCTGATTAATATTATTAATGAAAGTTCACAACAAGG
GCATCAACAAAATTTCAAGCATTTATTAGAGACTGATTACGAAACAATAGAACAGTTCCAATCTCTTATTAATAATAAAG
TTTTATACAAACTAATTAATAAAACAAAAAATAAAATAAGAGAAGAAATTCTTAATCCAATTAATTGGATTGAATTAGCA
CGTTTATATTCTATAAATGGTCAATCAGATCAGGCAAAACCATCAGTATTAACAGCTTTACATTTAGCCCCTGATAATCG
TTTTATATTGAGATCAGCAACTAGATACTTTATTCACAACGGTGATTATGATCAAGCACTTTATTATCTAAAAAAATCTA
AATCATTAAAAAACGACCCTTGGCTTATTTCTGCTCATATTGCCACTTCTTCTTTAATGAATCGATATTCGCCATTAATT
AAGACAGGTATTAGTTTAACTTCTTCTGGTCAATTTTCAAATTTTGAGTTAACGGAATTGTCTGGTTCTCTCGGTACATT
AGAATTTAATGCAGGATCATTTAAAAATGCAAAACGATTATTTGAAAAATCTATGTTGGCTCCAAATGATAATAGTCTGG
CTCAAATTGAATGGATAGCAAAAGATGACTATAGATTTAAAATAAACCTCTCTGAATTTGATAGTGTAATTAATCCTTTT
GAGGCATATGCTATTGATAAGTTTGAAAAAGGGGATTGGAAAGAAGCCTTTTATAACTGTTTAAAATGGTTTTCGGATAC
TCCATTTTCAAAAAGGCCAATATTACTTGGCTGCTATTTAGCAGGTTCATTGTTAAATGATGTTGATGCTGCAATAACGC
TGTGTAAAATTGGACTAAAAGCCAATCCTCATCATGTTGTACTATTAAATAACATCATTTACTATTCAGCATTAGCTGGT
AAATTTGAAAAAATTGACCATTATTTTGAGCAAATGAATATTTCTACTTTTGAGGATTTGCCAGAAAATGATAAGCCTGT
TATTCAAGCTACTGCTGGATTGACAAATTTTAGAAGAGGAAAAATAGATGATGGGAAAAAATGGTATAAATTAGCGATTG
TAAATAGTGAAAAAATTAAAAACGATTACTTTAAAAATTCAGCGATTCTTAACTATACCAGAGAATTGATAATAAGCAGA
CAGCCAGAAAGATTTGAATATATTGAGACTGTTAAGAAAATGAAATTAGTAAATAAAGATTTAATATTTATAAAAGAAAG
TATTTTAAAATTAAATCAATCAAGTGAAATAGTAATTTAG

Upstream 100 bases:

>100_bases
TTCCTGTCGTATTTTCAACTACTAGAAACCAGTATGATTTCGGTAAGATAGTTACTAAACTGGATATTTTGGCAAAAAAA
TCTTATTTAAAACTTTAGTT

Downstream 100 bases:

>100_bases
ATTCTCTCAAGTTTTAAAAATAATGCTATAGAGTTTACAAGTATCTTTTAAATAATTTTTTAACTTACTTTAGATCAAAG
TTGGTTTTCACATCTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MGMFDIKERRLIPNWRDFKRTVQLGELSISNKNIDKVEINIDHVIHDWGYKKNAGTAAEMINACYISGIANILEIKEAID
FIHKNPENSSESLLELINIINESSQQGHQQNFKHLLETDYETIEQFQSLINNKVLYKLINKTKNKIREEILNPINWIELA
RLYSINGQSDQAKPSVLTALHLAPDNRFILRSATRYFIHNGDYDQALYYLKKSKSLKNDPWLISAHIATSSLMNRYSPLI
KTGISLTSSGQFSNFELTELSGSLGTLEFNAGSFKNAKRLFEKSMLAPNDNSLAQIEWIAKDDYRFKINLSEFDSVINPF
EAYAIDKFEKGDWKEAFYNCLKWFSDTPFSKRPILLGCYLAGSLLNDVDAAITLCKIGLKANPHHVVLLNNIIYYSALAG
KFEKIDHYFEQMNISTFEDLPENDKPVIQATAGLTNFRRGKIDDGKKWYKLAIVNSEKIKNDYFKNSAILNYTRELIISR
QPERFEYIETVKKMKLVNKDLIFIKESILKLNQSSEIVI

Sequences:

>Translated_519_residues
MGMFDIKERRLIPNWRDFKRTVQLGELSISNKNIDKVEINIDHVIHDWGYKKNAGTAAEMINACYISGIANILEIKEAID
FIHKNPENSSESLLELINIINESSQQGHQQNFKHLLETDYETIEQFQSLINNKVLYKLINKTKNKIREEILNPINWIELA
RLYSINGQSDQAKPSVLTALHLAPDNRFILRSATRYFIHNGDYDQALYYLKKSKSLKNDPWLISAHIATSSLMNRYSPLI
KTGISLTSSGQFSNFELTELSGSLGTLEFNAGSFKNAKRLFEKSMLAPNDNSLAQIEWIAKDDYRFKINLSEFDSVINPF
EAYAIDKFEKGDWKEAFYNCLKWFSDTPFSKRPILLGCYLAGSLLNDVDAAITLCKIGLKANPHHVVLLNNIIYYSALAG
KFEKIDHYFEQMNISTFEDLPENDKPVIQATAGLTNFRRGKIDDGKKWYKLAIVNSEKIKNDYFKNSAILNYTRELIISR
QPERFEYIETVKKMKLVNKDLIFIKESILKLNQSSEIVI
>Mature_518_residues
GMFDIKERRLIPNWRDFKRTVQLGELSISNKNIDKVEINIDHVIHDWGYKKNAGTAAEMINACYISGIANILEIKEAIDF
IHKNPENSSESLLELINIINESSQQGHQQNFKHLLETDYETIEQFQSLINNKVLYKLINKTKNKIREEILNPINWIELAR
LYSINGQSDQAKPSVLTALHLAPDNRFILRSATRYFIHNGDYDQALYYLKKSKSLKNDPWLISAHIATSSLMNRYSPLIK
TGISLTSSGQFSNFELTELSGSLGTLEFNAGSFKNAKRLFEKSMLAPNDNSLAQIEWIAKDDYRFKINLSEFDSVINPFE
AYAIDKFEKGDWKEAFYNCLKWFSDTPFSKRPILLGCYLAGSLLNDVDAAITLCKIGLKANPHHVVLLNNIIYYSALAGK
FEKIDHYFEQMNISTFEDLPENDKPVIQATAGLTNFRRGKIDDGKKWYKLAIVNSEKIKNDYFKNSAILNYTRELIISRQ
PERFEYIETVKKMKLVNKDLIFIKESILKLNQSSEIVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59762; Mature: 59631

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMFDIKERRLIPNWRDFKRTVQLGELSISNKNIDKVEINIDHVIHDWGYKKNAGTAAEM
CCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCCEEEEEHHHHEECCCCCCCCCHHHHH
INACYISGIANILEIKEAIDFIHKNPENSSESLLELINIINESSQQGHQQNFKHLLETDY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCH
ETIEQFQSLINNKVLYKLINKTKNKIREEILNPINWIELARLYSINGQSDQAKPSVLTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
HLAPDNRFILRSATRYFIHNGDYDQALYYLKKSKSLKNDPWLISAHIATSSLMNRYSPLI
EECCCCCEEEEHHHHHEEECCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHH
KTGISLTSSGQFSNFELTELSGSLGTLEFNAGSFKNAKRLFEKSMLAPNDNSLAQIEWIA
HHCCCEECCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEE
KDDYRFKINLSEFDSVINPFEAYAIDKFEKGDWKEAFYNCLKWFSDTPFSKRPILLGCYL
CCCEEEEEEHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEHHH
AGSLLNDVDAAITLCKIGLKANPHHVVLLNNIIYYSALAGKFEKIDHYFEQMNISTFEDL
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
PENDKPVIQATAGLTNFRRGKIDDGKKWYKLAIVNSEKIKNDYFKNSAILNYTRELIISR
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHCC
QPERFEYIETVKKMKLVNKDLIFIKESILKLNQSSEIVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GMFDIKERRLIPNWRDFKRTVQLGELSISNKNIDKVEINIDHVIHDWGYKKNAGTAAEM
CCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCCEEEEEHHHHEECCCCCCCCCHHHHH
INACYISGIANILEIKEAIDFIHKNPENSSESLLELINIINESSQQGHQQNFKHLLETDY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCH
ETIEQFQSLINNKVLYKLINKTKNKIREEILNPINWIELARLYSINGQSDQAKPSVLTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
HLAPDNRFILRSATRYFIHNGDYDQALYYLKKSKSLKNDPWLISAHIATSSLMNRYSPLI
EECCCCCEEEEHHHHHEEECCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHH
KTGISLTSSGQFSNFELTELSGSLGTLEFNAGSFKNAKRLFEKSMLAPNDNSLAQIEWIA
HHCCCEECCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEE
KDDYRFKINLSEFDSVINPFEAYAIDKFEKGDWKEAFYNCLKWFSDTPFSKRPILLGCYL
CCCEEEEEEHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEHHH
AGSLLNDVDAAITLCKIGLKANPHHVVLLNNIIYYSALAGKFEKIDHYFEQMNISTFEDL
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
PENDKPVIQATAGLTNFRRGKIDDGKKWYKLAIVNSEKIKNDYFKNSAILNYTRELIISR
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHCC
QPERFEYIETVKKMKLVNKDLIFIKESILKLNQSSEIVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA