| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301406
Identifier: 146301406
GI number: 146301406
Start: 4358036
End: 4358944
Strand: Reverse
Name: 146301406
Synonym: Fjoh_3664
Alternate gene names: NA
Gene position: 4358944-4358036 (Counterclockwise)
Preceding gene: 146301407
Following gene: 146301405
Centisome position: 71.49
GC content: 36.96
Gene sequence:
>909_bases ATGGGGCTTAACATGACAGCGATGGACTATCGTCAATATGATAATGCTTTAGGAAGATTTAATTCTATTGATGCTTTATC AGAAATGAATTATTCTGTATCTCCTTTCACTTTTTCTTATAATAATCCTATTTTTTGGTCTGACCCAACAGGATTACTTT CTCAAGCATTTGTAGATTCTTTAGTACAGAATAGTGATAATGATAAGTCTACCAAATGGGTAAATGATGGCGGTGGAACT TTCTCAAGAGAAGATGGAAGAGGAATGGCTGACCAAGAGACGGGAGAGTTTACTGGGTTTGATGCTTTGAAAGAAGTCAC GGTTACAGGTAGAAAAACTTCTGGTGGTGGCTCTCATCTTGATGGTAATATTGGTGGACTTGCACAAAGTAAAGCTTATA GTTTCGGGAAGTTTTATGAAGGATGGAGGAGTGATTTTAGGACTAAACAAATTGATGATACTCAAGATTGGATGGCTGGA TTAGGAACTGCTGACCCGTCGGGAATAATTGATGGGATTAATGCAGTTGGATATTTATTAAGAGGTCAAACAGGCAATGC GGCGATTGCGGCAATTGCTATACTACCATATGTAGGAGATGCAGCTAAAGGTGCTAAATATTCTAAAGGTGTTCTTAGTG CTTCGGAATTATTAAGAATTGAAAATGCCGCAACTAGAATTGGTAAACCTATAACCGTTGTTGGTAGTAGAGCTAGTGGA ACTGCAAAGGCGTATTCGGATTGGGATTATGTAATAGAAGGAGGATTAAATAGTAAAAATTGGAGTAAAATTAAAAATTC TTTGCCAGGTGCAAAATCAACTATTGATAATATGGCTAGAAATATTGATATTTTTACAGGTGCAGTGAGAACGGAATTGC CACACATAACAGTATTACCTCGTAAATAA
Upstream 100 bases:
>100_bases ATTTATATAGAGATTTTTTGCAAAGGAATCATTCTTTCTATAGAAAAATTTTGCGGACCCTTATAAGTATAAGTACAATG GTCAGGAGTTCCAAGACGAG
Downstream 100 bases:
>100_bases ATATAGAAATGGAATTATTAAAAGAGATTCAAGTAAATAAATTTGGACAAAATTTAGTTGAAATAAATGATTTGTCGAAT GTATTTAGTTTACTAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MGLNMTAMDYRQYDNALGRFNSIDALSEMNYSVSPFTFSYNNPIFWSDPTGLLSQAFVDSLVQNSDNDKSTKWVNDGGGT FSREDGRGMADQETGEFTGFDALKEVTVTGRKTSGGGSHLDGNIGGLAQSKAYSFGKFYEGWRSDFRTKQIDDTQDWMAG LGTADPSGIIDGINAVGYLLRGQTGNAAIAAIAILPYVGDAAKGAKYSKGVLSASELLRIENAATRIGKPITVVGSRASG TAKAYSDWDYVIEGGLNSKNWSKIKNSLPGAKSTIDNMARNIDIFTGAVRTELPHITVLPRK
Sequences:
>Translated_302_residues MGLNMTAMDYRQYDNALGRFNSIDALSEMNYSVSPFTFSYNNPIFWSDPTGLLSQAFVDSLVQNSDNDKSTKWVNDGGGT FSREDGRGMADQETGEFTGFDALKEVTVTGRKTSGGGSHLDGNIGGLAQSKAYSFGKFYEGWRSDFRTKQIDDTQDWMAG LGTADPSGIIDGINAVGYLLRGQTGNAAIAAIAILPYVGDAAKGAKYSKGVLSASELLRIENAATRIGKPITVVGSRASG TAKAYSDWDYVIEGGLNSKNWSKIKNSLPGAKSTIDNMARNIDIFTGAVRTELPHITVLPRK >Mature_301_residues GLNMTAMDYRQYDNALGRFNSIDALSEMNYSVSPFTFSYNNPIFWSDPTGLLSQAFVDSLVQNSDNDKSTKWVNDGGGTF SREDGRGMADQETGEFTGFDALKEVTVTGRKTSGGGSHLDGNIGGLAQSKAYSFGKFYEGWRSDFRTKQIDDTQDWMAGL GTADPSGIIDGINAVGYLLRGQTGNAAIAAIAILPYVGDAAKGAKYSKGVLSASELLRIENAATRIGKPITVVGSRASGT AKAYSDWDYVIEGGLNSKNWSKIKNSLPGAKSTIDNMARNIDIFTGAVRTELPHITVLPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32465; Mature: 32334
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLNMTAMDYRQYDNALGRFNSIDALSEMNYSVSPFTFSYNNPIFWSDPTGLLSQAFVDS CCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCEEECCCHHHHHHHHHHH LVQNSDNDKSTKWVNDGGGTFSREDGRGMADQETGEFTGFDALKEVTVTGRKTSGGGSHL HHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCC DGNIGGLAQSKAYSFGKFYEGWRSDFRTKQIDDTQDWMAGLGTADPSGIIDGINAVGYLL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH RGQTGNAAIAAIAILPYVGDAAKGAKYSKGVLSASELLRIENAATRIGKPITVVGSRASG CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC TAKAYSDWDYVIEGGLNSKNWSKIKNSLPGAKSTIDNMARNIDIFTGAVRTELPHITVLP CCCCCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCEEEEEC RK CC >Mature Secondary Structure GLNMTAMDYRQYDNALGRFNSIDALSEMNYSVSPFTFSYNNPIFWSDPTGLLSQAFVDS CCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCEEECCCHHHHHHHHHHH LVQNSDNDKSTKWVNDGGGTFSREDGRGMADQETGEFTGFDALKEVTVTGRKTSGGGSHL HHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCC DGNIGGLAQSKAYSFGKFYEGWRSDFRTKQIDDTQDWMAGLGTADPSGIIDGINAVGYLL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH RGQTGNAAIAAIAILPYVGDAAKGAKYSKGVLSASELLRIENAATRIGKPITVVGSRASG CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC TAKAYSDWDYVIEGGLNSKNWSKIKNSLPGAKSTIDNMARNIDIFTGAVRTELPHITVLP CCCCCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCEEEEEC RK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA