| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301394
Identifier: 146301394
GI number: 146301394
Start: 4342850
End: 4344070
Strand: Reverse
Name: 146301394
Synonym: Fjoh_3652
Alternate gene names: NA
Gene position: 4344070-4342850 (Counterclockwise)
Preceding gene: 146301402
Following gene: 146301393
Centisome position: 71.25
GC content: 28.67
Gene sequence:
>1221_bases ATGAATTTTGAATTGTCAAATAGGGAAAGAGAATATCTTGGGCTGGAAGAAATAAAACCTAATTGGGAAAAAGTGATTTT AAAAGGAGATACTTACCGCGAACCAAGTATTTTATATTTTGAAGACAATATCATTAAAAGACATATTATATCAACTTCAA ATCAGTACATAGAGACCCAGTATAATGAAATAACCAAAAATAGAGAGATTTTAGTTCCGAAGACAGCTAAAGGAAAGGAA CAGAAATTAACTGCTTCAGTTTTGTCTACAAAAACTCCTATTGGCGTATATGTTTCCTTAAATGTTTTCGGAGATTTCTG GATTGGCAATCACAGTACTAAAACGACTTTTTTTTCGAGCTATTGGGAAGACAGAAAAAAAAGGAAAGAAAATAAATTGA GCTATTGGATTGAAAACTTCATAAATAATTCTGACGAGAATCATTTACGAGAGATCAGTAAATTCAAAAATGCTAATAAG CAAAATGTAAAATATAAATCAGGTGATTTTTTTGCATATAAAGTTGATAGAACAAATTTTAGTTTTGGAAGAGTTTTATT AGATATTACTAAGCTGAGAAAAAATAATATCCTTGAAAAAAGTCACGGATTAACTCTATTAATGGGAACTCCTGTTTTAG TTAAGTTGTATCCATATATTTCAACGAAGAAAAATATAGATATTAAAATTTTGGAAAACTTGACAGCCTTGCCGTCTGAT TTTATGATGGACAATCATCTGCATTATGGAGAATATGAAATTATTGGAAATAAAAAGTTAGAAGATAGTGAATTTGAGTT CCCTATCTCTTATGGTAGAAGTATTAGTTATGAAAGTGCAAATGTTTTTTTGCAATGGGGATTTATCCATAAAGAACTTC CTTTGACTAAATTCAATAAATATATAAGTGGGGAAAATATTTTCCTGCCTGAAGATAGTGCTTCAAGATTTATGTCAAAT CCTTACGGATATTATTCTTGCGGTTTCAGCACTCATTATTACAAAACCGATATTATTGAAACGATTAAGAATAATAATGT TTTTGATTTCAATCGTGATCCATATTACAAAACTGAATTTGATTTAAGAAATCCAAAAAATGATACGTTAAAGAATGAAA TTATGGCAGAATTTGGATTAAATTCAAATTTAAGTTACGATGAAAACTGTAAGATAGCTGGTATTGAATCAACTTCGAAG ATTTTAGAAAATTTAAAATGA
Upstream 100 bases:
>100_bases AAACTTATATCTTTAATTATTGATTTTGAGATTTTAAAAATACTATTTTAGTTGTTTTATAAATTAATAGTAAGCTGTTT TACTTAAAACTAAAAACGTG
Downstream 100 bases:
>100_bases ATTACATAAGATTTTATTGAGAAAAAAGAATGAAAAAAGTTAAGTTCATAGTGGTATTTCTAATGTTTACAATTATTTCA TGCCAGCATACAAATAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNFELSNREREYLGLEEIKPNWEKVILKGDTYREPSILYFEDNIIKRHIISTSNQYIETQYNEITKNREILVPKTAKGKE QKLTASVLSTKTPIGVYVSLNVFGDFWIGNHSTKTTFFSSYWEDRKKRKENKLSYWIENFINNSDENHLREISKFKNANK QNVKYKSGDFFAYKVDRTNFSFGRVLLDITKLRKNNILEKSHGLTLLMGTPVLVKLYPYISTKKNIDIKILENLTALPSD FMMDNHLHYGEYEIIGNKKLEDSEFEFPISYGRSISYESANVFLQWGFIHKELPLTKFNKYISGENIFLPEDSASRFMSN PYGYYSCGFSTHYYKTDIIETIKNNNVFDFNRDPYYKTEFDLRNPKNDTLKNEIMAEFGLNSNLSYDENCKIAGIESTSK ILENLK
Sequences:
>Translated_406_residues MNFELSNREREYLGLEEIKPNWEKVILKGDTYREPSILYFEDNIIKRHIISTSNQYIETQYNEITKNREILVPKTAKGKE QKLTASVLSTKTPIGVYVSLNVFGDFWIGNHSTKTTFFSSYWEDRKKRKENKLSYWIENFINNSDENHLREISKFKNANK QNVKYKSGDFFAYKVDRTNFSFGRVLLDITKLRKNNILEKSHGLTLLMGTPVLVKLYPYISTKKNIDIKILENLTALPSD FMMDNHLHYGEYEIIGNKKLEDSEFEFPISYGRSISYESANVFLQWGFIHKELPLTKFNKYISGENIFLPEDSASRFMSN PYGYYSCGFSTHYYKTDIIETIKNNNVFDFNRDPYYKTEFDLRNPKNDTLKNEIMAEFGLNSNLSYDENCKIAGIESTSK ILENLK >Mature_406_residues MNFELSNREREYLGLEEIKPNWEKVILKGDTYREPSILYFEDNIIKRHIISTSNQYIETQYNEITKNREILVPKTAKGKE QKLTASVLSTKTPIGVYVSLNVFGDFWIGNHSTKTTFFSSYWEDRKKRKENKLSYWIENFINNSDENHLREISKFKNANK QNVKYKSGDFFAYKVDRTNFSFGRVLLDITKLRKNNILEKSHGLTLLMGTPVLVKLYPYISTKKNIDIKILENLTALPSD FMMDNHLHYGEYEIIGNKKLEDSEFEFPISYGRSISYESANVFLQWGFIHKELPLTKFNKYISGENIFLPEDSASRFMSN PYGYYSCGFSTHYYKTDIIETIKNNNVFDFNRDPYYKTEFDLRNPKNDTLKNEIMAEFGLNSNLSYDENCKIAGIESTSK ILENLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47689; Mature: 47689
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFELSNREREYLGLEEIKPNWEKVILKGDTYREPSILYFEDNIIKRHIISTSNQYIETQ CCCCCCCCCHHHCCHHHCCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHH YNEITKNREILVPKTAKGKEQKLTASVLSTKTPIGVYVSLNVFGDFWIGNHSTKTTFFSS HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCHHHHHH YWEDRKKRKENKLSYWIENFINNSDENHLREISKFKNANKQNVKYKSGDFFAYKVDRTNF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCC SFGRVLLDITKLRKNNILEKSHGLTLLMGTPVLVKLYPYISTKKNIDIKILENLTALPSD CHHHHHHHHHHHHHCCCCHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCHH FMMDNHLHYGEYEIIGNKKLEDSEFEFPISYGRSISYESANVFLQWGFIHKELPLTKFNK HHCCCCCCCCCEEEECCCCCCCCCCCCCHHCCCEECCCCCEEEEEEEEEECCCCHHHHHH YISGENIFLPEDSASRFMSNPYGYYSCGFSTHYYKTDIIETIKNNNVFDFNRDPYYKTEF HCCCCEEECCCCHHHHHHCCCCCEEECCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEE DLRNPKNDTLKNEIMAEFGLNSNLSYDENCKIAGIESTSKILENLK CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHCC >Mature Secondary Structure MNFELSNREREYLGLEEIKPNWEKVILKGDTYREPSILYFEDNIIKRHIISTSNQYIETQ CCCCCCCCCHHHCCHHHCCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHH YNEITKNREILVPKTAKGKEQKLTASVLSTKTPIGVYVSLNVFGDFWIGNHSTKTTFFSS HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCHHHHHH YWEDRKKRKENKLSYWIENFINNSDENHLREISKFKNANKQNVKYKSGDFFAYKVDRTNF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCC SFGRVLLDITKLRKNNILEKSHGLTLLMGTPVLVKLYPYISTKKNIDIKILENLTALPSD CHHHHHHHHHHHHHCCCCHHCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCHH FMMDNHLHYGEYEIIGNKKLEDSEFEFPISYGRSISYESANVFLQWGFIHKELPLTKFNK HHCCCCCCCCCEEEECCCCCCCCCCCCCHHCCCEECCCCCEEEEEEEEEECCCCHHHHHH YISGENIFLPEDSASRFMSNPYGYYSCGFSTHYYKTDIIETIKNNNVFDFNRDPYYKTEF HCCCCEEECCCCHHHHHHCCCCCEEECCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEE DLRNPKNDTLKNEIMAEFGLNSNLSYDENCKIAGIESTSKILENLK CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA