| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301393
Identifier: 146301393
GI number: 146301393
Start: 4342164
End: 4342820
Strand: Reverse
Name: 146301393
Synonym: Fjoh_3651
Alternate gene names: NA
Gene position: 4342820-4342164 (Counterclockwise)
Preceding gene: 146301394
Following gene: 146301392
Centisome position: 71.23
GC content: 30.75
Gene sequence:
>657_bases ATGAAAAAAGTTAAGTTCATAGTGGTATTTCTAATGTTTACAATTATTTCATGCCAGCATACAAATAAAAATGACATAGA AAAATCCAATAAAACAGTTTTAGAATTTATAAAAAGTGATAAAATGGATAAGGATGAATTCTGGAAAATAATAGATTATT CAATTGCAAATTCCAAGAATGATAAATTAGAAAAGGAAAAAATTATTGTTGAAAAATTATCAGCTTATTCTCCTGAGCAA ATTATTGAATTTGAAATAATTCTAAGACAGCTCATTATCCAAGCTGACGATTTTAAAACAATGGCTGCTCAAAAAATTAT TGAAGATTATGTGTCTGATGACAGTTATATATATTTTCGCTGTTGGCTAATTGGAAAAGGGGAAGAAATTTATAAGGGAA CTATTAGAAATCCTGATTTTTTGTCAGACAGAATTGCTCAAGACGATGATTTTTATTTTGAAGGTTTGCTGTATGTTGCG ACATCGGCCTATAAAATAAGGACAGGCATAAAAGAGGAAGATGAAAGCTTTCCAAGAGATGTGGCAATTCTAAAAGGTTT AGACTATGATTTTGTGGCACCGCCAACAAAAGGCGTGGATTGGAAAGAGGAAGATCTACCGAGAACTTATCCTAAATTGT GGAGGCTTTTTAATTGA
Upstream 100 bases:
>100_bases TAAGTTACGATGAAAACTGTAAGATAGCTGGTATTGAATCAACTTCGAAGATTTTAGAAAATTTAAAATGAATTACATAA GATTTTATTGAGAAAAAAGA
Downstream 100 bases:
>100_bases AAAAAACTGCCCATATATATGAAATGAAGTAAACAAAACAAACATCGTAGAAAATATGATATTAAGCCAAGCAATTATAA ACTGTATGGATTATAAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKKVKFIVVFLMFTIISCQHTNKNDIEKSNKTVLEFIKSDKMDKDEFWKIIDYSIANSKNDKLEKEKIIVEKLSAYSPEQ IIEFEIILRQLIIQADDFKTMAAQKIIEDYVSDDSYIYFRCWLIGKGEEIYKGTIRNPDFLSDRIAQDDDFYFEGLLYVA TSAYKIRTGIKEEDESFPRDVAILKGLDYDFVAPPTKGVDWKEEDLPRTYPKLWRLFN
Sequences:
>Translated_218_residues MKKVKFIVVFLMFTIISCQHTNKNDIEKSNKTVLEFIKSDKMDKDEFWKIIDYSIANSKNDKLEKEKIIVEKLSAYSPEQ IIEFEIILRQLIIQADDFKTMAAQKIIEDYVSDDSYIYFRCWLIGKGEEIYKGTIRNPDFLSDRIAQDDDFYFEGLLYVA TSAYKIRTGIKEEDESFPRDVAILKGLDYDFVAPPTKGVDWKEEDLPRTYPKLWRLFN >Mature_218_residues MKKVKFIVVFLMFTIISCQHTNKNDIEKSNKTVLEFIKSDKMDKDEFWKIIDYSIANSKNDKLEKEKIIVEKLSAYSPEQ IIEFEIILRQLIIQADDFKTMAAQKIIEDYVSDDSYIYFRCWLIGKGEEIYKGTIRNPDFLSDRIAQDDDFYFEGLLYVA TSAYKIRTGIKEEDESFPRDVAILKGLDYDFVAPPTKGVDWKEEDLPRTYPKLWRLFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25740; Mature: 25740
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVKFIVVFLMFTIISCQHTNKNDIEKSNKTVLEFIKSDKMDKDEFWKIIDYSIANSKN CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC DKLEKEKIIVEKLSAYSPEQIIEFEIILRQLIIQADDFKTMAAQKIIEDYVSDDSYIYFR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE CWLIGKGEEIYKGTIRNPDFLSDRIAQDDDFYFEGLLYVATSAYKIRTGIKEEDESFPRD EEEEECCCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHH VAILKGLDYDFVAPPTKGVDWKEEDLPRTYPKLWRLFN HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKKVKFIVVFLMFTIISCQHTNKNDIEKSNKTVLEFIKSDKMDKDEFWKIIDYSIANSKN CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC DKLEKEKIIVEKLSAYSPEQIIEFEIILRQLIIQADDFKTMAAQKIIEDYVSDDSYIYFR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE CWLIGKGEEIYKGTIRNPDFLSDRIAQDDDFYFEGLLYVATSAYKIRTGIKEEDESFPRD EEEEECCCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHH VAILKGLDYDFVAPPTKGVDWKEEDLPRTYPKLWRLFN HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA