| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301402
Identifier: 146301402
GI number: 146301402
Start: 4353542
End: 4354561
Strand: Reverse
Name: 146301402
Synonym: Fjoh_3660
Alternate gene names: NA
Gene position: 4354561-4353542 (Counterclockwise)
Preceding gene: 146301403
Following gene: 146301394
Centisome position: 71.42
GC content: 26.37
Gene sequence:
>1020_bases ATGCTAGCCAAAACACTTAAAAACATCAGAATAACAAAAATGGATAATAAACCTCTTGAAAAACAAGCACAAAGCTTTAT AATCTCTCAACTTATAAAATTTGACTTTAAGGTAAATGAACTTTCTTTCGACGAAAAAGGTTCGGACTTATATATAATCA AACAAACAAAAAAACATCATTTAAAATATTTGACAATACAATGCAAAGGCAGGAAACTTAATGACAAAAATACTTCGGTT AGAATACCCGTTTCATACGTTGAAAATAATTTTATCTTATTTATTTATACTATAGACGATGAGAAAAATGAAAATCTCTT TTTGTTTTTCCCAGAACAAATTAAAGAGTGGAAAATAAACAGCAAAAATGAGTATTCCGTGTCTATAAATAAAGATAGAA TAAAACAGATAGGTTTTCAAGAAAAGATTTTTAATAAGCAATTAGCATATAAGATTGATGAACTCTTGAAAGATGTAAAA GAATATACTTCAATATTTATTGATGGCATATTTTTAGAAAAATCCATAGATTGGGCATACAAAACTTATTCTGAAATTTG GCCAGAAAAAAAACTCAAAAAGCCTAATTTAATTGATGTTATTAATAACATTCTTGAATTCTATAATCGATATAAAACCG AAAAAAAAATAATAAATTGTACTTTGTTTTTAAGTAGTTCTTTTAGTTTAGAACAACGAATTAACATTGACTATGAAAAC TTAAAATTTCAAACTAAAAATGGCAATCAAGTAAGGATACTTATTAATAAAACAAATGAAATAATTGCTTTTGAAATATT TGAAGAATTAGATCGTTTAATCGACAATGATAATATAGTTCTTGTAGCAAGTGATCAGATATATGAACATGAACTTTCAC AATTAAAAAGCAAAGGATATGACATGATCATTGTTAGGTCAAATTATCGCGATGGTAGTGACATGTATTCAGAATTTCGA TGGGGAGATGTTACATTAGCTATAGGATTAGCATTTGGATTAGAGCGTCACGAATTATAA
Upstream 100 bases:
>100_bases GTCTATTAAAAGTTGGTTTTGTATTTGCAAAATTTGAGTTTAATTGAAATAAATCGCATTTTAATCCCAACCTGTGCCTA TTAGCAGAAGGTTGTAGGAA
Downstream 100 bases:
>100_bases GCACTTCCTACAACAGCTACTACAGCGGATTTGGGCAATTGCAAAAAAAAAGTTAGTACTACCAAACTTTCAAGAACAGA ACATAAAGATTTAATATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLAKTLKNIRITKMDNKPLEKQAQSFIISQLIKFDFKVNELSFDEKGSDLYIIKQTKKHHLKYLTIQCKGRKLNDKNTSV RIPVSYVENNFILFIYTIDDEKNENLFLFFPEQIKEWKINSKNEYSVSINKDRIKQIGFQEKIFNKQLAYKIDELLKDVK EYTSIFIDGIFLEKSIDWAYKTYSEIWPEKKLKKPNLIDVINNILEFYNRYKTEKKIINCTLFLSSSFSLEQRINIDYEN LKFQTKNGNQVRILINKTNEIIAFEIFEELDRLIDNDNIVLVASDQIYEHELSQLKSKGYDMIIVRSNYRDGSDMYSEFR WGDVTLAIGLAFGLERHEL
Sequences:
>Translated_339_residues MLAKTLKNIRITKMDNKPLEKQAQSFIISQLIKFDFKVNELSFDEKGSDLYIIKQTKKHHLKYLTIQCKGRKLNDKNTSV RIPVSYVENNFILFIYTIDDEKNENLFLFFPEQIKEWKINSKNEYSVSINKDRIKQIGFQEKIFNKQLAYKIDELLKDVK EYTSIFIDGIFLEKSIDWAYKTYSEIWPEKKLKKPNLIDVINNILEFYNRYKTEKKIINCTLFLSSSFSLEQRINIDYEN LKFQTKNGNQVRILINKTNEIIAFEIFEELDRLIDNDNIVLVASDQIYEHELSQLKSKGYDMIIVRSNYRDGSDMYSEFR WGDVTLAIGLAFGLERHEL >Mature_339_residues MLAKTLKNIRITKMDNKPLEKQAQSFIISQLIKFDFKVNELSFDEKGSDLYIIKQTKKHHLKYLTIQCKGRKLNDKNTSV RIPVSYVENNFILFIYTIDDEKNENLFLFFPEQIKEWKINSKNEYSVSINKDRIKQIGFQEKIFNKQLAYKIDELLKDVK EYTSIFIDGIFLEKSIDWAYKTYSEIWPEKKLKKPNLIDVINNILEFYNRYKTEKKIINCTLFLSSSFSLEQRINIDYEN LKFQTKNGNQVRILINKTNEIIAFEIFEELDRLIDNDNIVLVASDQIYEHELSQLKSKGYDMIIVRSNYRDGSDMYSEFR WGDVTLAIGLAFGLERHEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40299; Mature: 40299
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKTLKNIRITKMDNKPLEKQAQSFIISQLIKFDFKVNELSFDEKGSDLYIIKQTKKHH CCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCC LKYLTIQCKGRKLNDKNTSVRIPVSYVENNFILFIYTIDDEKNENLFLFFPEQIKEWKIN EEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECHHHHCCCCC SKNEYSVSINKDRIKQIGFQEKIFNKQLAYKIDELLKDVKEYTSIFIDGIFLEKSIDWAY CCCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHH KTYSEIWPEKKLKKPNLIDVINNILEFYNRYKTEKKIINCTLFLSSSFSLEQRINIDYEN HHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHEECCCHHH LKFQTKNGNQVRILINKTNEIIAFEIFEELDRLIDNDNIVLVASDQIYEHELSQLKSKGY EEEEECCCCEEEEEEECCCCEEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCC DMIIVRSNYRDGSDMYSEFRWGDVTLAIGLAFGLERHEL CEEEEECCCCCCHHHHHHCCCCCEEEEEEHHHCCHHCCC >Mature Secondary Structure MLAKTLKNIRITKMDNKPLEKQAQSFIISQLIKFDFKVNELSFDEKGSDLYIIKQTKKHH CCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCC LKYLTIQCKGRKLNDKNTSVRIPVSYVENNFILFIYTIDDEKNENLFLFFPEQIKEWKIN EEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECHHHHCCCCC SKNEYSVSINKDRIKQIGFQEKIFNKQLAYKIDELLKDVKEYTSIFIDGIFLEKSIDWAY CCCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHH KTYSEIWPEKKLKKPNLIDVINNILEFYNRYKTEKKIINCTLFLSSSFSLEQRINIDYEN HHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHEECCCHHH LKFQTKNGNQVRILINKTNEIIAFEIFEELDRLIDNDNIVLVASDQIYEHELSQLKSKGY EEEEECCCCEEEEEEECCCCEEEHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCC DMIIVRSNYRDGSDMYSEFRWGDVTLAIGLAFGLERHEL CEEEEECCCCCCHHHHHHCCCCCEEEEEEHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA