| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is hisD [H]
Identifier: 146300626
GI number: 146300626
Start: 3413728
End: 3415011
Strand: Reverse
Name: hisD [H]
Synonym: Fjoh_2877
Alternate gene names: 146300626
Gene position: 3415011-3413728 (Counterclockwise)
Preceding gene: 146300627
Following gene: 146300625
Centisome position: 56.01
GC content: 36.6
Gene sequence:
>1284_bases ATGAATAAAATAGACAATCCAAAACCAGATACTTGGTCTGAAATATTAAAAAGACCAACCCAGACAATAGACGATATTGA AGTAACCGTAAAAGAAATCTTCAAAGAAATTCAAAAAAAGGGTGACGAAGCGGTAGCAAAATATACCTCAATTTTTGATG GAATTGCTTTAGACAGCTACGAAGTTACAAAGGAAGAAATACAAGAAGCAATTGAAAAGATTCCCAATGATTTGAAAGAA TCAATTCAATTGGCAAAAGACAATATTTATAAATTTCACAGCGCTCAAAAAACAAACAGGATTGACGTTGAAACTATCGA AGGCGTAAACTGCTGGCAGGAAAAAAGACCAATTCAAAAAATTGGATTGTATATTCCGGGCGGTACAGCACCTTTATTTT CAACAGTTTTGATGCTGGCAGTTCCAGCAGAGATTGCAGGATGTAAAGAAATAGTATTATGCTCGCCGCCAGATAAAAAA GGAAAAATTAATCCGGCAATTTTATATGCTGCTAATTTATGCGGTGTAACTAAAATTATAAAAGCAGGCGGAATTCAGGC AATTGCAGGGATGACCTTCGGTACACAATCTATTCCAAAAGTGTATAAAATTTTTGGACCTGGTAATCAGTTTGTAACCG TTGCCAAACAATTAGCGACACAATTTGGAGTAGCAATTGATATGCCGGCCGGACCTTCAGAATTATTAATTGTAGCCGAT GATACAGCAGTTCCGGCTTTTGTAGCTTCTGATTTGCTTTCTCAGGCAGAACACGGAACAGACAGTCAGGTAATTTTGGT TTCGACTTCAAAAAAATTGATTGCCGAAGTAGAAAAAGAAGTTCAGTCACAGCTCGAAGTTCTTCCAAGAAAAGCTATTG CAGAGAAAGCAATCGAAAATTCAAAACTAATTTATGTTGAAAATGATCAGAGAGCTTTAGATTTAATTAACGAATACGGT CCGGAACACTTTATAATCTGCTCTCAATATGATGATTTTTACTGTAACGGAATTGTAAACGCGGGTTCTGTTTTTATTGG AAATTATACGCCGGAAAGCGCCGGAGATTACGCTTCAGGTACCAATCATACTTTACCAACCAATGGTTACGCTAAGAATT ACAGCGGTGTAAATCTGGATAGTTTTATGAAATCAATGACATTCCAGAAAATTTCTGAAAAAGGAATTCAAAACATCGGA AAAGCAATCGAAACTATGGCTGAGGCCGAAGGGCTGCAAGCGCATAAAAATGCTGTGACGTTAAGATTAAAGAGTTTAGA GTAA
Upstream 100 bases:
>100_bases TTAAGCTTTAGGCTTTTGAAAAGTTTGCTCCTTAAGAAAAAAATAAACACAACGTTAATAAAGCCTAAAGCCCACAGCTT AAAGCTTAAAGCTTAAGAAA
Downstream 100 bases:
>100_bases AAGACAAAGGAAGAAGAAAGAAGCAAGAGTTAAGATTTTTTAAAGTCTTTCTTTTTAATTCTTGCTTCTTAAAAAATTAA AGCAATGAATACGTTCGATA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MNKIDNPKPDTWSEILKRPTQTIDDIEVTVKEIFKEIQKKGDEAVAKYTSIFDGIALDSYEVTKEEIQEAIEKIPNDLKE SIQLAKDNIYKFHSAQKTNRIDVETIEGVNCWQEKRPIQKIGLYIPGGTAPLFSTVLMLAVPAEIAGCKEIVLCSPPDKK GKINPAILYAANLCGVTKIIKAGGIQAIAGMTFGTQSIPKVYKIFGPGNQFVTVAKQLATQFGVAIDMPAGPSELLIVAD DTAVPAFVASDLLSQAEHGTDSQVILVSTSKKLIAEVEKEVQSQLEVLPRKAIAEKAIENSKLIYVENDQRALDLINEYG PEHFIICSQYDDFYCNGIVNAGSVFIGNYTPESAGDYASGTNHTLPTNGYAKNYSGVNLDSFMKSMTFQKISEKGIQNIG KAIETMAEAEGLQAHKNAVTLRLKSLE
Sequences:
>Translated_427_residues MNKIDNPKPDTWSEILKRPTQTIDDIEVTVKEIFKEIQKKGDEAVAKYTSIFDGIALDSYEVTKEEIQEAIEKIPNDLKE SIQLAKDNIYKFHSAQKTNRIDVETIEGVNCWQEKRPIQKIGLYIPGGTAPLFSTVLMLAVPAEIAGCKEIVLCSPPDKK GKINPAILYAANLCGVTKIIKAGGIQAIAGMTFGTQSIPKVYKIFGPGNQFVTVAKQLATQFGVAIDMPAGPSELLIVAD DTAVPAFVASDLLSQAEHGTDSQVILVSTSKKLIAEVEKEVQSQLEVLPRKAIAEKAIENSKLIYVENDQRALDLINEYG PEHFIICSQYDDFYCNGIVNAGSVFIGNYTPESAGDYASGTNHTLPTNGYAKNYSGVNLDSFMKSMTFQKISEKGIQNIG KAIETMAEAEGLQAHKNAVTLRLKSLE >Mature_427_residues MNKIDNPKPDTWSEILKRPTQTIDDIEVTVKEIFKEIQKKGDEAVAKYTSIFDGIALDSYEVTKEEIQEAIEKIPNDLKE SIQLAKDNIYKFHSAQKTNRIDVETIEGVNCWQEKRPIQKIGLYIPGGTAPLFSTVLMLAVPAEIAGCKEIVLCSPPDKK GKINPAILYAANLCGVTKIIKAGGIQAIAGMTFGTQSIPKVYKIFGPGNQFVTVAKQLATQFGVAIDMPAGPSELLIVAD DTAVPAFVASDLLSQAEHGTDSQVILVSTSKKLIAEVEKEVQSQLEVLPRKAIAEKAIENSKLIYVENDQRALDLINEYG PEHFIICSQYDDFYCNGIVNAGSVFIGNYTPESAGDYASGTNHTLPTNGYAKNYSGVNLDSFMKSMTFQKISEKGIQNIG KAIETMAEAEGLQAHKNAVTLRLKSLE
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=417, Percent_Identity=51.0791366906475, Blast_Score=428, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6319819, Length=418, Percent_Identity=49.7607655502392, Blast_Score=397, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46657; Mature: 46657
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIDNPKPDTWSEILKRPTQTIDDIEVTVKEIFKEIQKKGDEAVAKYTSIFDGIALDSY CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH EVTKEEIQEAIEKIPNDLKESIQLAKDNIYKFHSAQKTNRIDVETIEGVNCWQEKRPIQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCHHH IGLYIPGGTAPLFSTVLMLAVPAEIAGCKEIVLCSPPDKKGKINPAILYAANLCGVTKII HCEECCCCCHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCCHHEEEHHHHHHHHHHH KAGGIQAIAGMTFGTQSIPKVYKIFGPGNQFVTVAKQLATQFGVAIDMPAGPSELLIVAD HHCCCCEECCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEC DTAVPAFVASDLLSQAEHGTDSQVILVSTSKKLIAEVEKEVQSQLEVLPRKAIAEKAIEN CCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKLIYVENDQRALDLINEYGPEHFIICSQYDDFYCNGIVNAGSVFIGNYTPESAGDYASG CEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCCCEEECCCCCCCCCCCCCC TNHTLPTNGYAKNYSGVNLDSFMKSMTFQKISEKGIQNIGKAIETMAEAEGLQAHKNAVT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEE LRLKSLE EEEECCC >Mature Secondary Structure MNKIDNPKPDTWSEILKRPTQTIDDIEVTVKEIFKEIQKKGDEAVAKYTSIFDGIALDSY CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH EVTKEEIQEAIEKIPNDLKESIQLAKDNIYKFHSAQKTNRIDVETIEGVNCWQEKRPIQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCHHH IGLYIPGGTAPLFSTVLMLAVPAEIAGCKEIVLCSPPDKKGKINPAILYAANLCGVTKII HCEECCCCCHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCCHHEEEHHHHHHHHHHH KAGGIQAIAGMTFGTQSIPKVYKIFGPGNQFVTVAKQLATQFGVAIDMPAGPSELLIVAD HHCCCCEECCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEC DTAVPAFVASDLLSQAEHGTDSQVILVSTSKKLIAEVEKEVQSQLEVLPRKAIAEKAIEN CCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKLIYVENDQRALDLINEYGPEHFIICSQYDDFYCNGIVNAGSVFIGNYTPESAGDYASG CEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCCCEEECCCCCCCCCCCCCC TNHTLPTNGYAKNYSGVNLDSFMKSMTFQKISEKGIQNIGKAIETMAEAEGLQAHKNAVT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEE LRLKSLE EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]