| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is hisC
Identifier: 146300625
GI number: 146300625
Start: 3412594
End: 3413643
Strand: Reverse
Name: hisC
Synonym: Fjoh_2876
Alternate gene names: 146300625
Gene position: 3413643-3412594 (Counterclockwise)
Preceding gene: 146300626
Following gene: 146300624
Centisome position: 55.99
GC content: 32.19
Gene sequence:
>1050_bases ATGAATACGTTCGATATAAATACAATAACAAGAGAAAACGTAAAATCTTTAAAACCATATTCTTCAGCAAGAGATGAATT TGAAGATTTTGATACAGCCGAAATGATTTTTCTGGATGCTAATGAAAATCCGTTTCAAAATGGTGTAAACCGTTACCCGG ATCCGCAGCAAAACTCAGTTAAAGCGATTTTGGCTAAAAACAATAATACAAAACAAAGTCAGATTTTATTAGGAAACGGA AGCGATGAAGTTTTAGATTTACTTTTCAGAGCTTTTTGCGAACCAAATAAAGACAATATCATTTCATTGCCGCCAACTTA CGGTATGTATGGTGTTTTAGCAAATATCAATGCGGTAGAAAACAGAGAAATTTTGCTGACAACTGATTTTCAGCCACAAG TTGAAAAGATTTTAGAAGCAGTTGATGAAAATACCAAAATCATCTTTTTATGTTCGCCAAACAATCCAACAGGAAATTCA TTTTCTGATGAAAGTGTGGTGAAACTGCTTCAAAACTTCAAAGGTCTAGTGGTTATTGACGAAGCGTATATTGACTTTTC AGAAAAGGAAAGCTGGCTGACAGAAATCGATGAATATCCGAATTTAGTAATTACACAAACGCTTTCTAAGGCTTATGGTT TAGCAGGAATTCGTTTAGGGATTTGTTATGCATCAGAGGCTGTAATCTCGGTTTTAAATAAAATCAAACCGCCTTATAAT GTAAACGAATTAACGCAGCAAAGGGCGAAAGAGCGTTTAAAAGATTTAGATAAAATTAAGCAAGAAATAGCTTCAATTAT TGAGCAAAGAGAAGAATTGCTTAAAGTTTTACTTGAAGTAAATTTTGTTGAAAAAGTATATCCAACAGAAGCTAATTTTA TCTTAGCAAAAGTGGATGATGCTAATAAAAGATACAATCAATTAATCGAAAAAGGAATCGTTATTCGTAACAGAACAACA CAGCCTTTATGTGAAAATTGTCTTCGTTTTACAATTGGAACAAAAGAAGAAAATGCGGTTGTAATTAAAGAATTAAAATT ATTGAACTAA
Upstream 100 bases:
>100_bases AAAGAGTTTAGAGTAAAAGACAAAGGAAGAAGAAAGAAGCAAGAGTTAAGATTTTTTAAAGTCTTTCTTTTTAATTCTTG CTTCTTAAAAAATTAAAGCA
Downstream 100 bases:
>100_bases AAATATTAGCCACAGATTATACAGATTAAAATGATTTCTTTCTGTGTATGATTTTTCGCCACGAATTGCACGAATTAGCA CAAATTAAATTAGTGAAAAT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNTFDINTITRENVKSLKPYSSARDEFEDFDTAEMIFLDANENPFQNGVNRYPDPQQNSVKAILAKNNNTKQSQILLGNG SDEVLDLLFRAFCEPNKDNIISLPPTYGMYGVLANINAVENREILLTTDFQPQVEKILEAVDENTKIIFLCSPNNPTGNS FSDESVVKLLQNFKGLVVIDEAYIDFSEKESWLTEIDEYPNLVITQTLSKAYGLAGIRLGICYASEAVISVLNKIKPPYN VNELTQQRAKERLKDLDKIKQEIASIIEQREELLKVLLEVNFVEKVYPTEANFILAKVDDANKRYNQLIEKGIVIRNRTT QPLCENCLRFTIGTKEENAVVIKELKLLN
Sequences:
>Translated_349_residues MNTFDINTITRENVKSLKPYSSARDEFEDFDTAEMIFLDANENPFQNGVNRYPDPQQNSVKAILAKNNNTKQSQILLGNG SDEVLDLLFRAFCEPNKDNIISLPPTYGMYGVLANINAVENREILLTTDFQPQVEKILEAVDENTKIIFLCSPNNPTGNS FSDESVVKLLQNFKGLVVIDEAYIDFSEKESWLTEIDEYPNLVITQTLSKAYGLAGIRLGICYASEAVISVLNKIKPPYN VNELTQQRAKERLKDLDKIKQEIASIIEQREELLKVLLEVNFVEKVYPTEANFILAKVDDANKRYNQLIEKGIVIRNRTT QPLCENCLRFTIGTKEENAVVIKELKLLN >Mature_349_residues MNTFDINTITRENVKSLKPYSSARDEFEDFDTAEMIFLDANENPFQNGVNRYPDPQQNSVKAILAKNNNTKQSQILLGNG SDEVLDLLFRAFCEPNKDNIISLPPTYGMYGVLANINAVENREILLTTDFQPQVEKILEAVDENTKIIFLCSPNNPTGNS FSDESVVKLLQNFKGLVVIDEAYIDFSEKESWLTEIDEYPNLVITQTLSKAYGLAGIRLGICYASEAVISVLNKIKPPYN VNELTQQRAKERLKDLDKIKQEIASIIEQREELLKVLLEVNFVEKVYPTEANFILAKVDDANKRYNQLIEKGIVIRNRTT QPLCENCLRFTIGTKEENAVVIKELKLLN
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=357, Percent_Identity=38.655462184874, Blast_Score=249, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6322075, Length=380, Percent_Identity=39.7368421052632, Blast_Score=242, Evalue=6e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_FLAJ1 (A5FFY0)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001195216.1 - ProteinModelPortal: A5FFY0 - SMR: A5FFY0 - STRING: A5FFY0 - GeneID: 5092696 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_2876 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: NLCLGVG - ProtClustDB: CLSK2784490 - BioCyc: FJOH376686:FJOH_2876-MONOMER - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39654; Mature: 39654
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFDINTITRENVKSLKPYSSARDEFEDFDTAEMIFLDANENPFQNGVNRYPDPQQNSV CCCEECCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCE KAILAKNNNTKQSQILLGNGSDEVLDLLFRAFCEPNKDNIISLPPTYGMYGVLANINAVE EEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHCCCCCC NREILLTTDFQPQVEKILEAVDENTKIIFLCSPNNPTGNSFSDESVVKLLQNFKGLVVID CCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE EAYIDFSEKESWLTEIDEYPNLVITQTLSKAYGLAGIRLGICYASEAVISVLNKIKPPYN HHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHCCCCCC VNELTQQRAKERLKDLDKIKQEIASIIEQREELLKVLLEVNFVEKVYPTEANFILAKVDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC ANKRYNQLIEKGIVIRNRTTQPLCENCLRFTIGTKEENAVVIKELKLLN HHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHCC >Mature Secondary Structure MNTFDINTITRENVKSLKPYSSARDEFEDFDTAEMIFLDANENPFQNGVNRYPDPQQNSV CCCEECCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCE KAILAKNNNTKQSQILLGNGSDEVLDLLFRAFCEPNKDNIISLPPTYGMYGVLANINAVE EEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHCCCCCC NREILLTTDFQPQVEKILEAVDENTKIIFLCSPNNPTGNSFSDESVVKLLQNFKGLVVID CCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE EAYIDFSEKESWLTEIDEYPNLVITQTLSKAYGLAGIRLGICYASEAVISVLNKIKPPYN HHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHCCCCCC VNELTQQRAKERLKDLDKIKQEIASIIEQREELLKVLLEVNFVEKVYPTEANFILAKVDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC ANKRYNQLIEKGIVIRNRTTQPLCENCLRFTIGTKEENAVVIKELKLLN HHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA