| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300229
Identifier: 146300229
GI number: 146300229
Start: 2962125
End: 2962748
Strand: Direct
Name: 146300229
Synonym: Fjoh_2474
Alternate gene names: NA
Gene position: 2962125-2962748 (Clockwise)
Preceding gene: 146300228
Following gene: 146300230
Centisome position: 48.58
GC content: 27.08
Gene sequence:
>624_bases ATGAAGAAAATCTTTTGCTTATTTATTATTGTTTTTAGTGTGATAGCTTGTTATGATAAAAAGTCAAAGAATTTATCAAT AGAAGACGAAGGAACTCCAATTGTAAAATCGGTTAGTAGAACAATTTATAAAAGAGAATTTCCAATAAAGGATTTTTCCA AAATTGAAGTTGTTTCTTATTATGACAGAATAATGTGGGATGCTTTAGAATATAAAAAGGAAGTACCTTTTAATAAAGTT TTGGTTGACAATTATAAATTAACTTTTGATAGTACAAAAATACAAGAGAGAGTTATATTAAATAAAGTACAAGAAAAAGA ACTTCTTAATTTGATGGTTTGTGATACTTGTGTTCCTGAGCAAATATCCGCTGCATGTTACAAACCAAGACATATGATTT TGTTTCGAGATAAGAAAAACAGAATTATTGGTTACGATGAATTTTGCATCGAATGTGTTGGTTCAAGAAGTTCTGATAAC TTAAACGGATTCCAAAAATATTGTTATTCGGATATGCAAAAACTATTAGAGAACTTTGGAATAACCCTTTTTATTGAAAG TGGTGATGAAAAAAGAGTAAAGGAAGAAATTGATTTTATAGAAAATATTCGAAAATCTAAATAG
Upstream 100 bases:
>100_bases CTACATGGGTAAAAATACGCCAGATAGACAAGAGTTTATTATTAAGAACCTGAAGGTTGAGATTGATGAATTAGAAGAAG CTTAATTGAACTGGTTTTGT
Downstream 100 bases:
>100_bases AAAAATAGAAAATACTGAAATAATTCAGCATAAAAATGAAAGACGAAGAAGACGATAACATAATTCCAAACGACGACGAG AATAATCAAGATGAAAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKKIFCLFIIVFSVIACYDKKSKNLSIEDEGTPIVKSVSRTIYKREFPIKDFSKIEVVSYYDRIMWDALEYKKEVPFNKV LVDNYKLTFDSTKIQERVILNKVQEKELLNLMVCDTCVPEQISAACYKPRHMILFRDKKNRIIGYDEFCIECVGSRSSDN LNGFQKYCYSDMQKLLENFGITLFIESGDEKRVKEEIDFIENIRKSK
Sequences:
>Translated_207_residues MKKIFCLFIIVFSVIACYDKKSKNLSIEDEGTPIVKSVSRTIYKREFPIKDFSKIEVVSYYDRIMWDALEYKKEVPFNKV LVDNYKLTFDSTKIQERVILNKVQEKELLNLMVCDTCVPEQISAACYKPRHMILFRDKKNRIIGYDEFCIECVGSRSSDN LNGFQKYCYSDMQKLLENFGITLFIESGDEKRVKEEIDFIENIRKSK >Mature_207_residues MKKIFCLFIIVFSVIACYDKKSKNLSIEDEGTPIVKSVSRTIYKREFPIKDFSKIEVVSYYDRIMWDALEYKKEVPFNKV LVDNYKLTFDSTKIQERVILNKVQEKELLNLMVCDTCVPEQISAACYKPRHMILFRDKKNRIIGYDEFCIECVGSRSSDN LNGFQKYCYSDMQKLLENFGITLFIESGDEKRVKEEIDFIENIRKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24437; Mature: 24437
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFCLFIIVFSVIACYDKKSKNLSIEDEGTPIVKSVSRTIYKREFPIKDFSKIEVVSY CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH YDRIMWDALEYKKEVPFNKVLVDNYKLTFDSTKIQERVILNKVQEKELLNLMVCDTCVPE HHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QISAACYKPRHMILFRDKKNRIIGYDEFCIECVGSRSSDNLNGFQKYCYSDMQKLLENFG HHHHHHCCCCEEEEEECCCCCEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ITLFIESGDEKRVKEEIDFIENIRKSK EEEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIFCLFIIVFSVIACYDKKSKNLSIEDEGTPIVKSVSRTIYKREFPIKDFSKIEVVSY CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH YDRIMWDALEYKKEVPFNKVLVDNYKLTFDSTKIQERVILNKVQEKELLNLMVCDTCVPE HHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QISAACYKPRHMILFRDKKNRIIGYDEFCIECVGSRSSDNLNGFQKYCYSDMQKLLENFG HHHHHHCCCCEEEEEECCCCCEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ITLFIESGDEKRVKEEIDFIENIRKSK EEEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA