| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is bglA [H]
Identifier: 146300190
GI number: 146300190
Start: 2920398
End: 2921156
Strand: Direct
Name: bglA [H]
Synonym: Fjoh_2435
Alternate gene names: 146300190
Gene position: 2920398-2921156 (Clockwise)
Preceding gene: 146300189
Following gene: 146300191
Centisome position: 47.9
GC content: 33.47
Gene sequence:
>759_bases ATGAATAAAATAGTTTTACTGCTGTTAATCTGTAGTTTTTCGTATGCACAGGAAACAAAAAGAAAATTAGTCTGGGAAGA AAATTTCAGTAAAAAAAATATAAACGAAAAAGACTGGAATTTTGAACTTGGCGACGGCTGTCCAGATTTATGTGGTTACG GAAATAATGAAAGACAGATTTATACCAAAACAAATCACGAAATAAAAGATGGAAATTTAATTATTGAAGCCAGGAAAGAA GGAAATATATATACTTCGACCAAAATTACTACAAAAGGCAAAAAGGAGTTTAAATACGGCAGAATTGAAGCAAGGGCAAA ACTGCCAATCGGACACGGTTTATGGCCGGCATTTTGGATGCTTGGAGCTAATATTGATGAGGTAAAATGGCCAAAAACAG GTGAAATTGATATCTTAGAATATATAGGCAGAGATCCTCATATGGTTTATACAACCCTGCATACGCAAGACAGCCACGGA AATACAATCAATACAAAACGTACAGAATTTCCAAATATTGAAGAAGGTTATCATGTATATGCCATTGAGTGGAACAAGGA CAAAATTGATTTTTTTGTTGATACAACTTTAGTTTACACCTTCAATCCAGAAGTAAAAAATGAAGATACATGGCCTTTTG ATAAACCATTTTATATCATTGTAAATTTGGCAATTGGAGGCAATTTTGGAGGTCCGGAAGTAGATGATTCTGTGTTACCG CAAAAATATTACGTAGATTATGTACGAGTTTACCAATAA
Upstream 100 bases:
>100_bases TGGAGGTTGATTATGTTAGAGTATATCAATAAGTTGAGTTAATTAATTAGTAATTCTGAGAAGGTCAGTTTCGGCTGGCC TTCTTAATTAAAAAAAGAAT
Downstream 100 bases:
>100_bases AAAATAATACCTTAAAATTTCAGTAATAAAGCAGGTGTAAGTAGTTTAAGTGATTAATTGTAAGTTATTTACATCTGTTT TTTAAATATTGCAAATAGTT
Product: glucan endo-1,3-beta-D-glucosidase
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNKIVLLLLICSFSYAQETKRKLVWEENFSKKNINEKDWNFELGDGCPDLCGYGNNERQIYTKTNHEIKDGNLIIEARKE GNIYTSTKITTKGKKEFKYGRIEARAKLPIGHGLWPAFWMLGANIDEVKWPKTGEIDILEYIGRDPHMVYTTLHTQDSHG NTINTKRTEFPNIEEGYHVYAIEWNKDKIDFFVDTTLVYTFNPEVKNEDTWPFDKPFYIIVNLAIGGNFGGPEVDDSVLP QKYYVDYVRVYQ
Sequences:
>Translated_252_residues MNKIVLLLLICSFSYAQETKRKLVWEENFSKKNINEKDWNFELGDGCPDLCGYGNNERQIYTKTNHEIKDGNLIIEARKE GNIYTSTKITTKGKKEFKYGRIEARAKLPIGHGLWPAFWMLGANIDEVKWPKTGEIDILEYIGRDPHMVYTTLHTQDSHG NTINTKRTEFPNIEEGYHVYAIEWNKDKIDFFVDTTLVYTFNPEVKNEDTWPFDKPFYIIVNLAIGGNFGGPEVDDSVLP QKYYVDYVRVYQ >Mature_252_residues MNKIVLLLLICSFSYAQETKRKLVWEENFSKKNINEKDWNFELGDGCPDLCGYGNNERQIYTKTNHEIKDGNLIIEARKE GNIYTSTKITTKGKKEFKYGRIEARAKLPIGHGLWPAFWMLGANIDEVKWPKTGEIDILEYIGRDPHMVYTTLHTQDSHG NTINTKRTEFPNIEEGYHVYAIEWNKDKIDFFVDTTLVYTFNPEVKNEDTWPFDKPFYIIVNLAIGGNFGGPEVDDSVLP QKYYVDYVRVYQ
Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 29372; Mature: 29372
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS01034 GLYCOSYL_HYDROL_F16
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIVLLLLICSFSYAQETKRKLVWEENFSKKNINEKDWNFELGDGCPDLCGYGNNERQI CCCEEEEEEHHCCHHHHHHHHHEEECCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCCEE YTKTNHEIKDGNLIIEARKEGNIYTSTKITTKGKKEFKYGRIEARAKLPIGHGLWPAFWM EECCCCEEECCCEEEEEECCCCEEEEEEEEECCCCCCEECEEEEEEECCCCCCHHHHHHH LGANIDEVKWPKTGEIDILEYIGRDPHMVYTTLHTQDSHGNTINTKRTEFPNIEEGYHVY HCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCEEEE AIEWNKDKIDFFVDTTLVYTFNPEVKNEDTWPFDKPFYIIVNLAIGGNFGGPEVDDSVLP EEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC QKYYVDYVRVYQ HHHHEEEEEEEC >Mature Secondary Structure MNKIVLLLLICSFSYAQETKRKLVWEENFSKKNINEKDWNFELGDGCPDLCGYGNNERQI CCCEEEEEEHHCCHHHHHHHHHEEECCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCCEE YTKTNHEIKDGNLIIEARKEGNIYTSTKITTKGKKEFKYGRIEARAKLPIGHGLWPAFWM EECCCCEEECCCEEEEEECCCCEEEEEEEEECCCCCCEECEEEEEEECCCCCCHHHHHHH LGANIDEVKWPKTGEIDILEYIGRDPHMVYTTLHTQDSHGNTINTKRTEFPNIEEGYHVY HCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCEEEE AIEWNKDKIDFFVDTTLVYTFNPEVKNEDTWPFDKPFYIIVNLAIGGNFGGPEVDDSVLP EEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC QKYYVDYVRVYQ HHHHEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7925416 [H]