Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is bglA [H]

Identifier: 146300189

GI number: 146300189

Start: 2918659

End: 2920329

Strand: Direct

Name: bglA [H]

Synonym: Fjoh_2434

Alternate gene names: 146300189

Gene position: 2918659-2920329 (Clockwise)

Preceding gene: 146300188

Following gene: 146300190

Centisome position: 47.87

GC content: 38.78

Gene sequence:

>1671_bases
ATGAGCAAGAAATTAATTATAAAGATAGTATCCCTATTTACGATTCTCTTGATGACGGGTTGTCAGAAAGACGATTTTAC
ATTCGGATCAATAACTACACCATCTAATTTAAAGGTAACAGCCGAAATTGTTGGTAAAACAGCTGATGCTCCTTATGGAG
ACGGATCTGGAATAGTAAAGTTTGCTGCAACAGCAGATAATGCTATTTCGTATAAATATGTTTATCCAGACGGGACTTCT
GATAATGCTCCAAGCGGAAAAATCTCTAAAAGATTTACCAAAACAGGAGTTAACACCTATACCGTAACTATTGTTGCAAC
AGGAGCAGGAGGAGTAGCAACAAATACAACAATCGATGTTGAAGTAAAAAGTGATTTTAGCGACGATCAGGCCGTTCAAT
TGCTTACAGGCGGATCTTCTAAAAAATGGTATTGGGCTGCCGGAGAACCAGGACATCTTGGTGTAGGTCAGAACGATGGC
GATGCAGAGAAAAACTTCTTCCCTAATTACTACAGTGCAGGAGCATTTGAAAAAGCAAATTCACCAAACAGCAGCTGTTT
ATACGATAACGTATTGACATTCTCTCTTGATGGGGATCAGCTTAAATTCCAATTAGATAACGGCGGAGCAACATTCTTCA
ATAAAGATTTTGGAAGCGTTGCAGGAGCATCTGGTTTATCAGAAGACATGTGTTTAAGCTATAACACTGGTGCTGCAAAA
ACAGTTTCATTAAGTCCTTCTGAATCTGTAATAATGAATAATCCAAAACATGCAGAGCAGACAAGAGGTACAACAATGAA
CTTCTCTGACAATGGATTTATGGGGTACTATATTGGTCAAAATTCTTATGAGATTTTATCACTTACTGCTAACCGTATGG
TTGTAAGAGCAGTAATGGGCGGAAATCCGGCATTGGCATGGTACCATACCTTTACAACTACGCCTCCAAATCAAAATCCA
AATCCATCAACGGATTATACAAACCTTGTATGGCAGGACGAATTTAATACAGACGGAGCGCCAGATCCTGCAAAATGGGT
TTATGATTTAGGAAGAGGCGATAACGGCTGGGGAAATAATGAAAAACAAAATTATACCAGTTCAGCTTCAAACATAAAAG
TACAAGGCGGAAGCTTAATTATTACAGCTAAAAAAGAAGCTTCCGGCGGAGCAGATTATTCTTCGGCAAGACTTAAATCA
GATGGAAAATATTCTTTTACATATGGTAAAGTTGAGGTTAGAGCAAAACTTCCTTCTGGCGGCGGAACCTGGCCGGCTAT
CTGGATGCTTGGGCAGAATTATGCAACAAAACCATGGCCTGCCTGCGGAGAAATTGATATTATGGAACACGTAGGAAACA
ATCAGAACGTGATTCACGGTACATTTCATTATCCGGCACGTTTTGGCGGAAACGCAGATACAGCATCGAAAACAATTCCA
AATGTATCTACAGAGTTTCATGTTTATAAAACAATCTGGAGTCCGGAATCTATCTCAATTTATGTTGATGATACACTGAT
TCATACACTGGCAAATACTGCATCATTACCTTTTAACAGCAGCTTTTTCTTGATTTTAAATGTTGCAATGGGAGGTAATT
TAGGAGGAGCTATTGATGGTGCTTTTTCACAATCTTCTATGGAGGTTGATTATGTTAGAGTATATCAATAA

Upstream 100 bases:

>100_bases
AATACGACAGAGTAATTCTATTCCCTGATTTTGGTAAAAACGGACTAGGAGAAACGTATTACTTTGATGATATAAAACAA
TCCAATTAAAACAAGAAATC

Downstream 100 bases:

>100_bases
GTTGAGTTAATTAATTAGTAATTCTGAGAAGGTCAGTTTCGGCTGGCCTTCTTAATTAAAAAAAGAATATGAATAAAATA
GTTTTACTGCTGTTAATCTG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MSKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVKFAATADNAISYKYVYPDGTS
DNAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDVEVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDG
DAEKNFFPNYYSAGAFEKANSPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAK
TVSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMGGNPALAWYHTFTTTPPNQNP
NPSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNNEKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKS
DGKYSFTYGKVEVRAKLPSGGGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIP
NVSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDGAFSQSSMEVDYVRVYQ

Sequences:

>Translated_556_residues
MSKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVKFAATADNAISYKYVYPDGTS
DNAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDVEVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDG
DAEKNFFPNYYSAGAFEKANSPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAK
TVSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMGGNPALAWYHTFTTTPPNQNP
NPSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNNEKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKS
DGKYSFTYGKVEVRAKLPSGGGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIP
NVSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDGAFSQSSMEVDYVRVYQ
>Mature_555_residues
SKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVKFAATADNAISYKYVYPDGTSD
NAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDVEVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDGD
AEKNFFPNYYSAGAFEKANSPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAKT
VSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMGGNPALAWYHTFTTTPPNQNPN
PSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNNEKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKSD
GKYSFTYGKVEVRAKLPSGGGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIPN
VSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDGAFSQSSMEVDYVRVYQ

Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: =3.2.1.73 [H]

Molecular weight: Translated: 59727; Mature: 59595

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVK
CCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEE
FAATADNAISYKYVYPDGTSDNAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDV
EEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEE
EVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDGDAEKNFFPNYYSAGAFEKAN
EECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAK
CCCCCEEECCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEE
TVSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMG
EEEECCCCCEEECCCCHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEECCEEEEEEEEC
GNPALAWYHTFTTTPPNQNPNPSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNN
CCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEECCCCCCCCCCC
EKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKSDGKYSFTYGKVEVRAKLPSG
CCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCEEEEEEEEEEEEECCCC
GGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIP
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHCCC
NVSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDG
CCCCEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCC
AFSQSSMEVDYVRVYQ
CCCCCCCEEEEEEEEC
>Mature Secondary Structure 
SKKLIIKIVSLFTILLMTGCQKDDFTFGSITTPSNLKVTAEIVGKTADAPYGDGSGIVK
CCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEE
FAATADNAISYKYVYPDGTSDNAPSGKISKRFTKTGVNTYTVTIVATGAGGVATNTTIDV
EEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEE
EVKSDFSDDQAVQLLTGGSSKKWYWAAGEPGHLGVGQNDGDAEKNFFPNYYSAGAFEKAN
EECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPNSSCLYDNVLTFSLDGDQLKFQLDNGGATFFNKDFGSVAGASGLSEDMCLSYNTGAAK
CCCCCEEECCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEE
TVSLSPSESVIMNNPKHAEQTRGTTMNFSDNGFMGYYIGQNSYEILSLTANRMVVRAVMG
EEEECCCCCEEECCCCHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEECCEEEEEEEEC
GNPALAWYHTFTTTPPNQNPNPSTDYTNLVWQDEFNTDGAPDPAKWVYDLGRGDNGWGNN
CCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHEECCCCCCCCCCC
EKQNYTSSASNIKVQGGSLIITAKKEASGGADYSSARLKSDGKYSFTYGKVEVRAKLPSG
CCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCEEEEEEEEEEEEECCCC
GGTWPAIWMLGQNYATKPWPACGEIDIMEHVGNNQNVIHGTFHYPARFGGNADTASKTIP
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHCCC
NVSTEFHVYKTIWSPESISIYVDDTLIHTLANTASLPFNSSFFLILNVAMGGNLGGAIDG
CCCCEEEEEEEECCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCC
AFSQSSMEVDYVRVYQ
CCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7925416 [H]