| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300180
Identifier: 146300180
GI number: 146300180
Start: 2901206
End: 2902489
Strand: Direct
Name: 146300180
Synonym: Fjoh_2425
Alternate gene names: NA
Gene position: 2901206-2902489 (Clockwise)
Preceding gene: 146300179
Following gene: 146300181
Centisome position: 47.59
GC content: 32.63
Gene sequence:
>1284_bases TTGGAACAAAAAAAGCTTTTAATTATTACGTATTACTTTCCTCCAGCTGGCGGACCGGGAGTACAACGCTGGTTGAAATT TGTAAAATATCTGCCGGATTTTGGTGTTCAGCCTATTGTTTATGTTCCAGAAAATCCAACATATCCAATTGTTGATGAAG GTTTAGTAAGCGAAATATCAGATAAAGCAATTGTTCTAAAAAATAAAATTTGGGAGCCCTACCAGCTGGCTTCTGTGTTT TCAAAAAATAAGACTAAGAAAATCAGTTCCGGAATTTTTCCGCATAAAAAAAAGCAGACTTTTTTAGATAAAACTTTTCT TTGGGTGCGTGGTAATTTATTCATTCCGGATGCACGCGTTTTTTGGGTAAAACCTTCTGTTGCTTACCTTGAGAAATATA TCAAAGAAAACAATATTGATACTATTGTAACTTCTGGACCGCCGCATAGTCTGCATTTGATAGGTTTAGAATTAAAAGAA AAACTAAATGTAAAATGGTTTGCCGATTTCCGCGATCCGTGGACAACTATTGGCTATCATAAAGCACTTCGTTTATCTGG CTATGCAGCTAAAAAACATAAAAATTTAGAACACAAAGTTCTGAATTCTGCTGATACTATTATTGTAACGAGTAAAACAA CAAAAACAGAATTTGAAGCGATTACTAATAAGCCGATTTCTGTAATTACAAACGGATACGATATTGAAAAGGTTGAAAAA CAGCCTTTAGACGAAAAATTCACTCTTGCGCATATTGGTTCATTTTTATCAGACCGAAATCCTAAATTCTTATGGGAATG TCTAGTTGAACTACTTCAGGAAATCCAAGATTTTAAATCTCATTTAGAAATTAAACTAATTGGAGCCGTAAGTCAGGAAA TTTTAGATTCTATAAACGAATTTAAATTAAATGACTATTTGAACCTTTTAGGATATGTTTCGCACAATGAAGCGATTGCA CATCAAAAAAAATCTCAGGTTCTGCTTTTAATCGAAATTAATTCAGAAGATACCAAAAGCATTATTCCGGGTAAATTGTT TGAATATATGGTCTCAAACCGCCCAATAATTGCGATTGGACCAAATGGTTCTGATTTTGCCGATATTATAAAAGAAACAA ATACAGGAGTATTTTTTGATTATTCAGAAAAAGCGAAGTTAAAAAGTGTAATTTTGGACTTTTATAATCAATTTTTGGAA GGAAAGTTACAAGCTAATGGTGTTGGTTTACAGCAGTATTCACGAAAAAACCTGACAAAGCAATTAGTACAATTGATAAA TTAA
Upstream 100 bases:
>100_bases TGTGCTTTTAATTGGAGGAATATATTTTGAAAGAAAGAAGTTTAGCGAACAAGCTAAGTAATTAGCATCAGTTTGCACTT TAAATAATAATCGATTTTCA
Downstream 100 bases:
>100_bases AACAACAATTTCAAAAATAAAAAGAGAGCAGAAAATCAAAAATCTTAACTCTACAATCTAAACTCTGCAATCAAAAAATG GGTATTGTCTTAAACCAGTC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MEQKKLLIITYYFPPAGGPGVQRWLKFVKYLPDFGVQPIVYVPENPTYPIVDEGLVSEISDKAIVLKNKIWEPYQLASVF SKNKTKKISSGIFPHKKKQTFLDKTFLWVRGNLFIPDARVFWVKPSVAYLEKYIKENNIDTIVTSGPPHSLHLIGLELKE KLNVKWFADFRDPWTTIGYHKALRLSGYAAKKHKNLEHKVLNSADTIIVTSKTTKTEFEAITNKPISVITNGYDIEKVEK QPLDEKFTLAHIGSFLSDRNPKFLWECLVELLQEIQDFKSHLEIKLIGAVSQEILDSINEFKLNDYLNLLGYVSHNEAIA HQKKSQVLLLIEINSEDTKSIIPGKLFEYMVSNRPIIAIGPNGSDFADIIKETNTGVFFDYSEKAKLKSVILDFYNQFLE GKLQANGVGLQQYSRKNLTKQLVQLIN
Sequences:
>Translated_427_residues MEQKKLLIITYYFPPAGGPGVQRWLKFVKYLPDFGVQPIVYVPENPTYPIVDEGLVSEISDKAIVLKNKIWEPYQLASVF SKNKTKKISSGIFPHKKKQTFLDKTFLWVRGNLFIPDARVFWVKPSVAYLEKYIKENNIDTIVTSGPPHSLHLIGLELKE KLNVKWFADFRDPWTTIGYHKALRLSGYAAKKHKNLEHKVLNSADTIIVTSKTTKTEFEAITNKPISVITNGYDIEKVEK QPLDEKFTLAHIGSFLSDRNPKFLWECLVELLQEIQDFKSHLEIKLIGAVSQEILDSINEFKLNDYLNLLGYVSHNEAIA HQKKSQVLLLIEINSEDTKSIIPGKLFEYMVSNRPIIAIGPNGSDFADIIKETNTGVFFDYSEKAKLKSVILDFYNQFLE GKLQANGVGLQQYSRKNLTKQLVQLIN >Mature_427_residues MEQKKLLIITYYFPPAGGPGVQRWLKFVKYLPDFGVQPIVYVPENPTYPIVDEGLVSEISDKAIVLKNKIWEPYQLASVF SKNKTKKISSGIFPHKKKQTFLDKTFLWVRGNLFIPDARVFWVKPSVAYLEKYIKENNIDTIVTSGPPHSLHLIGLELKE KLNVKWFADFRDPWTTIGYHKALRLSGYAAKKHKNLEHKVLNSADTIIVTSKTTKTEFEAITNKPISVITNGYDIEKVEK QPLDEKFTLAHIGSFLSDRNPKFLWECLVELLQEIQDFKSHLEIKLIGAVSQEILDSINEFKLNDYLNLLGYVSHNEAIA HQKKSQVLLLIEINSEDTKSIIPGKLFEYMVSNRPIIAIGPNGSDFADIIKETNTGVFFDYSEKAKLKSVILDFYNQFLE GKLQANGVGLQQYSRKNLTKQLVQLIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48839; Mature: 48839
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQKKLLIITYYFPPAGGPGVQRWLKFVKYLPDFGVQPIVYVPENPTYPIVDEGLVSEIS CCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHC DKAIVLKNKIWEPYQLASVFSKNKTKKISSGIFPHKKKQTFLDKTFLWVRGNLFIPDARV CCEEEEHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHEEEEEECCEEECCCEE FWVKPSVAYLEKYIKENNIDTIVTSGPPHSLHLIGLELKEKLNVKWFADFRDPWTTIGYH EEECCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEHHHHCCEEEEEECCCCCHHHHHH KALRLSGYAAKKHKNLEHKVLNSADTIIVTSKTTKTEFEAITNKPISVITNGYDIEKVEK HHHEECCHHHHHHCCCHHHHCCCCCEEEEECCCCCHHHHHHCCCCEEEEECCCCHHHHHC QPLDEKFTLAHIGSFLSDRNPKFLWECLVELLQEIQDFKSHLEIKLIGAVSQEILDSINE CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH FKLNDYLNLLGYVSHNEAIAHQKKSQVLLLIEINSEDTKSIIPGKLFEYMVSNRPIIAIG HHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEC PNGSDFADIIKETNTGVFFDYSEKAKLKSVILDFYNQFLEGKLQANGVGLQQYSRKNLTK CCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHH QLVQLIN HHHHHHC >Mature Secondary Structure MEQKKLLIITYYFPPAGGPGVQRWLKFVKYLPDFGVQPIVYVPENPTYPIVDEGLVSEIS CCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHC DKAIVLKNKIWEPYQLASVFSKNKTKKISSGIFPHKKKQTFLDKTFLWVRGNLFIPDARV CCEEEEHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHEEEEEECCEEECCCEE FWVKPSVAYLEKYIKENNIDTIVTSGPPHSLHLIGLELKEKLNVKWFADFRDPWTTIGYH EEECCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEHHHHCCEEEEEECCCCCHHHHHH KALRLSGYAAKKHKNLEHKVLNSADTIIVTSKTTKTEFEAITNKPISVITNGYDIEKVEK HHHEECCHHHHHHCCCHHHHCCCCCEEEEECCCCCHHHHHHCCCCEEEEECCCCHHHHHC QPLDEKFTLAHIGSFLSDRNPKFLWECLVELLQEIQDFKSHLEIKLIGAVSQEILDSINE CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH FKLNDYLNLLGYVSHNEAIAHQKKSQVLLLIEINSEDTKSIIPGKLFEYMVSNRPIIAIG HHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEC PNGSDFADIIKETNTGVFFDYSEKAKLKSVILDFYNQFLEGKLQANGVGLQQYSRKNLTK CCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHH QLVQLIN HHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA