| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300179
Identifier: 146300179
GI number: 146300179
Start: 2898728
End: 2901166
Strand: Direct
Name: 146300179
Synonym: Fjoh_2424
Alternate gene names: NA
Gene position: 2898728-2901166 (Clockwise)
Preceding gene: 146300178
Following gene: 146300180
Centisome position: 47.54
GC content: 34.36
Gene sequence:
>2439_bases TTGAAAATAGTAAATAAATTCTATCCGCATGCCCTTGTAGTACTGGGCTTTATTCTCGTTTCATTAATTTATTTTTATCC GGTTCTGCAGGGAAAACAAATCTTCCAGTCAGATATAGCTCAATACACCGGAATGGCCAAAGAGCAAAATGATTTTAGAG CAGCAGAACACGCTGAACCATACTGGACAAACTCTGCTTTTGGAGGAATGCCGACTTACCAGTTAGGGGCTAATTATCCA AACGATTTTGTGGGTAAAATAGATGATATGCTTCGTTTTCTGCCGCGTCCTGCAGATTATTTATTTCTATATTTCTTAGG TTTTTATGGTTTGTTATTGGTTTTAAAAACAGATCCGTTAAAAGCTTTTATTGGCGCTATTGCGTTTGGATTTTCTACTT ATTTAATTATTATTCTTGGAGTTGGGCACAATGCTAAGGCACATGCTATTGCGTATATGCCATTGGTTATTGCCGGATTT ATACTCGTTTTTCAGAAAAAATACATTTGGGGAGGTCTGCTTACCATGTTTGCCGTTGCGTTAGAAGTTAACGCCAACCA CTTTCAAATGACCTATTATTTATTGATTTTCTTATTGATATTATCAGGTTATTTTACCTTCAATTTTATAAAAGATAAAG AATATAAACCGCTTTTAATTGCAATTGGAACTTTGGCTGTTGCCGGAATTTTTGCTATTGGTGCCAATGCAGCCAATTTA ATGGCAACTAGCGAGTATGCTAAATTTAGTACACGAAGCAATAGTGAATTGACTTTTAATCCAGATGGAACAAAAAAGAC AAATGAAAATGCTTTAAGCCGTGAGTATATTACTGAGTATAGTTACGGAATAGCTGAAAGTTTTAACCTTATTGCTCCAA GACTTTTTGGAGGTTCTAACCACGAAAATATAGGAACTGACAGCAGTATGTACTCTTTTATGATGGAGCAGGGAGTACCG GCAAGTCAGGCAGAAGATTTTGTATCAGGAATGCCGACATACTGGGGAGATCAGCCAATAGTTGCTGCACCTGCTTACAT TGGTATAGTTGTTTTTTTCCTGGCAGTATTGGCATTATTTATTGATGAAAGAAAAATAAAATACGTATTTCTTTCAGGAG CATTGTTTTCATTAGTGCTTTCTTGGGGAAAAAATTTCTCGCTTTTGACTGATTTCTTCATTGATTATGTGCCAATGTAT GATAAGTTTAGAGCAGTATCATCTATTCAGGTTATTTTAGAATTGTGTTTTCCAGTATTAGCAGTAATGGGAATTCAATC GTTTTTTAAAGCAAAAGAAGAGCCTAAATTACAGCAAAAAGCTCTTATACAAACAGGAGTTTTTGGTATAGGAGTTATTT TGATTTTAGTTTTTGCAAAAGGCTTTTTCCACTTTACAGGAAGCAATGATAATTATTTCCTTCAAAGTTATGGAGCAGCA TTTGTAGATGCATTAAAAGAAGACAGAAAATCTTTATACCTAGCTGATTTACTTCGTTCAGGATTTTTTATAGTCGTGAC TTTTGGAGCTTTATGGCTGTTTATTAAAAATAAGTTCTCGCAAACAACTACTTTGGTAATTGTAGCTCTTTTAATGATTT TTGATTTGTTTTTTGTTGACAAAAAATATGTTTCTGCGAAAGATTTTGTGAGCCCGGTTCAAATTGCGGCTCCGTTTCAG GAAACACCTGCTGATGCAAAAATTTTAGAAGATACAACACATTATAGAGTTTTTGAAGTAAACGGTAATATGTCAAGCGC AAGAGCTTCCTTTTTTCACCATTCTATTGGAGGTTATCATGCAGCAAAACCAAGAAGAATGCAGCAGTTATTCGATTATC AAATTGCTAAAAACAATCTGGAAGTACTTAATATGTTAAATGTTAAGTATGTGATTCAAACCGATAAAGAAGGAAAAGAA ATTCCAACAATCAATCCCGATGCAAATGGAAATGCATGGTTTGTAAGCTCAATTAAGCTGGTTAATAAAGCTGATGAAGT TATGAAAACTTTAGATCATCTTGATACTAAAAAGGTGGCTGTTTTCAATGTTCATGAGCATGAAGGCAAGTTTAGAAATG CCCGTATGAAAAAGCAATGGGATACAACCGGAACAATAAAACTAGTTCAATACAAACCAAACTACATTAAATACCAATCT GATAATGGAAAAGACGGATTGGCTGTTTTCTCTGAAATCTATTATAAAAACGGCTGGAACGCTTACATTGACGGACAATT AACGGATCATTTCCCTGTTGATTATGTTTTAAGAGCTATGGAAATTCCGGGTGGAAAACATACAATTGAATTTAAGTTTG AGCCAAATGTTATTAAAACAGGAGGTACAATTAACCTGGTTAGTTCTATTGGAATGTTTGTGCTTTTAATTGGAGGAATA TATTTTGAAAGAAAGAAGTTTAGCGAACAAGCTAAGTAA
Upstream 100 bases:
>100_bases CGAGACCAAAAAAGTGGGGGATTATGTTGATTACGAAGAAATAGATTAAGTTTGCATCCTGACAAATAAGGATTCATCAT TTAACCAAACCAGCCCAAAA
Downstream 100 bases:
>100_bases TTAGCATCAGTTTGCACTTTAAATAATAATCGATTTTCATTGGAACAAAAAAAGCTTTTAATTATTACGTATTACTTTCC TCCAGCTGGCGGACCGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 812; Mature: 812
Protein sequence:
>812_residues MKIVNKFYPHALVVLGFILVSLIYFYPVLQGKQIFQSDIAQYTGMAKEQNDFRAAEHAEPYWTNSAFGGMPTYQLGANYP NDFVGKIDDMLRFLPRPADYLFLYFLGFYGLLLVLKTDPLKAFIGAIAFGFSTYLIIILGVGHNAKAHAIAYMPLVIAGF ILVFQKKYIWGGLLTMFAVALEVNANHFQMTYYLLIFLLILSGYFTFNFIKDKEYKPLLIAIGTLAVAGIFAIGANAANL MATSEYAKFSTRSNSELTFNPDGTKKTNENALSREYITEYSYGIAESFNLIAPRLFGGSNHENIGTDSSMYSFMMEQGVP ASQAEDFVSGMPTYWGDQPIVAAPAYIGIVVFFLAVLALFIDERKIKYVFLSGALFSLVLSWGKNFSLLTDFFIDYVPMY DKFRAVSSIQVILELCFPVLAVMGIQSFFKAKEEPKLQQKALIQTGVFGIGVILILVFAKGFFHFTGSNDNYFLQSYGAA FVDALKEDRKSLYLADLLRSGFFIVVTFGALWLFIKNKFSQTTTLVIVALLMIFDLFFVDKKYVSAKDFVSPVQIAAPFQ ETPADAKILEDTTHYRVFEVNGNMSSARASFFHHSIGGYHAAKPRRMQQLFDYQIAKNNLEVLNMLNVKYVIQTDKEGKE IPTINPDANGNAWFVSSIKLVNKADEVMKTLDHLDTKKVAVFNVHEHEGKFRNARMKKQWDTTGTIKLVQYKPNYIKYQS DNGKDGLAVFSEIYYKNGWNAYIDGQLTDHFPVDYVLRAMEIPGGKHTIEFKFEPNVIKTGGTINLVSSIGMFVLLIGGI YFERKKFSEQAK
Sequences:
>Translated_812_residues MKIVNKFYPHALVVLGFILVSLIYFYPVLQGKQIFQSDIAQYTGMAKEQNDFRAAEHAEPYWTNSAFGGMPTYQLGANYP NDFVGKIDDMLRFLPRPADYLFLYFLGFYGLLLVLKTDPLKAFIGAIAFGFSTYLIIILGVGHNAKAHAIAYMPLVIAGF ILVFQKKYIWGGLLTMFAVALEVNANHFQMTYYLLIFLLILSGYFTFNFIKDKEYKPLLIAIGTLAVAGIFAIGANAANL MATSEYAKFSTRSNSELTFNPDGTKKTNENALSREYITEYSYGIAESFNLIAPRLFGGSNHENIGTDSSMYSFMMEQGVP ASQAEDFVSGMPTYWGDQPIVAAPAYIGIVVFFLAVLALFIDERKIKYVFLSGALFSLVLSWGKNFSLLTDFFIDYVPMY DKFRAVSSIQVILELCFPVLAVMGIQSFFKAKEEPKLQQKALIQTGVFGIGVILILVFAKGFFHFTGSNDNYFLQSYGAA FVDALKEDRKSLYLADLLRSGFFIVVTFGALWLFIKNKFSQTTTLVIVALLMIFDLFFVDKKYVSAKDFVSPVQIAAPFQ ETPADAKILEDTTHYRVFEVNGNMSSARASFFHHSIGGYHAAKPRRMQQLFDYQIAKNNLEVLNMLNVKYVIQTDKEGKE IPTINPDANGNAWFVSSIKLVNKADEVMKTLDHLDTKKVAVFNVHEHEGKFRNARMKKQWDTTGTIKLVQYKPNYIKYQS DNGKDGLAVFSEIYYKNGWNAYIDGQLTDHFPVDYVLRAMEIPGGKHTIEFKFEPNVIKTGGTINLVSSIGMFVLLIGGI YFERKKFSEQAK >Mature_812_residues MKIVNKFYPHALVVLGFILVSLIYFYPVLQGKQIFQSDIAQYTGMAKEQNDFRAAEHAEPYWTNSAFGGMPTYQLGANYP NDFVGKIDDMLRFLPRPADYLFLYFLGFYGLLLVLKTDPLKAFIGAIAFGFSTYLIIILGVGHNAKAHAIAYMPLVIAGF ILVFQKKYIWGGLLTMFAVALEVNANHFQMTYYLLIFLLILSGYFTFNFIKDKEYKPLLIAIGTLAVAGIFAIGANAANL MATSEYAKFSTRSNSELTFNPDGTKKTNENALSREYITEYSYGIAESFNLIAPRLFGGSNHENIGTDSSMYSFMMEQGVP ASQAEDFVSGMPTYWGDQPIVAAPAYIGIVVFFLAVLALFIDERKIKYVFLSGALFSLVLSWGKNFSLLTDFFIDYVPMY DKFRAVSSIQVILELCFPVLAVMGIQSFFKAKEEPKLQQKALIQTGVFGIGVILILVFAKGFFHFTGSNDNYFLQSYGAA FVDALKEDRKSLYLADLLRSGFFIVVTFGALWLFIKNKFSQTTTLVIVALLMIFDLFFVDKKYVSAKDFVSPVQIAAPFQ ETPADAKILEDTTHYRVFEVNGNMSSARASFFHHSIGGYHAAKPRRMQQLFDYQIAKNNLEVLNMLNVKYVIQTDKEGKE IPTINPDANGNAWFVSSIKLVNKADEVMKTLDHLDTKKVAVFNVHEHEGKFRNARMKKQWDTTGTIKLVQYKPNYIKYQS DNGKDGLAVFSEIYYKNGWNAYIDGQLTDHFPVDYVLRAMEIPGGKHTIEFKFEPNVIKTGGTINLVSSIGMFVLLIGGI YFERKKFSEQAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91545; Mature: 91545
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVNKFYPHALVVLGFILVSLIYFYPVLQGKQIFQSDIAQYTGMAKEQNDFRAAEHAEP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCC YWTNSAFGGMPTYQLGANYPNDFVGKIDDMLRFLPRPADYLFLYFLGFYGLLLVLKTDPL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHH KAFIGAIAFGFSTYLIIILGVGHNAKAHAIAYMPLVIAGFILVFQKKYIWGGLLTMFAVA HHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEVNANHFQMTYYLLIFLLILSGYFTFNFIKDKEYKPLLIAIGTLAVAGIFAIGANAANL HEECCCHHHHHHHHHHHHHHHHCHHEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCHHHH MATSEYAKFSTRSNSELTFNPDGTKKTNENALSREYITEYSYGIAESFNLIAPRLFGGSN HHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC HENIGTDSSMYSFMMEQGVPASQAEDFVSGMPTYWGDQPIVAAPAYIGIVVFFLAVLALF CCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHH IDERKIKYVFLSGALFSLVLSWGKNFSLLTDFFIDYVPMYDKFRAVSSIQVILELCFPVL HCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH AVMGIQSFFKAKEEPKLQQKALIQTGVFGIGVILILVFAKGFFHFTGSNDNYFLQSYGAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHH FVDALKEDRKSLYLADLLRSGFFIVVTFGALWLFIKNKFSQTTTLVIVALLMIFDLFFVD HHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH KKYVSAKDFVSPVQIAAPFQETPADAKILEDTTHYRVFEVNGNMSSARASFFHHSIGGYH HHHCCHHHCCCCHHEECCCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCC AAKPRRMQQLFDYQIAKNNLEVLNMLNVKYVIQTDKEGKEIPTINPDANGNAWFVSSIKL CCCHHHHHHHHHHHHHCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHH VNKADEVMKTLDHLDTKKVAVFNVHEHEGKFRNARMKKQWDTTGTIKLVQYKPNYIKYQS HHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHCCCHHHCCCCCCCEEEEEECCCEEEEEC DNGKDGLAVFSEIYYKNGWNAYIDGQLTDHFPVDYVLRAMEIPGGKHTIEFKFEPNVIKT CCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCEEEC GGTINLVSSIGMFVLLIGGIYFERKKFSEQAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIVNKFYPHALVVLGFILVSLIYFYPVLQGKQIFQSDIAQYTGMAKEQNDFRAAEHAEP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCC YWTNSAFGGMPTYQLGANYPNDFVGKIDDMLRFLPRPADYLFLYFLGFYGLLLVLKTDPL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHH KAFIGAIAFGFSTYLIIILGVGHNAKAHAIAYMPLVIAGFILVFQKKYIWGGLLTMFAVA HHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEVNANHFQMTYYLLIFLLILSGYFTFNFIKDKEYKPLLIAIGTLAVAGIFAIGANAANL HEECCCHHHHHHHHHHHHHHHHCHHEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCHHHH MATSEYAKFSTRSNSELTFNPDGTKKTNENALSREYITEYSYGIAESFNLIAPRLFGGSN HHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC HENIGTDSSMYSFMMEQGVPASQAEDFVSGMPTYWGDQPIVAAPAYIGIVVFFLAVLALF CCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHH IDERKIKYVFLSGALFSLVLSWGKNFSLLTDFFIDYVPMYDKFRAVSSIQVILELCFPVL HCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH AVMGIQSFFKAKEEPKLQQKALIQTGVFGIGVILILVFAKGFFHFTGSNDNYFLQSYGAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHH FVDALKEDRKSLYLADLLRSGFFIVVTFGALWLFIKNKFSQTTTLVIVALLMIFDLFFVD HHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH KKYVSAKDFVSPVQIAAPFQETPADAKILEDTTHYRVFEVNGNMSSARASFFHHSIGGYH HHHCCHHHCCCCHHEECCCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCC AAKPRRMQQLFDYQIAKNNLEVLNMLNVKYVIQTDKEGKEIPTINPDANGNAWFVSSIKL CCCHHHHHHHHHHHHHCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHH VNKADEVMKTLDHLDTKKVAVFNVHEHEGKFRNARMKKQWDTTGTIKLVQYKPNYIKYQS HHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHCCCHHHCCCCCCCEEEEEECCCEEEEEC DNGKDGLAVFSEIYYKNGWNAYIDGQLTDHFPVDYVLRAMEIPGGKHTIEFKFEPNVIKT CCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCEEEC GGTINLVSSIGMFVLLIGGIYFERKKFSEQAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA