| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is pqqL [C]
Identifier: 146300009
GI number: 146300009
Start: 2712737
End: 2715475
Strand: Direct
Name: pqqL [C]
Synonym: Fjoh_2253
Alternate gene names: 146300009
Gene position: 2712737-2715475 (Clockwise)
Preceding gene: 146300008
Following gene: 146300010
Centisome position: 44.49
GC content: 33.3
Gene sequence:
>2739_bases ATGAAAAACGTATTACTAGGTGGAATTTTATGCTGTACATTAATTTCATTGAGTCCTGTTTATGCCCAAAAAAAGGTCGA AGTGCCTAAATACATTACCAATATTGAAGGTGTAAAAGAATATTCTTTAAACAACGGATTAAAAATTCTTTTAATTCCAG ATGCTTCTCAGAGCAATATGATAGTTAATATCGTTTATAATGTAGGTTCCAGAAATGAAGGCTATGGTGAAAAAGGAATG GCGCATTTGCTGGAACACATGCTTTTTAAGAGTACTAAGAATTTAGGCGATATTAAAAAAATGTTGTCAGACAAAGGAGG AAATGCAAACGGAACCACCTGGTTAGACAGAACAAACTATTACGAGATTTTTCCATCAAGCGATGAAAACTTAAAATGGA GCATCGAAATGGAAGCCGACAGAATGATTCATGCTACCATTTTACAGTCAGACCTTGACAAAGAATTCTCTGTAGTTAGA AATGAGTTTGAAATAGGAGAAAATAATCCTGATGGAGTGTTGCAGGAAAGAATTCTTTCTGCAGCTTATTTGTGGCATAA TTACGGAAACAGTACCATAGGAAGTAAAGAAGATATTGAAAGAGTAAAAGCAAATACGCTGCGAGTTTTTTATGAAAAAT ACTATCAGCCGGATAACGCAACTCTTATAATTGCAGGAAAATTTGATGAAAAGAAAGCGCTGCAGTATGCAGGTCAGTAT TTTGGAGCAATCCCTCGACCAAAAAGAGTTTTAGATAAAACCTATACAATTGAGCCGGCTCAGGATGGAGAAAAATATGT TGAGCTTAAAAGAGCCGGAGACAGCAAAAATGTTGGAGCTTTGTACCACACAGCATCTTATGCAGATAAAGATTACGCAG CAATTGATGCGTTAGGCGAAATTTTAACAGCAGATCCATCAGGTTATTTGTATAAATCTTTAGTCGAAACACAAAAAATA TCCAGTATTTATTTTTGGCAGCCTACAGTAAGAGATGCCGGATTTATTTATTTTGGAGCTGCATTGCCGAATGATAAAGA TGTAAAAGAAACGAAAGAACTTATTAGAACTGAGCTGGATAAAATTGCATCAACAAAATATACAGATCAGGATATTAGCA GAGCAAAAGCTAAAATTATTAAGCAGATTGAGGCAGTAAAAAACAATACAATTTCGTATGCTGTAAACATGACAGAAATT GTTGGAGCCGGAGATTACAGACTTGGTTTTTTATATAGAGATGCAATTGAAAACCTTACAAAAGAAGATGTTCAAAGAGT AGCCGAGAAATATTTTAAAGCAAATAACAGAACAGTTGGTATTTTTATTCCGTCAAAAGATGAAGTAAGAGTAAAACCAA ACGAATATACTGATGAGCAATTATCAGCATTAATTAAAGATTACAAAGGAAAAGCACTTGAAAAAGAAGCTGCGCCGTTT GAAGCCTCTATTAAAAATTTAAAACAAAATTTTGCCGAAGGCAAATTAAGCAACGGCATTAAATACGGATTAATTAAAAA AGAAATCAAAGGCGGAAAAGTTCAGGCAAGTTTTAGATTTCCGGTGAGCAACGAAAAAGATTTAACAGATAAAAGCGATA TTGCCGGTATTCTTGCTCAGTTATTAAAAACAGGAACAAAAACACAATCTAAAGAGCAGATCCAGGATCGATTAGATCAA TTGAAATCTTCAATTAATTTTAATTTTTCGAGACAAACTTTAACTGTCAATATCAATACTTATAAAGAAAATTTTAAGGA AGTAATGGGAATTTTAGCAGACTTGCTGGCTAATTCAACTTTTCCTGAAAATGAACTTACCAAAACAATCAGTGAGTATA ATACTTATTTAGAGTCTAGTTTAAACGATCCGCAGGCTGTGGCATTTACTGAAATTACAAGGTCAACAACAAAATATCCA AAAGGAAATATGTTTTATACACCAACGATTCAGGAACAGATAGATGCTTTCAAAAAAATAAAACAATCAGAAATTGTTGA TTTTTATAAAAATGTTTTGGGCGGAAATAATGGTGTAGGAAGTGTAGTAGGAGATTTAGATGCTAAAACTACAGGAGAAA TTTTAGAAAGCACATTTGGAAAATGGAATTCTAAGGCGAAATATGAACTTGCTTTGCCAACTTATTTTGAAACACAAAAA TTAGACAAAGACATTATTACTCCAGACAAAGAAAATGCGGTTGCTTTAGGAAGAATCAGTTTTAAGATGGATAGAAACAG TGCTGATTATCCTGCATTTGTTATGGCAAATGAGATGTTAGGAAGCGGTGGTTTCTTAAGTGCCAGAATTCCGATGAGAT TAAGAGAAAAAGAAGGAATCAGCTATGGTGCAGGCTCTTTTGCAGATATTCCAATTACAAACAATGCGGCTTCATGGAGT TATTATGCTTTTTTAAATCCAACGAAAAAAGGCGCTGTTGAAACTGCAGCAAAAGAAGAAATTGCAAAAGCAATAAAAGA TGGATTTACAGCAGAAGAACTAAAATCTAATCTAACCAGCTGGCAAAACGAAAGAAAAACAAGATTAGGAGTTGACGGTA CATTAATGGAACTGTCAAATAATTATTTACAATACGGAGTGCCTTTAGAAGATTATGATACTTTGGAAACAAAAATCAAA GCTTTAAAAGTTGAAGATGTAAATAGTGTTTTGAAGAAATATCTTTCATTAGATAAAATGACTTCAGTGTATGCTGGAGA TTTTAATAAGAAAAACTAA
Upstream 100 bases:
>100_bases TTTTGTAATTCCTAAATCTTAGTTAATGTAGGTTTTTACTTTAGGAAAAATATTATATTTGGTTATCATTAACAAATTAA TAACCAATCCATCACAACCT
Downstream 100 bases:
>100_bases AGAAGGAAAATTTCAATGTAAAAAAAACGAAATGCATTTCACAATGTCATTTCGGTTTTTTTATGCTGTTATTAGGATTT GAATTTGGGATTTCAAAATT
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 912; Mature: 912
Protein sequence:
>912_residues MKNVLLGGILCCTLISLSPVYAQKKVEVPKYITNIEGVKEYSLNNGLKILLIPDASQSNMIVNIVYNVGSRNEGYGEKGM AHLLEHMLFKSTKNLGDIKKMLSDKGGNANGTTWLDRTNYYEIFPSSDENLKWSIEMEADRMIHATILQSDLDKEFSVVR NEFEIGENNPDGVLQERILSAAYLWHNYGNSTIGSKEDIERVKANTLRVFYEKYYQPDNATLIIAGKFDEKKALQYAGQY FGAIPRPKRVLDKTYTIEPAQDGEKYVELKRAGDSKNVGALYHTASYADKDYAAIDALGEILTADPSGYLYKSLVETQKI SSIYFWQPTVRDAGFIYFGAALPNDKDVKETKELIRTELDKIASTKYTDQDISRAKAKIIKQIEAVKNNTISYAVNMTEI VGAGDYRLGFLYRDAIENLTKEDVQRVAEKYFKANNRTVGIFIPSKDEVRVKPNEYTDEQLSALIKDYKGKALEKEAAPF EASIKNLKQNFAEGKLSNGIKYGLIKKEIKGGKVQASFRFPVSNEKDLTDKSDIAGILAQLLKTGTKTQSKEQIQDRLDQ LKSSINFNFSRQTLTVNINTYKENFKEVMGILADLLANSTFPENELTKTISEYNTYLESSLNDPQAVAFTEITRSTTKYP KGNMFYTPTIQEQIDAFKKIKQSEIVDFYKNVLGGNNGVGSVVGDLDAKTTGEILESTFGKWNSKAKYELALPTYFETQK LDKDIITPDKENAVALGRISFKMDRNSADYPAFVMANEMLGSGGFLSARIPMRLREKEGISYGAGSFADIPITNNAASWS YYAFLNPTKKGAVETAAKEEIAKAIKDGFTAEELKSNLTSWQNERKTRLGVDGTLMELSNNYLQYGVPLEDYDTLETKIK ALKVEDVNSVLKKYLSLDKMTSVYAGDFNKKN
Sequences:
>Translated_912_residues MKNVLLGGILCCTLISLSPVYAQKKVEVPKYITNIEGVKEYSLNNGLKILLIPDASQSNMIVNIVYNVGSRNEGYGEKGM AHLLEHMLFKSTKNLGDIKKMLSDKGGNANGTTWLDRTNYYEIFPSSDENLKWSIEMEADRMIHATILQSDLDKEFSVVR NEFEIGENNPDGVLQERILSAAYLWHNYGNSTIGSKEDIERVKANTLRVFYEKYYQPDNATLIIAGKFDEKKALQYAGQY FGAIPRPKRVLDKTYTIEPAQDGEKYVELKRAGDSKNVGALYHTASYADKDYAAIDALGEILTADPSGYLYKSLVETQKI SSIYFWQPTVRDAGFIYFGAALPNDKDVKETKELIRTELDKIASTKYTDQDISRAKAKIIKQIEAVKNNTISYAVNMTEI VGAGDYRLGFLYRDAIENLTKEDVQRVAEKYFKANNRTVGIFIPSKDEVRVKPNEYTDEQLSALIKDYKGKALEKEAAPF EASIKNLKQNFAEGKLSNGIKYGLIKKEIKGGKVQASFRFPVSNEKDLTDKSDIAGILAQLLKTGTKTQSKEQIQDRLDQ LKSSINFNFSRQTLTVNINTYKENFKEVMGILADLLANSTFPENELTKTISEYNTYLESSLNDPQAVAFTEITRSTTKYP KGNMFYTPTIQEQIDAFKKIKQSEIVDFYKNVLGGNNGVGSVVGDLDAKTTGEILESTFGKWNSKAKYELALPTYFETQK LDKDIITPDKENAVALGRISFKMDRNSADYPAFVMANEMLGSGGFLSARIPMRLREKEGISYGAGSFADIPITNNAASWS YYAFLNPTKKGAVETAAKEEIAKAIKDGFTAEELKSNLTSWQNERKTRLGVDGTLMELSNNYLQYGVPLEDYDTLETKIK ALKVEDVNSVLKKYLSLDKMTSVYAGDFNKKN >Mature_912_residues MKNVLLGGILCCTLISLSPVYAQKKVEVPKYITNIEGVKEYSLNNGLKILLIPDASQSNMIVNIVYNVGSRNEGYGEKGM AHLLEHMLFKSTKNLGDIKKMLSDKGGNANGTTWLDRTNYYEIFPSSDENLKWSIEMEADRMIHATILQSDLDKEFSVVR NEFEIGENNPDGVLQERILSAAYLWHNYGNSTIGSKEDIERVKANTLRVFYEKYYQPDNATLIIAGKFDEKKALQYAGQY FGAIPRPKRVLDKTYTIEPAQDGEKYVELKRAGDSKNVGALYHTASYADKDYAAIDALGEILTADPSGYLYKSLVETQKI SSIYFWQPTVRDAGFIYFGAALPNDKDVKETKELIRTELDKIASTKYTDQDISRAKAKIIKQIEAVKNNTISYAVNMTEI VGAGDYRLGFLYRDAIENLTKEDVQRVAEKYFKANNRTVGIFIPSKDEVRVKPNEYTDEQLSALIKDYKGKALEKEAAPF EASIKNLKQNFAEGKLSNGIKYGLIKKEIKGGKVQASFRFPVSNEKDLTDKSDIAGILAQLLKTGTKTQSKEQIQDRLDQ LKSSINFNFSRQTLTVNINTYKENFKEVMGILADLLANSTFPENELTKTISEYNTYLESSLNDPQAVAFTEITRSTTKYP KGNMFYTPTIQEQIDAFKKIKQSEIVDFYKNVLGGNNGVGSVVGDLDAKTTGEILESTFGKWNSKAKYELALPTYFETQK LDKDIITPDKENAVALGRISFKMDRNSADYPAFVMANEMLGSGGFLSARIPMRLREKEGISYGAGSFADIPITNNAASWS YYAFLNPTKKGAVETAAKEEIAKAIKDGFTAEELKSNLTSWQNERKTRLGVDGTLMELSNNYLQYGVPLEDYDTLETKIK ALKVEDVNSVLKKYLSLDKMTSVYAGDFNKKN
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=215, Percent_Identity=26.5116279069767, Blast_Score=73, Evalue=1e-12, Organism=Escherichia coli, GI1787770, Length=223, Percent_Identity=27.3542600896861, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI72001443, Length=236, Percent_Identity=27.1186440677966, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323192, Length=365, Percent_Identity=24.3835616438356, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI21357875, Length=217, Percent_Identity=24.8847926267281, Blast_Score=74, Evalue=6e-13, Organism=Drosophila melanogaster, GI24646943, Length=217, Percent_Identity=24.8847926267281, Blast_Score=74, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 102349; Mature: 102349
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVLLGGILCCTLISLSPVYAQKKVEVPKYITNIEGVKEYSLNNGLKILLIPDASQSNM CCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCE IVNIVYNVGSRNEGYGEKGMAHLLEHMLFKSTKNLGDIKKMLSDKGGNANGTTWLDRTNY EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCE YEIFPSSDENLKWSIEMEADRMIHATILQSDLDKEFSVVRNEFEIGENNPDGVLQERILS EEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AAYLWHNYGNSTIGSKEDIERVKANTLRVFYEKYYQPDNATLIIAGKFDEKKALQYAGQY HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH FGAIPRPKRVLDKTYTIEPAQDGEKYVELKRAGDSKNVGALYHTASYADKDYAAIDALGE HCCCCCCHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHH ILTADPSGYLYKSLVETQKISSIYFWQPTVRDAGFIYFGAALPNDKDVKETKELIRTELD HHCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH KIASTKYTDQDISRAKAKIIKQIEAVKNNTISYAVNMTEIVGAGDYRLGFLYRDAIENLT HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCEEHHHHHHHHHHHH KEDVQRVAEKYFKANNRTVGIFIPSKDEVRVKPNEYTDEQLSALIKDYKGKALEKEAAPF HHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCH EASIKNLKQNFAEGKLSNGIKYGLIKKEIKGGKVQASFRFPVSNEKDLTDKSDIAGILAQ HHHHHHHHHHHHCCHHCCCCEEEEEHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH LLKTGTKTQSKEQIQDRLDQLKSSINFNFSRQTLTVNINTYKENFKEVMGILADLLANST HHHCCCCCCHHHHHHHHHHHHHHHCCCCEECEEEEEEEHHHHHHHHHHHHHHHHHHHCCC FPENELTKTISEYNTYLESSLNDPQAVAFTEITRSTTKYPKGNMFYTPTIQEQIDAFKKI CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH KQSEIVDFYKNVLGGNNGVGSVVGDLDAKTTGEILESTFGKWNSKAKYELALPTYFETQK HHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH LDKDIITPDKENAVALGRISFKMDRNSADYPAFVMANEMLGSGGFLSARIPMRLREKEGI CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHHCCCCEEEEECCHHHHHHCCC SYGAGSFADIPITNNAASWSYYAFLNPTKKGAVETAAKEEIAKAIKDGFTAEELKSNLTS CCCCCCCEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH WQNERKTRLGVDGTLMELSNNYLQYGVPLEDYDTLETKIKALKVEDVNSVLKKYLSLDKM HHHHHHHCCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSVYAGDFNKKN HHHHCCCCCCCC >Mature Secondary Structure MKNVLLGGILCCTLISLSPVYAQKKVEVPKYITNIEGVKEYSLNNGLKILLIPDASQSNM CCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCE IVNIVYNVGSRNEGYGEKGMAHLLEHMLFKSTKNLGDIKKMLSDKGGNANGTTWLDRTNY EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCE YEIFPSSDENLKWSIEMEADRMIHATILQSDLDKEFSVVRNEFEIGENNPDGVLQERILS EEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AAYLWHNYGNSTIGSKEDIERVKANTLRVFYEKYYQPDNATLIIAGKFDEKKALQYAGQY HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH FGAIPRPKRVLDKTYTIEPAQDGEKYVELKRAGDSKNVGALYHTASYADKDYAAIDALGE HCCCCCCHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHH ILTADPSGYLYKSLVETQKISSIYFWQPTVRDAGFIYFGAALPNDKDVKETKELIRTELD HHCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH KIASTKYTDQDISRAKAKIIKQIEAVKNNTISYAVNMTEIVGAGDYRLGFLYRDAIENLT HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCEEHHHHHHHHHHHH KEDVQRVAEKYFKANNRTVGIFIPSKDEVRVKPNEYTDEQLSALIKDYKGKALEKEAAPF HHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHCCCHHHHHCCCH EASIKNLKQNFAEGKLSNGIKYGLIKKEIKGGKVQASFRFPVSNEKDLTDKSDIAGILAQ HHHHHHHHHHHHCCHHCCCCEEEEEHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH LLKTGTKTQSKEQIQDRLDQLKSSINFNFSRQTLTVNINTYKENFKEVMGILADLLANST HHHCCCCCCHHHHHHHHHHHHHHHCCCCEECEEEEEEEHHHHHHHHHHHHHHHHHHHCCC FPENELTKTISEYNTYLESSLNDPQAVAFTEITRSTTKYPKGNMFYTPTIQEQIDAFKKI CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH KQSEIVDFYKNVLGGNNGVGSVVGDLDAKTTGEILESTFGKWNSKAKYELALPTYFETQK HHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH LDKDIITPDKENAVALGRISFKMDRNSADYPAFVMANEMLGSGGFLSARIPMRLREKEGI CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEHHHHCCCCEEEEECCHHHHHHCCC SYGAGSFADIPITNNAASWSYYAFLNPTKKGAVETAAKEEIAKAIKDGFTAEELKSNLTS CCCCCCCEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH WQNERKTRLGVDGTLMELSNNYLQYGVPLEDYDTLETKIKALKVEDVNSVLKKYLSLDKM HHHHHHHCCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSVYAGDFNKKN HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]