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The map label for this gene is tuaB [H]

Identifier: 146299996

GI number: 146299996

Start: 2695717

End: 2697180

Strand: Direct

Name: tuaB [H]

Synonym: Fjoh_2240

Alternate gene names: 146299996

Gene position: 2695717-2697180 (Clockwise)

Preceding gene: 146299995

Following gene: 146299998

Centisome position: 44.21

GC content: 34.15

Gene sequence:

>1464_bases
ATGCAAAACTCCTCTCTAAAAACACTAGCTGCGAAAGGCATTTTTTGGTCTGCGGTTGATAAATTTGCCGTTCAGATTGG
GCAATTTGTAGTTAGTATTGTACTTGCGCGAATTTTACTGCCAGAGGATTTTGGTCTGATAGGAATGCTGGCTATTTTTA
TGGCCTTGTCACAAACTTTTATTGAAAGCGGTTTAGGAGTAGGTTTAATTCAGCGTCAGGACAGAACAGATGTTGATTTC
TCGACTGTATTTGTCTTTAATTTAGCAGTAAGTGGTTTTTTCTATTTATTACTGTTTTTTTCTGCACCATTAATAGCTGT
TTTTTTTAATCAGCCTCAATTAATAAACCTAGTACGAGTATTGGGTTTAAGTTTGTTTTTGAATGCTGCAGCGATAGTTC
AAAAAACGAAACTGACAATTGCTGTCGATTTCAAATCCATTGCAAAAAGTAATGTAATATCAGTATTTGCAGGCGGGTTA
TGCGGTATTGTGGCAGCAATAAATAATTGCGGAGTCTGGTCGCTGGTTATTCAAAGTCTTGTTGGCGCTTTTGTTTCGTC
AGTTTGTTTGTGGTTTTTAAGCAGCTGGAACCCTTCAGTATTATTTTCAAAGAAATCTTTTAAATCTTTATTTGGCTACG
GATCAAAACTTTTAATGGCAGGTTTGTATGCTCAATTATTAAATAATGTTTATAATATTTGTTTAGGGAAATTTTATCCA
ACAGCTTCATTAGGTTATTATACAAGAGCTAAAAGTTTTGCCGATTTATCAGCCGGAACAATTGTTAGCATAATTCAGCA
GGCAACATTTCCTGTTCTTACTACAGTTCAAAATGATAGAGAAAGATTAGTTTCCATCTACAGCCGAATGATTCGCATGT
CAGCTTTTTTGATTATTCCGTTAATGACACTTATTGCTTTGCTGGCAAAACCAATTGTTGTATTGCTGCTTACCGAAAAA
TGGGTTTCTTTAATTCCGCTTTTACAATGGATGGTTTTTGCCCGTATTTTTTTTCCTATGAGTGCAATTAATATGAACTT
ATTAAATGCAGTTGGCCGTTCAGATTTATACTTAAAAGTCGATTTATCCAAATTACCTCTAACAGTGGCAGCAATGATAA
TCACAATTCCGTTAGGTGTCAAAGCCATCATAATTGGGCATGTAATTACATCGGCTCTATCATTTGTAATAAATGCCTAT
TTACCCGGAAAATTTTATGGTTATGGAGCTGTGAAGCAATTAAAAGATATGCTTCCTTTTTTTGGAGCATCAATAGCAAT
GGCAGTTTTAGTATATGTAACAGCCTATTTTATAGATAATTTAGTAATTCAGTTGTTATTTGGCGGGATAATTGGGCTTG
TAAGTTATTTGTTTATATGCAGACTGCTAAAATTGGAAGAATTAAAAGAAGGCTGGGAACTATTTTTGAGTTTGAGAAGA
AAAACAATAAAAGAAGATATTTAG

Upstream 100 bases:

>100_bases
TTATTAAAACCCGAAACAGTTGCTTTAAGATGTATTCAGACTCTCTTGTCAAATAATACAGGGCAGGTGGTAGATGTGCG
ACTTTAAAGCTAAAAGATAA

Downstream 100 bases:

>100_bases
TATTTTTTAAAATTTGTTCTCCAGAATAACCAAAATCGCAAACCAATATTTTTGAAAAGTAATCCATAAGCTTTTATTTT
AAAAGTATGAACTATTTCGT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MQNSSLKTLAAKGIFWSAVDKFAVQIGQFVVSIVLARILLPEDFGLIGMLAIFMALSQTFIESGLGVGLIQRQDRTDVDF
STVFVFNLAVSGFFYLLLFFSAPLIAVFFNQPQLINLVRVLGLSLFLNAAAIVQKTKLTIAVDFKSIAKSNVISVFAGGL
CGIVAAINNCGVWSLVIQSLVGAFVSSVCLWFLSSWNPSVLFSKKSFKSLFGYGSKLLMAGLYAQLLNNVYNICLGKFYP
TASLGYYTRAKSFADLSAGTIVSIIQQATFPVLTTVQNDRERLVSIYSRMIRMSAFLIIPLMTLIALLAKPIVVLLLTEK
WVSLIPLLQWMVFARIFFPMSAINMNLLNAVGRSDLYLKVDLSKLPLTVAAMIITIPLGVKAIIIGHVITSALSFVINAY
LPGKFYGYGAVKQLKDMLPFFGASIAMAVLVYVTAYFIDNLVIQLLFGGIIGLVSYLFICRLLKLEELKEGWELFLSLRR
KTIKEDI

Sequences:

>Translated_487_residues
MQNSSLKTLAAKGIFWSAVDKFAVQIGQFVVSIVLARILLPEDFGLIGMLAIFMALSQTFIESGLGVGLIQRQDRTDVDF
STVFVFNLAVSGFFYLLLFFSAPLIAVFFNQPQLINLVRVLGLSLFLNAAAIVQKTKLTIAVDFKSIAKSNVISVFAGGL
CGIVAAINNCGVWSLVIQSLVGAFVSSVCLWFLSSWNPSVLFSKKSFKSLFGYGSKLLMAGLYAQLLNNVYNICLGKFYP
TASLGYYTRAKSFADLSAGTIVSIIQQATFPVLTTVQNDRERLVSIYSRMIRMSAFLIIPLMTLIALLAKPIVVLLLTEK
WVSLIPLLQWMVFARIFFPMSAINMNLLNAVGRSDLYLKVDLSKLPLTVAAMIITIPLGVKAIIIGHVITSALSFVINAY
LPGKFYGYGAVKQLKDMLPFFGASIAMAVLVYVTAYFIDNLVIQLLFGGIIGLVSYLFICRLLKLEELKEGWELFLSLRR
KTIKEDI
>Mature_487_residues
MQNSSLKTLAAKGIFWSAVDKFAVQIGQFVVSIVLARILLPEDFGLIGMLAIFMALSQTFIESGLGVGLIQRQDRTDVDF
STVFVFNLAVSGFFYLLLFFSAPLIAVFFNQPQLINLVRVLGLSLFLNAAAIVQKTKLTIAVDFKSIAKSNVISVFAGGL
CGIVAAINNCGVWSLVIQSLVGAFVSSVCLWFLSSWNPSVLFSKKSFKSLFGYGSKLLMAGLYAQLLNNVYNICLGKFYP
TASLGYYTRAKSFADLSAGTIVSIIQQATFPVLTTVQNDRERLVSIYSRMIRMSAFLIIPLMTLIALLAKPIVVLLLTEK
WVSLIPLLQWMVFARIFFPMSAINMNLLNAVGRSDLYLKVDLSKLPLTVAAMIITIPLGVKAIIIGHVITSALSFVINAY
LPGKFYGYGAVKQLKDMLPFFGASIAMAVLVYVTAYFIDNLVIQLLFGGIIGLVSYLFICRLLKLEELKEGWELFLSLRR
KTIKEDI

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=376, Percent_Identity=23.6702127659574, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 53673; Mature: 53673

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCC
>Mature Secondary Structure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HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]