| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299998
Identifier: 146299998
GI number: 146299998
Start: 2698172
End: 2698564
Strand: Direct
Name: 146299998
Synonym: Fjoh_2242
Alternate gene names: NA
Gene position: 2698172-2698564 (Clockwise)
Preceding gene: 146299996
Following gene: 146299999
Centisome position: 44.26
GC content: 27.99
Gene sequence:
>393_bases ATGAATATAATTTTGATTGATTTTCCAAAAGTTGAAAACATACTAGGTAATATTGCGGTAATTGAAAATGGTACAATCCC TTTTGAAATAAAAAGAGTTTATTATTTATATGATATTCCAAGTTCTTCTAAAAGAGGAGGGCACTCTCATAAAAAACTGC AGCAAATCTTAATTGCAATTTCAGGAAGTTTTGATGTGGTTTTAAAAGATGGTAAAACTGAAACAACAATTACTTTAAAT AAACCAGATAAAGGTTTGCTGATCGAAAATAATATATGGCGCGAACTTGAAAATTTTTCATCTGGAGCAGTTTGTCTCGT TTTAGCTTCGGAAATTTTTGATGAAGATGATTATTTAAGGGATTATAATGATTTTTTGAAATCAAAAAAATGA
Upstream 100 bases:
>100_bases TTATTTTGCATATTGTTTTTAAAGAGTTATATATTTGATACGAAAATAACAAATCAATAATTATAGTGCCTAACAAAAAA TGTAAAATTGAAATAAGTTT
Downstream 100 bases:
>100_bases AATTACTCTACATAACACAAAGGGCAAATGAAGAAGGAGGAGTACAGAGAGTACTTTCAATAAAAACCAATTATTTAATC GAAAAGTTTAATTATGAGGT
Product: WxcM domain-containing protein
Products: NA
Alternate protein names: WxcM Domain Protein; Lipopolysaccharide Biosynthesis Protein; WxcM-Like Protein; Bifunctional Acetyl Transferase/Isomerase; WxcM-Like; WblP Protein; WxcM Domain Protein Domain Protein; Sugar Isomerase; FdtA-Like Protein; Wxcm-Like DomaiN-Containing Protein; WxcM-Like Domain-Containing Protein; NDP-Hexose Isomerase; Polysaccharide Glycan Isomerase; Isomerase; DTDP-6-Deoxy-3 4-Keto-Hexulose Isomerase; Acetyl Transferase/Isomerase
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MNIILIDFPKVENILGNIAVIENGTIPFEIKRVYYLYDIPSSSKRGGHSHKKLQQILIAISGSFDVVLKDGKTETTITLN KPDKGLLIENNIWRELENFSSGAVCLVLASEIFDEDDYLRDYNDFLKSKK
Sequences:
>Translated_130_residues MNIILIDFPKVENILGNIAVIENGTIPFEIKRVYYLYDIPSSSKRGGHSHKKLQQILIAISGSFDVVLKDGKTETTITLN KPDKGLLIENNIWRELENFSSGAVCLVLASEIFDEDDYLRDYNDFLKSKK >Mature_130_residues MNIILIDFPKVENILGNIAVIENGTIPFEIKRVYYLYDIPSSSKRGGHSHKKLQQILIAISGSFDVVLKDGKTETTITLN KPDKGLLIENNIWRELENFSSGAVCLVLASEIFDEDDYLRDYNDFLKSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14765; Mature: 14765
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIILIDFPKVENILGNIAVIENGTIPFEIKRVYYLYDIPSSSKRGGHSHKKLQQILIAI CEEEEEECCCHHHHHCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHEE SGSFDVVLKDGKTETTITLNKPDKGLLIENNIWRELENFSSGAVCLVLASEIFDEDDYLR CCCEEEEEECCCCEEEEEECCCCCCEEEECHHHHHHHCCCCCEEEEEEEHHHCCCCCHHH DYNDFLKSKK HHHHHHCCCC >Mature Secondary Structure MNIILIDFPKVENILGNIAVIENGTIPFEIKRVYYLYDIPSSSKRGGHSHKKLQQILIAI CEEEEEECCCHHHHHCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHEE SGSFDVVLKDGKTETTITLNKPDKGLLIENNIWRELENFSSGAVCLVLASEIFDEDDYLR CCCEEEEEECCCCEEEEEECCCCCCEEEECHHHHHHHCCCCCEEEEEEEHHHCCCCCHHH DYNDFLKSKK HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA