| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299553
Identifier: 146299553
GI number: 146299553
Start: 2073362
End: 2074318
Strand: Direct
Name: 146299553
Synonym: Fjoh_1793
Alternate gene names: NA
Gene position: 2073362-2074318 (Clockwise)
Preceding gene: 146299550
Following gene: 146299554
Centisome position: 34.01
GC content: 32.5
Gene sequence:
>957_bases ATGAAAATGTATCGCTTTGTAGTGGTTCTGTGCTTGTTTTTTTTGTCTTGTGACCAAAAAACAAAGGTTGAAAAAGAGGT TGAAGAAATTCCGGTTGATATTAAAGTAGAACGTTTTGATAAAGTGTTTTTTGAGACCAAACCAGAAGATCTGGCTAAAG TAAAAAAACAATATCCGTTCTTTTTTCCAGAAGGAAATGATGACAACGTCTGGCTTCAAAAAATGAAAGAACCAATCTGG AGAGAAGTTTATGATGAAGTCCAAAAAAAATACGCCAATTTTGAGCCTGTTCGTGAAGAGTTTAACGAACTTTTTAAACA CGTAAAATATTATTTTCCAAAAACAAAAACACCAAAAGTTATTACAGTGATTGGTGAAATGGATTATAATGCAAAGGCAA TTTATGCAGACAGTCTTGTAATTGTTGCCTTAGAGTTGTATTTAGGAAGAGAGCATAAGTTTTATGAGTTTCCAAATTAT TTAAAATACAATTTTGAGGAAAGACAAATTATGCCGGATGTAGTTTCGAGTTTTACTTACCGAAACATTCCGTCTTATCC TGATAAAAATTTAATATCTCAGATGATTTTTGAAGGAAAACAATTGTATGCAAAAGATTTGCTTCTGCCTCAATATACCG ATGCCGAAAAAATAGGTTACAAACCTGAGCAGATAAAATGGTGTGAAGAAAATGAAAGCTATATGTGGCGTTATTTTCTT GAAAACGAAATGCTGTATAGTTTAGATCCTAAATTAACAACACGTTTTATAGTGCCGGCTCCGTTTTCTAAATTCTATCT GGAAATAGATAACGATTCACCGGGAAGAGTGGGCGCCTGGATTGGATGGCAGATTGTACGTTCGTATATGAAAAACAATA ACGTTTTGCTGTCAGAATTATTAAAAGTAAATGCAAAAGAAATTTTCGAAAAGTCAAAATATAAACCTAAGAAATAA
Upstream 100 bases:
>100_bases GATTTAAGATACAGGGATGTATATTTGCAGAATTATTTTTGATTACAGATATCATATATATGTAATCTAATTCCAGCAAC ACAAATCTAATTAAAATAAA
Downstream 100 bases:
>100_bases TGTCAAATACAATAAAATCAGAAATTAAATTCAACGTCGAATTAGACGAAAACCGCGTTCCCGAAAAATTAACCTGGAGC GCTCAGGACGGCGGTGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Gliding Motility Protein; GldB Family Lipoprotein; Protein Involved In Gliding Motility Gldb; Gliding Motility-Associated Lipoprotein GldB
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKMYRFVVVLCLFFLSCDQKTKVEKEVEEIPVDIKVERFDKVFFETKPEDLAKVKKQYPFFFPEGNDDNVWLQKMKEPIW REVYDEVQKKYANFEPVREEFNELFKHVKYYFPKTKTPKVITVIGEMDYNAKAIYADSLVIVALELYLGREHKFYEFPNY LKYNFEERQIMPDVVSSFTYRNIPSYPDKNLISQMIFEGKQLYAKDLLLPQYTDAEKIGYKPEQIKWCEENESYMWRYFL ENEMLYSLDPKLTTRFIVPAPFSKFYLEIDNDSPGRVGAWIGWQIVRSYMKNNNVLLSELLKVNAKEIFEKSKYKPKK
Sequences:
>Translated_318_residues MKMYRFVVVLCLFFLSCDQKTKVEKEVEEIPVDIKVERFDKVFFETKPEDLAKVKKQYPFFFPEGNDDNVWLQKMKEPIW REVYDEVQKKYANFEPVREEFNELFKHVKYYFPKTKTPKVITVIGEMDYNAKAIYADSLVIVALELYLGREHKFYEFPNY LKYNFEERQIMPDVVSSFTYRNIPSYPDKNLISQMIFEGKQLYAKDLLLPQYTDAEKIGYKPEQIKWCEENESYMWRYFL ENEMLYSLDPKLTTRFIVPAPFSKFYLEIDNDSPGRVGAWIGWQIVRSYMKNNNVLLSELLKVNAKEIFEKSKYKPKK >Mature_318_residues MKMYRFVVVLCLFFLSCDQKTKVEKEVEEIPVDIKVERFDKVFFETKPEDLAKVKKQYPFFFPEGNDDNVWLQKMKEPIW REVYDEVQKKYANFEPVREEFNELFKHVKYYFPKTKTPKVITVIGEMDYNAKAIYADSLVIVALELYLGREHKFYEFPNY LKYNFEERQIMPDVVSSFTYRNIPSYPDKNLISQMIFEGKQLYAKDLLLPQYTDAEKIGYKPEQIKWCEENESYMWRYFL ENEMLYSLDPKLTTRFIVPAPFSKFYLEIDNDSPGRVGAWIGWQIVRSYMKNNNVLLSELLKVNAKEIFEKSKYKPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38306; Mature: 38306
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMYRFVVVLCLFFLSCDQKTKVEKEVEEIPVDIKVERFDKVFFETKPEDLAKVKKQYPF CHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCE FFPEGNDDNVWLQKMKEPIWREVYDEVQKKYANFEPVREEFNELFKHVKYYFPKTKTPKV ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEE ITVIGEMDYNAKAIYADSLVIVALELYLGREHKFYEFPNYLKYNFEERQIMPDVVSSFTY EEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHH RNIPSYPDKNLISQMIFEGKQLYAKDLLLPQYTDAEKIGYKPEQIKWCEENESYMWRYFL CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHCCCHHHCCCCCCCCCEEEEEEE ENEMLYSLDPKLTTRFIVPAPFSKFYLEIDNDSPGRVGAWIGWQIVRSYMKNNNVLLSEL CCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHH LKVNAKEIFEKSKYKPKK HHCCHHHHHHHCCCCCCC >Mature Secondary Structure MKMYRFVVVLCLFFLSCDQKTKVEKEVEEIPVDIKVERFDKVFFETKPEDLAKVKKQYPF CHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHCCE FFPEGNDDNVWLQKMKEPIWREVYDEVQKKYANFEPVREEFNELFKHVKYYFPKTKTPKV ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEE ITVIGEMDYNAKAIYADSLVIVALELYLGREHKFYEFPNYLKYNFEERQIMPDVVSSFTY EEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHH RNIPSYPDKNLISQMIFEGKQLYAKDLLLPQYTDAEKIGYKPEQIKWCEENESYMWRYFL CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHCCCHHHCCCCCCCCCEEEEEEE ENEMLYSLDPKLTTRFIVPAPFSKFYLEIDNDSPGRVGAWIGWQIVRSYMKNNNVLLSEL CCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHH LKVNAKEIFEKSKYKPKK HHCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA