| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299554
Identifier: 146299554
GI number: 146299554
Start: 2074318
End: 2074653
Strand: Direct
Name: 146299554
Synonym: Fjoh_1794
Alternate gene names: NA
Gene position: 2074318-2074653 (Clockwise)
Preceding gene: 146299553
Following gene: 146299555
Centisome position: 34.02
GC content: 37.5
Gene sequence:
>336_bases ATGTCAAATACAATAAAATCAGAAATTAAATTCAACGTCGAATTAGACGAAAACCGCGTTCCCGAAAAATTAACCTGGAG CGCTCAGGACGGCGGTGTTCTTGCAGAAGAAGCAAAAGCTATTATGCTTTCAATTTGGGACAGTAAAGCACAGGAAACAA TGCGTATCGATTTATGGACAAAAGATATGCCGGTAGACGAAATGAAAATTTTCTTTCACCAGACTTTAGTAGCAATGGCT GATACTTTTAAACGTGCAACCGATGACGAAAAAATGTCAGATACAATGAAAGACTTCTGTGATTACTTTGCAGAAAAACT GGAGCTGACTAAATAA
Upstream 100 bases:
>100_bases TACGTTCGTATATGAAAAACAATAACGTTTTGCTGTCAGAATTATTAAAAGTAAATGCAAAAGAAATTTTCGAAAAGTCA AAATATAAACCTAAGAAATA
Downstream 100 bases:
>100_bases TAGAAAATCCAATATTTTAAAATCCCAAATTCCAATTGCAAAACTGGAATTTGGGATTTTTTTTGAACATAAATTACATA AAAAAAACGCTGTAAAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: Gliding Motility-Associated Protein Gldc; Gliding Motility-Associated Protein GldC; Motility-Like Protein; Protein Involved In Gliding Motility Gldc
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWTKDMPVDEMKIFFHQTLVAMA DTFKRATDDEKMSDTMKDFCDYFAEKLELTK
Sequences:
>Translated_111_residues MSNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWTKDMPVDEMKIFFHQTLVAMA DTFKRATDDEKMSDTMKDFCDYFAEKLELTK >Mature_110_residues SNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWTKDMPVDEMKIFFHQTLVAMAD TFKRATDDEKMSDTMKDFCDYFAEKLELTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12908; Mature: 12777
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWT CCCCCCCCEEEEEEECCCCCCCCEEECCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEEEC KDMPVDEMKIFFHQTLVAMADTFKRATDDEKMSDTMKDFCDYFAEKLELTK CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWT CCCCCCCEEEEEEECCCCCCCCEEECCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEEEC KDMPVDEMKIFFHQTLVAMADTFKRATDDEKMSDTMKDFCDYFAEKLELTK CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA