Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299554

Identifier: 146299554

GI number: 146299554

Start: 2074318

End: 2074653

Strand: Direct

Name: 146299554

Synonym: Fjoh_1794

Alternate gene names: NA

Gene position: 2074318-2074653 (Clockwise)

Preceding gene: 146299553

Following gene: 146299555

Centisome position: 34.02

GC content: 37.5

Gene sequence:

>336_bases
ATGTCAAATACAATAAAATCAGAAATTAAATTCAACGTCGAATTAGACGAAAACCGCGTTCCCGAAAAATTAACCTGGAG
CGCTCAGGACGGCGGTGTTCTTGCAGAAGAAGCAAAAGCTATTATGCTTTCAATTTGGGACAGTAAAGCACAGGAAACAA
TGCGTATCGATTTATGGACAAAAGATATGCCGGTAGACGAAATGAAAATTTTCTTTCACCAGACTTTAGTAGCAATGGCT
GATACTTTTAAACGTGCAACCGATGACGAAAAAATGTCAGATACAATGAAAGACTTCTGTGATTACTTTGCAGAAAAACT
GGAGCTGACTAAATAA

Upstream 100 bases:

>100_bases
TACGTTCGTATATGAAAAACAATAACGTTTTGCTGTCAGAATTATTAAAAGTAAATGCAAAAGAAATTTTCGAAAAGTCA
AAATATAAACCTAAGAAATA

Downstream 100 bases:

>100_bases
TAGAAAATCCAATATTTTAAAATCCCAAATTCCAATTGCAAAACTGGAATTTGGGATTTTTTTTGAACATAAATTACATA
AAAAAAACGCTGTAAAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: Gliding Motility-Associated Protein Gldc; Gliding Motility-Associated Protein GldC; Motility-Like Protein; Protein Involved In Gliding Motility Gldc

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWTKDMPVDEMKIFFHQTLVAMA
DTFKRATDDEKMSDTMKDFCDYFAEKLELTK

Sequences:

>Translated_111_residues
MSNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWTKDMPVDEMKIFFHQTLVAMA
DTFKRATDDEKMSDTMKDFCDYFAEKLELTK
>Mature_110_residues
SNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWTKDMPVDEMKIFFHQTLVAMAD
TFKRATDDEKMSDTMKDFCDYFAEKLELTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12908; Mature: 12777

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWT
CCCCCCCCEEEEEEECCCCCCCCEEECCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEEEC
KDMPVDEMKIFFHQTLVAMADTFKRATDDEKMSDTMKDFCDYFAEKLELTK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNTIKSEIKFNVELDENRVPEKLTWSAQDGGVLAEEAKAIMLSIWDSKAQETMRIDLWT
CCCCCCCEEEEEEECCCCCCCCEEECCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEEEC
KDMPVDEMKIFFHQTLVAMADTFKRATDDEKMSDTMKDFCDYFAEKLELTK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA