| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299457
Identifier: 146299457
GI number: 146299457
Start: 1967289
End: 1968143
Strand: Direct
Name: 146299457
Synonym: Fjoh_1697
Alternate gene names: NA
Gene position: 1967289-1968143 (Clockwise)
Preceding gene: 146299456
Following gene: 146299459
Centisome position: 32.27
GC content: 32.75
Gene sequence:
>855_bases ATGAAAAAGTATATCATTTTATTTTTTTCTTTTTTGCTCTTGAGTTGTTCTAATGATGATGTAAGCGTTCAAAAAAGCAA AGAATCTAAAATAGTGGTTGAAGGATGGATTGAAGAAGGTGATTTTGCTAATGTTTTACTGTCGAGCAGTATTCCGGTTA GAGATGTTGTAGATACCACAAATGTTTTGCAGCACGTTATCAGGTCTGCAAAAATCACAATTTCTGACGGTCAGAATTCA GAAGTTTTAAGAGTAAAAAATGATAAAAACAGAATTCCGCCATTTGTTTATTTTGGAAATACATTAAAAGGCGAAGCTGG AAAAGAGTATTCTATTAAAATTGAATATTTGAACCGCGTAGTAGAAGCAGTTACTACAATTCCAAAATCGGTGCCTCTTA TTAGTGCTGAATATGTAAAAGAAAAACCTGCGGATACTACAGGTTATATTTTTGTAAAATTTGATGATCCTCTTAATGAA AAAAACTACTATCAGATAGCAACAAAAATTGAAGGGGAAGAGCCCATTTTTGTCCCTTCATTTTATGGTAATCTGGATGA TAAGAATTTTGAAAGTCCTTCGGTTGCATTAAAAATTAACAGGGGAGTAATATTATTTCCAGAAACACAACTCAAACCTT ATTTTAATGATGGAAGTGTTATTCATGTAAAACTACGAACGCAGACAAAAGAAGCGTTAGATTTCTGGAACAGCTGGCAA AACGAAATCGTAAACAGCAAAAATCCTATTTATCCATCAAACACAAGTTTGAAATCGAATATAAAAGGAGGAATTGGCAT TTGGGCAGGATATGGGCAAAGCACCATAATTGTAAAAACACCTGCTAAAAAATAA
Upstream 100 bases:
>100_bases TAGAACTACTGATAATAAAAATGAAATATTAGTTACACAGGATAAAAAGGTTTTATATCGAATTTTGCCTTCAATAAGCT GGCGATTTAAATTTTAAATT
Downstream 100 bases:
>100_bases GCCGATCTGAATAACTCAAATCGGCTTTGTTTTTTATTTTAAAGATATATTACTTTTGAAAACTTGCAGCAAAATCATTA AACTTAGTATAGAAAGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKKYIILFFSFLLLSCSNDDVSVQKSKESKIVVEGWIEEGDFANVLLSSSIPVRDVVDTTNVLQHVIRSAKITISDGQNS EVLRVKNDKNRIPPFVYFGNTLKGEAGKEYSIKIEYLNRVVEAVTTIPKSVPLISAEYVKEKPADTTGYIFVKFDDPLNE KNYYQIATKIEGEEPIFVPSFYGNLDDKNFESPSVALKINRGVILFPETQLKPYFNDGSVIHVKLRTQTKEALDFWNSWQ NEIVNSKNPIYPSNTSLKSNIKGGIGIWAGYGQSTIIVKTPAKK
Sequences:
>Translated_284_residues MKKYIILFFSFLLLSCSNDDVSVQKSKESKIVVEGWIEEGDFANVLLSSSIPVRDVVDTTNVLQHVIRSAKITISDGQNS EVLRVKNDKNRIPPFVYFGNTLKGEAGKEYSIKIEYLNRVVEAVTTIPKSVPLISAEYVKEKPADTTGYIFVKFDDPLNE KNYYQIATKIEGEEPIFVPSFYGNLDDKNFESPSVALKINRGVILFPETQLKPYFNDGSVIHVKLRTQTKEALDFWNSWQ NEIVNSKNPIYPSNTSLKSNIKGGIGIWAGYGQSTIIVKTPAKK >Mature_284_residues MKKYIILFFSFLLLSCSNDDVSVQKSKESKIVVEGWIEEGDFANVLLSSSIPVRDVVDTTNVLQHVIRSAKITISDGQNS EVLRVKNDKNRIPPFVYFGNTLKGEAGKEYSIKIEYLNRVVEAVTTIPKSVPLISAEYVKEKPADTTGYIFVKFDDPLNE KNYYQIATKIEGEEPIFVPSFYGNLDDKNFESPSVALKINRGVILFPETQLKPYFNDGSVIHVKLRTQTKEALDFWNSWQ NEIVNSKNPIYPSNTSLKSNIKGGIGIWAGYGQSTIIVKTPAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31972; Mature: 31972
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYIILFFSFLLLSCSNDDVSVQKSKESKIVVEGWIEEGDFANVLLSSSIPVRDVVDTT CCEEEHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHH NVLQHVIRSAKITISDGQNSEVLRVKNDKNRIPPFVYFGNTLKGEAGKEYSIKIEYLNRV HHHHHHHHHCEEEEECCCCCCEEEEECCCCCCCCEEEECCEECCCCCCEEEEEHHHHHHH VEAVTTIPKSVPLISAEYVKEKPADTTGYIFVKFDDPLNEKNYYQIATKIEGEEPIFVPS HHHHHHCCCCCCEEEHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEEH FYGNLDDKNFESPSVALKINRGVILFPETQLKPYFNDGSVIHVKLRTQTKEALDFWNSWQ HCCCCCCCCCCCCEEEEEECCCEEEEECCCCCEEECCCCEEEEEEECCHHHHHHHHHHHH NEIVNSKNPIYPSNTSLKSNIKGGIGIWAGYGQSTIIVKTPAKK HHHCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCEEEEECCCCC >Mature Secondary Structure MKKYIILFFSFLLLSCSNDDVSVQKSKESKIVVEGWIEEGDFANVLLSSSIPVRDVVDTT CCEEEHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHH NVLQHVIRSAKITISDGQNSEVLRVKNDKNRIPPFVYFGNTLKGEAGKEYSIKIEYLNRV HHHHHHHHHCEEEEECCCCCCEEEEECCCCCCCCEEEECCEECCCCCCEEEEEHHHHHHH VEAVTTIPKSVPLISAEYVKEKPADTTGYIFVKFDDPLNEKNYYQIATKIEGEEPIFVPS HHHHHHCCCCCCEEEHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEEH FYGNLDDKNFESPSVALKINRGVILFPETQLKPYFNDGSVIHVKLRTQTKEALDFWNSWQ HCCCCCCCCCCCCEEEEEECCCEEEEECCCCCEEECCCCEEEEEEECCHHHHHHHHHHHH NEIVNSKNPIYPSNTSLKSNIKGGIGIWAGYGQSTIIVKTPAKK HHHCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA