Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299456

Identifier: 146299456

GI number: 146299456

Start: 1965015

End: 1967285

Strand: Direct

Name: 146299456

Synonym: Fjoh_1696

Alternate gene names: NA

Gene position: 1965015-1967285 (Clockwise)

Preceding gene: 146299455

Following gene: 146299457

Centisome position: 32.23

GC content: 32.28

Gene sequence:

>2271_bases
GTGTCAAAATCTGTTATACTCTTTTTTTTATTCTGTTTTTCAAACATTTTTGCGCAGTCAAATATAAAGATCACAGGAAA
TGTAAAATCTTCTGACAACCAGACTCTTGCAGGTGTCCATGTTTTATTTGAAATAAATCAAAAACAAAAACATGCAGTTA
CCGACACTTTAGGTAACTTTTTTGAAAGTATTCCTGCAGGGGATATGGCTTTAACGATTAATCAGTTAGGTTTTACTTCA
AAAACAATTTACTGCAGTGTTCAAAAGGACACCATGTTTTCTATTATTTTAGAAAAAGATATTGCTCAGTTAAAAGAAGT
AATTATTTCAAATGATAAGAAAAACGGAATTAAAACCTTGTCAGGCGGAAAACTTTCTTTTAATCTAAAAGACCTAAACT
CCGTTCCAACGCTTTTAGGAACAACAGATGTTATAAAACTTTTACAGCTAACGCCCGGAGTGCAAAATTCAGGCGATGCA
AATGGTTATTTATACGTTAGGGGCGGCGATCCCGGACACAACGCGATTTTGTATAATGAAACGCCAATTTATGGAATGTC
GCATTTACTGGGAATATTTCCTTTCTACAATACAGATCATATTAAAGATATAGAATTTGATAAATCAAGCTCAAATGCAA
AATACGGCGGACGTTTGAGTTCTACAACGCTTTTAAATACCAATAAAAAAATACCTTCTGAATTCTCAATTCAGGGAAAT
GCCGGAATTTTGGCTTCGCAATTAACATTAGCAGTTCCGATTAACGATAAAAACGGTTTCTATATTTCTGGCAGAAAAAC
GTATATTGATGAAGTTGTGGGGCCGTTATTAAAATCAGATTCAGAAAACGATGTTCAGGATATGAAATATGGTTTTTCGG
ATGCAAACTTTACTTTTTTATCTCAAATTTCTACAAAGAATTTATTTTCATTTGATGCCTTTTATAGTGGAGATAAATTG
AAAGTTAAAGATGGAGATCTGGCACTTCAAACCAATTTAAAATGGAATAACTTTACAGTATCGCCATCTTTAACGACGAT
ATTTTCTCCTAAAGTAAGCATGTCTAATTCTGTTTATTTTAGTCATTATTCTAATGATTTAGATATGGAACAGGCAGCGA
TTCATTTTGGGGTTTCTTCTTATGTAAAGGATTTTGGGTTTGCAAATGCAGTTCGATTTTCGATTCATAATATTCCATTT
GAATCAGGATTGCAATATGTTTATCACAATTTACAGCCTCAAAAAGTAAATGTAGAAAACCTGACAACGATTGATAATAA
TTCACAAAGTGTGATTAATGCCAATGAAGCAGCAATTTTTGCAAACGCAAAACCCAAATTGTTTGAGAATGTAACCGCAG
ATTTAGGTCTTCGAATTAATTATTACACTTCTGGAGCAAATTCGTATCTGCATTTTCAGCCGAGAGCGGTATTGAATTAT
TATGCAAATGAAAAATATTCGTTTTATGCTTCTTACAACAGACAGTATCAATATTTGAGTTTAATTACAACTTCAAGCGT
AGGTATCCCGACTGATTTTTGGATTGCAAGTTCGGATGGTATTAAGCCGCAGTCTTCAAATGAATTTTCAATTGGATCAA
ACCAAAATATTACCAGAAATTTTTCTTCTTCTTTTGGAGGATTTTACCGTTCGATGAAAAATCTGCTCGAATACCCTTAT
GGAATAACGCAGTTTAATGAAACTACAACTTTAAAAAATGATTTGTATGTGGGCGAAGGGAAAGCGTATGGATTTGAAAT
GATGCTCAAAAAAAGCAACGGAAAATTTACGGGCTGGCTTAGTTATACCTTAAGCTGGTCTGAACGAAATTTTGATGAAT
TAAATAACGGAAAAACATATTTTGCAAAGTATGACAGAAGGCATAGTCTTTCTGTAGTGGGAATGTACGATTTAAACGCA
AAGTGGAATTTTGGAGTTACCCAGATATTTGGTTCCGGAAATCGATTTACAATGCCGACTTCCTGGTATTTTATAAACAA
TAATCCGGTGAAAGAATATTCAGGATATAATAATGCTCAAATGCCAAATTATATTAGAACAGACATCTCTGCCAATTATT
ATTTTATAAAAACAGCAAAAAAAGAAAGCGCATTAAATTTCTCTATTTACAATACTTTCAATATATCAAATCCTATTTAT
GTGGTTTTAAATGTTAGAACTACTGATAATAAAAATGAAATATTAGTTACACAGGATAAAAAGGTTTTATATCGAATTTT
GCCTTCAATAAGCTGGCGATTTAAATTTTAA

Upstream 100 bases:

>100_bases
GTATTTGAAGAAATTGAAATAAGATTAAAACTAAACAATTATAACCTGATGTATTTGGGTTATAATTGTTTACTTTCGCA
CTTTTCTTATTAAAATTTAC

Downstream 100 bases:

>100_bases
ATTATGAAAAAGTATATCATTTTATTTTTTTCTTTTTTGCTCTTGAGTTGTTCTAATGATGATGTAAGCGTTCAAAAAAG
CAAAGAATCTAAAATAGTGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Outer Membrane Protein; NB-Dependent Receptor; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; NB Dependent Receptor Domain Protein; NB-Dependent Outer Membrane Receptor; NB Family Protein; NB-Dependent Receptor Plug Domain Protein; NB Dependent Receptor Domain-Containing Protein

Number of amino acids: Translated: 756; Mature: 755

Protein sequence:

>756_residues
MSKSVILFFLFCFSNIFAQSNIKITGNVKSSDNQTLAGVHVLFEINQKQKHAVTDTLGNFFESIPAGDMALTINQLGFTS
KTIYCSVQKDTMFSIILEKDIAQLKEVIISNDKKNGIKTLSGGKLSFNLKDLNSVPTLLGTTDVIKLLQLTPGVQNSGDA
NGYLYVRGGDPGHNAILYNETPIYGMSHLLGIFPFYNTDHIKDIEFDKSSSNAKYGGRLSSTTLLNTNKKIPSEFSIQGN
AGILASQLTLAVPINDKNGFYISGRKTYIDEVVGPLLKSDSENDVQDMKYGFSDANFTFLSQISTKNLFSFDAFYSGDKL
KVKDGDLALQTNLKWNNFTVSPSLTTIFSPKVSMSNSVYFSHYSNDLDMEQAAIHFGVSSYVKDFGFANAVRFSIHNIPF
ESGLQYVYHNLQPQKVNVENLTTIDNNSQSVINANEAAIFANAKPKLFENVTADLGLRINYYTSGANSYLHFQPRAVLNY
YANEKYSFYASYNRQYQYLSLITTSSVGIPTDFWIASSDGIKPQSSNEFSIGSNQNITRNFSSSFGGFYRSMKNLLEYPY
GITQFNETTTLKNDLYVGEGKAYGFEMMLKKSNGKFTGWLSYTLSWSERNFDELNNGKTYFAKYDRRHSLSVVGMYDLNA
KWNFGVTQIFGSGNRFTMPTSWYFINNNPVKEYSGYNNAQMPNYIRTDISANYYFIKTAKKESALNFSIYNTFNISNPIY
VVLNVRTTDNKNEILVTQDKKVLYRILPSISWRFKF

Sequences:

>Translated_756_residues
MSKSVILFFLFCFSNIFAQSNIKITGNVKSSDNQTLAGVHVLFEINQKQKHAVTDTLGNFFESIPAGDMALTINQLGFTS
KTIYCSVQKDTMFSIILEKDIAQLKEVIISNDKKNGIKTLSGGKLSFNLKDLNSVPTLLGTTDVIKLLQLTPGVQNSGDA
NGYLYVRGGDPGHNAILYNETPIYGMSHLLGIFPFYNTDHIKDIEFDKSSSNAKYGGRLSSTTLLNTNKKIPSEFSIQGN
AGILASQLTLAVPINDKNGFYISGRKTYIDEVVGPLLKSDSENDVQDMKYGFSDANFTFLSQISTKNLFSFDAFYSGDKL
KVKDGDLALQTNLKWNNFTVSPSLTTIFSPKVSMSNSVYFSHYSNDLDMEQAAIHFGVSSYVKDFGFANAVRFSIHNIPF
ESGLQYVYHNLQPQKVNVENLTTIDNNSQSVINANEAAIFANAKPKLFENVTADLGLRINYYTSGANSYLHFQPRAVLNY
YANEKYSFYASYNRQYQYLSLITTSSVGIPTDFWIASSDGIKPQSSNEFSIGSNQNITRNFSSSFGGFYRSMKNLLEYPY
GITQFNETTTLKNDLYVGEGKAYGFEMMLKKSNGKFTGWLSYTLSWSERNFDELNNGKTYFAKYDRRHSLSVVGMYDLNA
KWNFGVTQIFGSGNRFTMPTSWYFINNNPVKEYSGYNNAQMPNYIRTDISANYYFIKTAKKESALNFSIYNTFNISNPIY
VVLNVRTTDNKNEILVTQDKKVLYRILPSISWRFKF
>Mature_755_residues
SKSVILFFLFCFSNIFAQSNIKITGNVKSSDNQTLAGVHVLFEINQKQKHAVTDTLGNFFESIPAGDMALTINQLGFTSK
TIYCSVQKDTMFSIILEKDIAQLKEVIISNDKKNGIKTLSGGKLSFNLKDLNSVPTLLGTTDVIKLLQLTPGVQNSGDAN
GYLYVRGGDPGHNAILYNETPIYGMSHLLGIFPFYNTDHIKDIEFDKSSSNAKYGGRLSSTTLLNTNKKIPSEFSIQGNA
GILASQLTLAVPINDKNGFYISGRKTYIDEVVGPLLKSDSENDVQDMKYGFSDANFTFLSQISTKNLFSFDAFYSGDKLK
VKDGDLALQTNLKWNNFTVSPSLTTIFSPKVSMSNSVYFSHYSNDLDMEQAAIHFGVSSYVKDFGFANAVRFSIHNIPFE
SGLQYVYHNLQPQKVNVENLTTIDNNSQSVINANEAAIFANAKPKLFENVTADLGLRINYYTSGANSYLHFQPRAVLNYY
ANEKYSFYASYNRQYQYLSLITTSSVGIPTDFWIASSDGIKPQSSNEFSIGSNQNITRNFSSSFGGFYRSMKNLLEYPYG
ITQFNETTTLKNDLYVGEGKAYGFEMMLKKSNGKFTGWLSYTLSWSERNFDELNNGKTYFAKYDRRHSLSVVGMYDLNAK
WNFGVTQIFGSGNRFTMPTSWYFINNNPVKEYSGYNNAQMPNYIRTDISANYYFIKTAKKESALNFSIYNTFNISNPIYV
VLNVRTTDNKNEILVTQDKKVLYRILPSISWRFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85188; Mature: 85057

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSVILFFLFCFSNIFAQSNIKITGNVKSSDNQTLAGVHVLFEINQKQKHAVTDTLGNF
CCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECCCHHHHHHHHHHHH
FESIPAGDMALTINQLGFTSKTIYCSVQKDTMFSIILEKDIAQLKEVIISNDKKNGIKTL
HHHCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEE
SGGKLSFNLKDLNSVPTLLGTTDVIKLLQLTPGVQNSGDANGYLYVRGGDPGHNAILYNE
CCCEEEEEECCCCCCCHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECC
TPIYGMSHLLGIFPFYNTDHIKDIEFDKSSSNAKYGGRLSSTTLLNTNKKIPSEFSIQGN
CCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEECCEEEEECCCCCCCCEEECCC
AGILASQLTLAVPINDKNGFYISGRKTYIDEVVGPLLKSDSENDVQDMKYGFSDANFTFL
CCEEEEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEE
SQISTKNLFSFDAFYSGDKLKVKDGDLALQTNLKWNNFTVSPSLTTIFSPKVSMSNSVYF
EECCCCCEEEEEEEECCCEEEEECCCEEEEEECCCCCEEECCCEEEEECCCCCCCCCEEE
SHYSNDLDMEQAAIHFGVSSYVKDFGFANAVRFSIHNIPFESGLQYVYHNLQPQKVNVEN
EECCCCCCHHHHHHHHCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCE
LTTIDNNSQSVINANEAAIFANAKPKLFENVTADLGLRINYYTSGANSYLHFQPRAVLNY
EEEECCCCCEEEECCCEEEEECCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHHHH
YANEKYSFYASYNRQYQYLSLITTSSVGIPTDFWIASSDGIKPQSSNEFSIGSNQNITRN
HCCCEEEEEEECCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCEEC
FSSSFGGFYRSMKNLLEYPYGITQFNETTTLKNDLYVGEGKAYGFEMMLKKSNGKFTGWL
HHHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCEEEECCCCCCEEEEEEECCCCEEEEE
SYTLSWSERNFDELNNGKTYFAKYDRRHSLSVVGMYDLNAKWNFGVTQIFGSGNRFTMPT
EEEEEECCCCHHHCCCCEEEEEECCCCCCEEEEEEEECCCEECCCEEEEECCCCEEECCE
SWYFINNNPVKEYSGYNNAQMPNYIRTDISANYYFIKTAKKESALNFSIYNTFNISNPIY
EEEEECCCCHHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCEEEEEEEEEECCCCEE
VVLNVRTTDNKNEILVTQDKKVLYRILPSISWRFKF
EEEEEEECCCCCCEEEECCHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
SKSVILFFLFCFSNIFAQSNIKITGNVKSSDNQTLAGVHVLFEINQKQKHAVTDTLGNF
CCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECCCHHHHHHHHHHHH
FESIPAGDMALTINQLGFTSKTIYCSVQKDTMFSIILEKDIAQLKEVIISNDKKNGIKTL
HHHCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEE
SGGKLSFNLKDLNSVPTLLGTTDVIKLLQLTPGVQNSGDANGYLYVRGGDPGHNAILYNE
CCCEEEEEECCCCCCCHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECC
TPIYGMSHLLGIFPFYNTDHIKDIEFDKSSSNAKYGGRLSSTTLLNTNKKIPSEFSIQGN
CCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEECCEEEEECCCCCCCCEEECCC
AGILASQLTLAVPINDKNGFYISGRKTYIDEVVGPLLKSDSENDVQDMKYGFSDANFTFL
CCEEEEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEE
SQISTKNLFSFDAFYSGDKLKVKDGDLALQTNLKWNNFTVSPSLTTIFSPKVSMSNSVYF
EECCCCCEEEEEEEECCCEEEEECCCEEEEEECCCCCEEECCCEEEEECCCCCCCCCEEE
SHYSNDLDMEQAAIHFGVSSYVKDFGFANAVRFSIHNIPFESGLQYVYHNLQPQKVNVEN
EECCCCCCHHHHHHHHCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCE
LTTIDNNSQSVINANEAAIFANAKPKLFENVTADLGLRINYYTSGANSYLHFQPRAVLNY
EEEECCCCCEEEECCCEEEEECCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHHHH
YANEKYSFYASYNRQYQYLSLITTSSVGIPTDFWIASSDGIKPQSSNEFSIGSNQNITRN
HCCCEEEEEEECCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCEEC
FSSSFGGFYRSMKNLLEYPYGITQFNETTTLKNDLYVGEGKAYGFEMMLKKSNGKFTGWL
HHHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCEEEECCCCCCEEEEEEECCCCEEEEE
SYTLSWSERNFDELNNGKTYFAKYDRRHSLSVVGMYDLNAKWNFGVTQIFGSGNRFTMPT
EEEEEECCCCHHHCCCCEEEEEECCCCCCEEEEEEEECCCEECCCEEEEECCCCEEECCE
SWYFINNNPVKEYSGYNNAQMPNYIRTDISANYYFIKTAKKESALNFSIYNTFNISNPIY
EEEEECCCCHHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCEEEEEEEEEECCCCEE
VVLNVRTTDNKNEILVTQDKKVLYRILPSISWRFKF
EEEEEEECCCCCCEEEECCHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA