| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299310
Identifier: 146299310
GI number: 146299310
Start: 1789295
End: 1790539
Strand: Direct
Name: 146299310
Synonym: Fjoh_1550
Alternate gene names: NA
Gene position: 1789295-1790539 (Clockwise)
Preceding gene: 146299307
Following gene: 146299317
Centisome position: 29.35
GC content: 34.14
Gene sequence:
>1245_bases ATGAATCAGATAAAAAAACTTCTCATAATTGGATTCGTCTGGCCTGAGCCAAATTCTTCTGCAGCAGGCGGAAGGATGAT GCAGCTGATTTCTATTTTTAAAGAAAATGGTTTTGAAATTACGTTTGCCAGTGCAGCTCTAGACAGTGATTTTATGGTTG ATTTATCTGAATTTGGAATAGAAAAGAAAAGTATTGAGCTCAATTCTGCCAGTTTCGATGATTTTATAGCTGCATTAAAT CCTAATGTTGTATTGTTTGATCGTTTTATGATCGAAGAACAATTTGGCTGGAGAGTAACGGAAAAGTGTCCAAATGCAAT CCGAATTTTAGATACAGAAGATTTGCATTGTCTGCGAACAGCAAGGCAGAAAGCTTTTAAAGAAAACAGAAAATTTGAAA TACACGATTTGTTTTCTGAAGAAGTGGCAAAACGAGAAATTGCGAGTATTTTGAGATGTGATTTATCTCTTATTATTTCT GAATTTGAAATGGATATTCTGGAAGATGTTTTTAGAATAAACAGAGATTTACTTTTTTATCTTCCTTTTTTAGTTGATAA AATGTCTGATAATGATCTTTTAAAATTACCTTCATTTGAAGATCGGAAAAATTTTGTTTTCATTGGCAATTTTCTTCATG AACCGAATTGGAATACAGTTCAGTATTTAAAAGAAGCAATCTGGCCTTTAATCAAGAAAGATTTTCCGGAAGCTGTTTTG GAGGTTTACGGTGCTTATCCGTCGCAAAAAGTATTACAATTGCATCAGCCAAAAAATGGATTTTTTATTATGGGAAGGGC AGAAGATGCAAATGAAGTAGTGAAAAAGGCTCGGGTTGTTCTGGCGCCAATTCGTTTTGGGGCAGGTTTAAAAGGGAAAT TGTTAGAAGCGATGCAGTGCGGAACTCCAAGTGTAACCACAACAATTGGTTCTGAAGCTATGCATGGTGTTTTGCCTTGG AATGGAATTGTTGAAAATGATCCAGAGCAGTTTTCAAAAAAAGCAATTGCACTTTATCAGGATGAAAATCTATGGAAAGA ATCTCAAAAAAATGGCGTTGTGATTATCAATGAATGTTATCAAAAAAGCAGTTATTCAGATAAATTAACGGCAATAGTAA ATTCTCTGCTGACAGATTCTAAAAGCCACCGCCTTCATAATTTTATGGGCAATTTATTGCAGCATCATGCTTATAAAAGT ACAATGTATATGTCTAAATGGATCGAAGCTAAAAACAAAAGCTAA
Upstream 100 bases:
>100_bases TTTATTCCTGCAAAATTAGTGTTTTTTATTACTAAAAATCAGGAAATGCCGCGGGATTGCGCCGAAAAAAGCATTATTTT GTAAGTTGAAATAAATTACA
Downstream 100 bases:
>100_bases AAAAAACCGATTACAAAGTAATCGGTTTTTTTTAGCTTTTGTTTTAGTCACAGTATTCAGTCACAGTGAACAGTTAGATG TGGTCTTAGGGCTGAGAACT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Sugar Transferase; Glycosyl Transferase Protein; Glycosyltransferase-Like Protein; Methyltransferase And Glycosyltransferase; Polysaccharide Biosynthesis Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MNQIKKLLIIGFVWPEPNSSAAGGRMMQLISIFKENGFEITFASAALDSDFMVDLSEFGIEKKSIELNSASFDDFIAALN PNVVLFDRFMIEEQFGWRVTEKCPNAIRILDTEDLHCLRTARQKAFKENRKFEIHDLFSEEVAKREIASILRCDLSLIIS EFEMDILEDVFRINRDLLFYLPFLVDKMSDNDLLKLPSFEDRKNFVFIGNFLHEPNWNTVQYLKEAIWPLIKKDFPEAVL EVYGAYPSQKVLQLHQPKNGFFIMGRAEDANEVVKKARVVLAPIRFGAGLKGKLLEAMQCGTPSVTTTIGSEAMHGVLPW NGIVENDPEQFSKKAIALYQDENLWKESQKNGVVIINECYQKSSYSDKLTAIVNSLLTDSKSHRLHNFMGNLLQHHAYKS TMYMSKWIEAKNKS
Sequences:
>Translated_414_residues MNQIKKLLIIGFVWPEPNSSAAGGRMMQLISIFKENGFEITFASAALDSDFMVDLSEFGIEKKSIELNSASFDDFIAALN PNVVLFDRFMIEEQFGWRVTEKCPNAIRILDTEDLHCLRTARQKAFKENRKFEIHDLFSEEVAKREIASILRCDLSLIIS EFEMDILEDVFRINRDLLFYLPFLVDKMSDNDLLKLPSFEDRKNFVFIGNFLHEPNWNTVQYLKEAIWPLIKKDFPEAVL EVYGAYPSQKVLQLHQPKNGFFIMGRAEDANEVVKKARVVLAPIRFGAGLKGKLLEAMQCGTPSVTTTIGSEAMHGVLPW NGIVENDPEQFSKKAIALYQDENLWKESQKNGVVIINECYQKSSYSDKLTAIVNSLLTDSKSHRLHNFMGNLLQHHAYKS TMYMSKWIEAKNKS >Mature_414_residues MNQIKKLLIIGFVWPEPNSSAAGGRMMQLISIFKENGFEITFASAALDSDFMVDLSEFGIEKKSIELNSASFDDFIAALN PNVVLFDRFMIEEQFGWRVTEKCPNAIRILDTEDLHCLRTARQKAFKENRKFEIHDLFSEEVAKREIASILRCDLSLIIS EFEMDILEDVFRINRDLLFYLPFLVDKMSDNDLLKLPSFEDRKNFVFIGNFLHEPNWNTVQYLKEAIWPLIKKDFPEAVL EVYGAYPSQKVLQLHQPKNGFFIMGRAEDANEVVKKARVVLAPIRFGAGLKGKLLEAMQCGTPSVTTTIGSEAMHGVLPW NGIVENDPEQFSKKAIALYQDENLWKESQKNGVVIINECYQKSSYSDKLTAIVNSLLTDSKSHRLHNFMGNLLQHHAYKS TMYMSKWIEAKNKS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47460; Mature: 47460
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIKKLLIIGFVWPEPNSSAAGGRMMQLISIFKENGFEITFASAALDSDFMVDLSEFGI CCCHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCHHEEEHHHCCC EKKSIELNSASFDDFIAALNPNVVLFDRFMIEEQFGWRVTEKCPNAIRILDTEDLHCLRT CHHEEEECCCCHHHHHHHCCCCEEEEEHHHHHHHCCCEEHHHCCCCEEEECCCCHHHHHH ARQKAFKENRKFEIHDLFSEEVAKREIASILRCDLSLIISEFEMDILEDVFRINRDLLFY HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LPFLVDKMSDNDLLKLPSFEDRKNFVFIGNFLHEPNWNTVQYLKEAIWPLIKKDFPEAVL HHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH EVYGAYPSQKVLQLHQPKNGFFIMGRAEDANEVVKKARVVLAPIRFGAGLKGKLLEAMQC HHHCCCCCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHEEEEHHHCCCCCHHHHHHHHC GTPSVTTTIGSEAMHGVLPWNGIVENDPEQFSKKAIALYQDENLWKESQKNGVVIINECY CCCCCEEHHCHHHHHCCCCCCCCCCCCHHHHHHHHEEEEECCHHHHHCCCCCEEEEEHHH QKSSYSDKLTAIVNSLLTDSKSHRLHNFMGNLLQHHAYKSTMYMSKWIEAKNKS CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNQIKKLLIIGFVWPEPNSSAAGGRMMQLISIFKENGFEITFASAALDSDFMVDLSEFGI CCCHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCHHEEEHHHCCC EKKSIELNSASFDDFIAALNPNVVLFDRFMIEEQFGWRVTEKCPNAIRILDTEDLHCLRT CHHEEEECCCCHHHHHHHCCCCEEEEEHHHHHHHCCCEEHHHCCCCEEEECCCCHHHHHH ARQKAFKENRKFEIHDLFSEEVAKREIASILRCDLSLIISEFEMDILEDVFRINRDLLFY HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LPFLVDKMSDNDLLKLPSFEDRKNFVFIGNFLHEPNWNTVQYLKEAIWPLIKKDFPEAVL HHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH EVYGAYPSQKVLQLHQPKNGFFIMGRAEDANEVVKKARVVLAPIRFGAGLKGKLLEAMQC HHHCCCCCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHEEEEHHHCCCCCHHHHHHHHC GTPSVTTTIGSEAMHGVLPWNGIVENDPEQFSKKAIALYQDENLWKESQKNGVVIINECY CCCCCEEHHCHHHHHCCCCCCCCCCCCHHHHHHHHEEEEECCHHHHHCCCCCEEEEEHHH QKSSYSDKLTAIVNSLLTDSKSHRLHNFMGNLLQHHAYKSTMYMSKWIEAKNKS CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA