| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299317
Identifier: 146299317
GI number: 146299317
Start: 1801260
End: 1802951
Strand: Direct
Name: 146299317
Synonym: Fjoh_1557
Alternate gene names: NA
Gene position: 1801260-1802951 (Clockwise)
Preceding gene: 146299310
Following gene: 146299318
Centisome position: 29.54
GC content: 36.82
Gene sequence:
>1692_bases ATGAGTATGAAAGTAAACAAAATTGTAGTCTTGCAATTAATGATGTCAATGGTATTGATGTTGGGCACGGCTAGTTGTAG CAAAAAATCGAGTTCGAGTCACGCTTCAAGAGCAACTGGCTGGGATGTAGATAGTCAGAATGGAACAGCTGCTAGAAATG CTGGGAAAAAACAACAGGCTGGACCTGGATTAGTTTTTGTTGAAGGAGGTACGTTTACTATGGGTAAAGTACAGGATGAT GTTATGCACGATTGGAATAACACACCAACTCAACAACACGTTCAATCATTCTACATGGATGAAACCGAAGTTACTAATGG TATGTACTTGGAATACCTAGAGTGGTTAAAGAAAGTTTTCCCACCAACAGAAGAAAATTACAAAAATATTTACGAAGGAG CATCTCCTGATACTTTAGTATGGAGAAATCGTTTAGGCTATAACGAAACGATGACTAACAACTATTTAAGACACCCATCT TATGCTAACTATCCTGTAGTTGGTGTTAACTGGATTCAAGCTGTTGAATTTAGTAAATGGAGAACAGACCGTGTAAACGA GGCTGTTTTAGAGAAAAATGGTTATCTTAAAAAAGGTGCTAAAACAAATGATGTAACTGCTGAAAGTTTATTTAACACTG AAGCTTACGTTGCATCTCCATCTACAACTTATGGTGGAAATGAAGAATTAGTATTAAAGAAAAACCCTAACGGAAGAAGA CCAAAAGCTGGAAAAGACGGTGTTGTTCCTGAAGAGAAAAACGTATATGCACAACGTTCTTCTGGTATCATTTTACCAGA ATACAGACTTCCTACTGAAGCAGAATGGGAATATGCAGCAGCAGCTGATGTTGGACAAAGAGAATACAATATTTACAAAG GACAAAAGAAATATCCTTGGTCTGGAGATTACACTCGTTCTAACAAACGTAAAAACAGAGGTGATCAATTGGCTAACTTT AAACAAGGAAACGGTGATTACGGTGGAATTGCAGGTTGGTCTGATGACGGAGCTGATATCACAAATGCTGTGAAAAGTTA TGCAGCTAATGATTTCGGTTTATACGACATGGCTGGTAACGTTGCAGAATGGGTTGCCGATGTTTACAGACCTATTATTG ATAACGAAGCAAATGATTTCAACTACTACAGAGGTAACCAATATGCTAAAAACAAAATTGGTAAAGACGGTAAAATTGAA ATCGTTTCTACAGCAACTATTAAGTATGACACTTTAAGTAATGGTAAAGTTGTTGCAAGAAACCTTCCTGGAGAAATTGC TCAGGTTCCGGTTGATGAGCAAGAAACTTACTTAAGAACAAACTTCAGTACAAGTGATAATATCAACTACAGAGATGGTG ATAAACAATCTTCAAGATATTTTGACTTTGGAGATTCTGAGTCAGGATCAAAAGCTGATCAGGCAATGTACAACTCTCCT AAGCACAATATCACTACTGATAGTTTAGGTAAAATGATTAGAAAATATGATAACTCTAGTAAACGTACAACTTTAATCGA TGATAAAGTAAGAGTTTACAAAGGAGGTTCTTGGAGAGACAGAGCTTACTGGTTAGATCCAGCTCAAAGAAGATACTTCC CTCAGGATATGGCAACTGATTACATAGGTTTCAGATGTGCAATGTCTAGAGTAGGTGCTAAAACTGAAAGAAGAAAATCA CCAAGAAATTAA
Upstream 100 bases:
>100_bases TTATTTTCTGGTAAAAAACAGCTAAATAAAATTATTAGAACAGATGTTGCTAATTAAATGTTAATTATTATATTGCAGCA CCTAAATTTATCACCTAAGA
Downstream 100 bases:
>100_bases GATAAAGAAAATTTCATAAAAAATTCCAAATTCCAAAGCTGCATTTTCAGTTCGGAATTTGGAATTTTTTTATTGCTTTT TTCTACTTTTATAGTCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Gliding Motility Protein GldK; Gliding Motility-Related Protein; Gliding Motility Protein GldJ; Gliding Motility-Associated Lipoprotein GldK; Gliding Motility-Associated Lipoprotein Gldj; Protein Involved In Gliding Motility Gldj; Non-Specific Serine/Threonine Protein Kinase; Protein Involved In Gliding Motility Gldk; Conserved Domain Protein; Gliding Motility-Associated Lipoprotein Gldk; Gliding Motility-Associated Lipoprotein GldJ; Protein Involved In Gliding Motility GldJ; Gliding Motility Lipoprotein GldJ
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MSMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQAGPGLVFVEGGTFTMGKVQDD VMHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVFPPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPS YANYPVVGVNWIQAVEFSKWRTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRR PKAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPWSGDYTRSNKRKNRGDQLANF KQGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGNVAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIE IVSTATIKYDTLSNGKVVARNLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSP KHNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATDYIGFRCAMSRVGAKTERRKS PRN
Sequences:
>Translated_563_residues MSMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQAGPGLVFVEGGTFTMGKVQDD VMHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVFPPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPS YANYPVVGVNWIQAVEFSKWRTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRR PKAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPWSGDYTRSNKRKNRGDQLANF KQGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGNVAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIE IVSTATIKYDTLSNGKVVARNLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSP KHNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATDYIGFRCAMSRVGAKTERRKS PRN >Mature_562_residues SMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQAGPGLVFVEGGTFTMGKVQDDV MHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVFPPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPSY ANYPVVGVNWIQAVEFSKWRTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRRP KAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPWSGDYTRSNKRKNRGDQLANFK QGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGNVAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIEI VSTATIKYDTLSNGKVVARNLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSPK HNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATDYIGFRCAMSRVGAKTERRKSP RN
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63573; Mature: 63442
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQA CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC GPGLVFVEGGTFTMGKVQDDVMHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVF CCCEEEECCCEEEECCCCHHHHHCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHC PPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPSYANYPVVGVNWIQAVEFSKW CCCHHHHHHHHCCCCCCEEEEHHCCCCCHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHH RTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRR HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCC PKAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPW CCCCCCCCCCCCCCHHEECCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHEECCCCCCCC SGDYTRSNKRKNRGDQLANFKQGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGN CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCC VAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIEIVSTATIKYDTLSNGKVVAR HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEE NLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSP CCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHCCC KHNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATD CCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCEEECCHHHHHCCCHHHHHH YIGFRCAMSRVGAKTERRKSPRN HHHHHHHHHHHCCHHHHHCCCCC >Mature Secondary Structure SMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC GPGLVFVEGGTFTMGKVQDDVMHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVF CCCEEEECCCEEEECCCCHHHHHCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHC PPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPSYANYPVVGVNWIQAVEFSKW CCCHHHHHHHHCCCCCCEEEEHHCCCCCHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHH RTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRR HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCC PKAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPW CCCCCCCCCCCCCCHHEECCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHEECCCCCCCC SGDYTRSNKRKNRGDQLANFKQGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGN CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCC VAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIEIVSTATIKYDTLSNGKVVAR HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEE NLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSP CCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHCCC KHNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATD CCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCEEECCHHHHHCCCHHHHHH YIGFRCAMSRVGAKTERRKSPRN HHHHHHHHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA