Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299317

Identifier: 146299317

GI number: 146299317

Start: 1801260

End: 1802951

Strand: Direct

Name: 146299317

Synonym: Fjoh_1557

Alternate gene names: NA

Gene position: 1801260-1802951 (Clockwise)

Preceding gene: 146299310

Following gene: 146299318

Centisome position: 29.54

GC content: 36.82

Gene sequence:

>1692_bases
ATGAGTATGAAAGTAAACAAAATTGTAGTCTTGCAATTAATGATGTCAATGGTATTGATGTTGGGCACGGCTAGTTGTAG
CAAAAAATCGAGTTCGAGTCACGCTTCAAGAGCAACTGGCTGGGATGTAGATAGTCAGAATGGAACAGCTGCTAGAAATG
CTGGGAAAAAACAACAGGCTGGACCTGGATTAGTTTTTGTTGAAGGAGGTACGTTTACTATGGGTAAAGTACAGGATGAT
GTTATGCACGATTGGAATAACACACCAACTCAACAACACGTTCAATCATTCTACATGGATGAAACCGAAGTTACTAATGG
TATGTACTTGGAATACCTAGAGTGGTTAAAGAAAGTTTTCCCACCAACAGAAGAAAATTACAAAAATATTTACGAAGGAG
CATCTCCTGATACTTTAGTATGGAGAAATCGTTTAGGCTATAACGAAACGATGACTAACAACTATTTAAGACACCCATCT
TATGCTAACTATCCTGTAGTTGGTGTTAACTGGATTCAAGCTGTTGAATTTAGTAAATGGAGAACAGACCGTGTAAACGA
GGCTGTTTTAGAGAAAAATGGTTATCTTAAAAAAGGTGCTAAAACAAATGATGTAACTGCTGAAAGTTTATTTAACACTG
AAGCTTACGTTGCATCTCCATCTACAACTTATGGTGGAAATGAAGAATTAGTATTAAAGAAAAACCCTAACGGAAGAAGA
CCAAAAGCTGGAAAAGACGGTGTTGTTCCTGAAGAGAAAAACGTATATGCACAACGTTCTTCTGGTATCATTTTACCAGA
ATACAGACTTCCTACTGAAGCAGAATGGGAATATGCAGCAGCAGCTGATGTTGGACAAAGAGAATACAATATTTACAAAG
GACAAAAGAAATATCCTTGGTCTGGAGATTACACTCGTTCTAACAAACGTAAAAACAGAGGTGATCAATTGGCTAACTTT
AAACAAGGAAACGGTGATTACGGTGGAATTGCAGGTTGGTCTGATGACGGAGCTGATATCACAAATGCTGTGAAAAGTTA
TGCAGCTAATGATTTCGGTTTATACGACATGGCTGGTAACGTTGCAGAATGGGTTGCCGATGTTTACAGACCTATTATTG
ATAACGAAGCAAATGATTTCAACTACTACAGAGGTAACCAATATGCTAAAAACAAAATTGGTAAAGACGGTAAAATTGAA
ATCGTTTCTACAGCAACTATTAAGTATGACACTTTAAGTAATGGTAAAGTTGTTGCAAGAAACCTTCCTGGAGAAATTGC
TCAGGTTCCGGTTGATGAGCAAGAAACTTACTTAAGAACAAACTTCAGTACAAGTGATAATATCAACTACAGAGATGGTG
ATAAACAATCTTCAAGATATTTTGACTTTGGAGATTCTGAGTCAGGATCAAAAGCTGATCAGGCAATGTACAACTCTCCT
AAGCACAATATCACTACTGATAGTTTAGGTAAAATGATTAGAAAATATGATAACTCTAGTAAACGTACAACTTTAATCGA
TGATAAAGTAAGAGTTTACAAAGGAGGTTCTTGGAGAGACAGAGCTTACTGGTTAGATCCAGCTCAAAGAAGATACTTCC
CTCAGGATATGGCAACTGATTACATAGGTTTCAGATGTGCAATGTCTAGAGTAGGTGCTAAAACTGAAAGAAGAAAATCA
CCAAGAAATTAA

Upstream 100 bases:

>100_bases
TTATTTTCTGGTAAAAAACAGCTAAATAAAATTATTAGAACAGATGTTGCTAATTAAATGTTAATTATTATATTGCAGCA
CCTAAATTTATCACCTAAGA

Downstream 100 bases:

>100_bases
GATAAAGAAAATTTCATAAAAAATTCCAAATTCCAAAGCTGCATTTTCAGTTCGGAATTTGGAATTTTTTTATTGCTTTT
TTCTACTTTTATAGTCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: Gliding Motility Protein GldK; Gliding Motility-Related Protein; Gliding Motility Protein GldJ; Gliding Motility-Associated Lipoprotein GldK; Gliding Motility-Associated Lipoprotein Gldj; Protein Involved In Gliding Motility Gldj; Non-Specific Serine/Threonine Protein Kinase; Protein Involved In Gliding Motility Gldk; Conserved Domain Protein; Gliding Motility-Associated Lipoprotein Gldk; Gliding Motility-Associated Lipoprotein GldJ; Protein Involved In Gliding Motility GldJ; Gliding Motility Lipoprotein GldJ

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MSMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQAGPGLVFVEGGTFTMGKVQDD
VMHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVFPPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPS
YANYPVVGVNWIQAVEFSKWRTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRR
PKAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPWSGDYTRSNKRKNRGDQLANF
KQGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGNVAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIE
IVSTATIKYDTLSNGKVVARNLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSP
KHNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATDYIGFRCAMSRVGAKTERRKS
PRN

Sequences:

>Translated_563_residues
MSMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQAGPGLVFVEGGTFTMGKVQDD
VMHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVFPPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPS
YANYPVVGVNWIQAVEFSKWRTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRR
PKAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPWSGDYTRSNKRKNRGDQLANF
KQGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGNVAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIE
IVSTATIKYDTLSNGKVVARNLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSP
KHNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATDYIGFRCAMSRVGAKTERRKS
PRN
>Mature_562_residues
SMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQAGPGLVFVEGGTFTMGKVQDDV
MHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVFPPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPSY
ANYPVVGVNWIQAVEFSKWRTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRRP
KAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPWSGDYTRSNKRKNRGDQLANFK
QGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGNVAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIEI
VSTATIKYDTLSNGKVVARNLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSPK
HNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATDYIGFRCAMSRVGAKTERRKSP
RN

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63573; Mature: 63442

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
GPGLVFVEGGTFTMGKVQDDVMHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVF
CCCEEEECCCEEEECCCCHHHHHCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHC
PPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPSYANYPVVGVNWIQAVEFSKW
CCCHHHHHHHHCCCCCCEEEEHHCCCCCHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHH
RTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRR
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCC
PKAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPW
CCCCCCCCCCCCCCHHEECCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHEECCCCCCCC
SGDYTRSNKRKNRGDQLANFKQGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGN
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCC
VAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIEIVSTATIKYDTLSNGKVVAR
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEE
NLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSP
CCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHCCC
KHNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATD
CCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCEEECCHHHHHCCCHHHHHH
YIGFRCAMSRVGAKTERRKSPRN
HHHHHHHHHHHCCHHHHHCCCCC
>Mature Secondary Structure 
SMKVNKIVVLQLMMSMVLMLGTASCSKKSSSSHASRATGWDVDSQNGTAARNAGKKQQA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
GPGLVFVEGGTFTMGKVQDDVMHDWNNTPTQQHVQSFYMDETEVTNGMYLEYLEWLKKVF
CCCEEEECCCEEEECCCCHHHHHCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHC
PPTEENYKNIYEGASPDTLVWRNRLGYNETMTNNYLRHPSYANYPVVGVNWIQAVEFSKW
CCCHHHHHHHHCCCCCCEEEEHHCCCCCHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHH
RTDRVNEAVLEKNGYLKKGAKTNDVTAESLFNTEAYVASPSTTYGGNEELVLKKNPNGRR
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCC
PKAGKDGVVPEEKNVYAQRSSGIILPEYRLPTEAEWEYAAAADVGQREYNIYKGQKKYPW
CCCCCCCCCCCCCCHHEECCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHEECCCCCCCC
SGDYTRSNKRKNRGDQLANFKQGNGDYGGIAGWSDDGADITNAVKSYAANDFGLYDMAGN
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCC
VAEWVADVYRPIIDNEANDFNYYRGNQYAKNKIGKDGKIEIVSTATIKYDTLSNGKVVAR
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEE
NLPGEIAQVPVDEQETYLRTNFSTSDNINYRDGDKQSSRYFDFGDSESGSKADQAMYNSP
CCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHCCC
KHNITTDSLGKMIRKYDNSSKRTTLIDDKVRVYKGGSWRDRAYWLDPAQRRYFPQDMATD
CCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCEEECCHHHHHCCCHHHHHH
YIGFRCAMSRVGAKTERRKSPRN
HHHHHHHHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA