| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299307
Identifier: 146299307
GI number: 146299307
Start: 1784456
End: 1785721
Strand: Direct
Name: 146299307
Synonym: Fjoh_1547
Alternate gene names: NA
Gene position: 1784456-1785721 (Clockwise)
Preceding gene: 146299306
Following gene: 146299310
Centisome position: 29.27
GC content: 32.94
Gene sequence:
>1266_bases GTGTACGGAAAAACAGTATCAGACAGTATTGCAAATCACATAAGTTTATTAAACGATAAACAAAAAAGTATTTTATACGA GTTTGAAGTTTTAAAAAAGAATGGTTTTGATGCCGCTCCGTTTTGGCTCAAAAATAAAAACCAGTTTCCTCAATTCAATG AAAATGTAAGAGATGAGTTAGCAAAGCAGATTTTTGCAAACTCTCATGTAATATATTCCCCGCCAAAAGATTCTGCAATT CAATTCTGGATGCAGACACAGTTACTTACCAATTGGATGTTTTATTTATCGGCGTTTATTGCTGTTTGCGCCCTTATTGC TTTATTTAAACGATATTGGGGTATGCTCATTCAGTTTTTAATTAATCGTCTGGCGCCTTTATTAAAATTTTTGTTTTCTC CGGTTTTGTTAACCTACGAATTGCTGTTAATTGGTGCGGCCTGTGTATTTTATGGCTGTGTAATCGATGAGTTTGTAATG AGAACCGTAATTATTCATTTGGGACTGTTTTTATTATGGAGCCAGTCGACAGCTGTATTTACTAAAGAATACTGGGTTAA AAAGTATGTTTATGAAATAGAAAATAACTTTTGGGGATCTGATCCGTGGGAAACAGTAAAAACAATCAGTTTTCCTGCTG TTATCGTTACGCTTGCTCTTTTTTATGTATTGTATAAAGTTCCAGAAGATATTTTCTACAACTATGAAATAGTTCTTTCT GGCATTGCGGCGATTTATGCCTTGCCTTTTTGGCGTTCTTTAGAGAAATATATTTATCCTGTTTTATTTCCGTTTGTCAA AGATGATAATAGAGACCGAAGTATCAATTCATTAGGAGCTTGTACGGTTATAGCTCTTATTGCTTTCATTGCGCTTGCCT GGCAGTTTAATCCTGTTTTTAACAATATAATATCGGCATTGGTAAGTTTATTAATGTTGTCGTTCCTGATTTTATCTTGT AGAATAAATCATAAATACAGTTATAGAAATTATTACTATATGCAGTTTGTAACTGTTGTTTTTCTTCTGTCGGTTTTGAT TTATAGTTATTCTTTCCGCTTAAATGAAATTATCTGGTTTTCATTAATAGGAGGCAGTATATTTATTATAATAAAATATA TGGAGATCTTTTCGTTTTTCTCTGATTGGAAAAGAGGAAAAGCCTGGGCTTGGAAATTAATGGGGCTTGCCGGGTTATTA TGGCTTTTGGGTAAAGGTATATTATATGCTTCTCAAATATTATTTATCGTAACTCCGGCATTCTAA
Upstream 100 bases:
>100_bases TTTATACTTTTAAAACTTACATTTGCTAAGAAAGGTTTGTCTCTTTAAATTAAAAAAGTTGAAAAAAATAGTAGTATTTA TACTCTTGTCCTGTTTTAGC
Downstream 100 bases:
>100_bases AAAGAAAAAACCTTTGTCGAGTTTAAACTTCGACAAAGGTTTAGAAAGATTTTTTTGTGCTAAAAATATCTAATTTTCAG TATCTTTTGTTTCTTCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MYGKTVSDSIANHISLLNDKQKSILYEFEVLKKNGFDAAPFWLKNKNQFPQFNENVRDELAKQIFANSHVIYSPPKDSAI QFWMQTQLLTNWMFYLSAFIAVCALIALFKRYWGMLIQFLINRLAPLLKFLFSPVLLTYELLLIGAACVFYGCVIDEFVM RTVIIHLGLFLLWSQSTAVFTKEYWVKKYVYEIENNFWGSDPWETVKTISFPAVIVTLALFYVLYKVPEDIFYNYEIVLS GIAAIYALPFWRSLEKYIYPVLFPFVKDDNRDRSINSLGACTVIALIAFIALAWQFNPVFNNIISALVSLLMLSFLILSC RINHKYSYRNYYYMQFVTVVFLLSVLIYSYSFRLNEIIWFSLIGGSIFIIIKYMEIFSFFSDWKRGKAWAWKLMGLAGLL WLLGKGILYASQILFIVTPAF
Sequences:
>Translated_421_residues MYGKTVSDSIANHISLLNDKQKSILYEFEVLKKNGFDAAPFWLKNKNQFPQFNENVRDELAKQIFANSHVIYSPPKDSAI QFWMQTQLLTNWMFYLSAFIAVCALIALFKRYWGMLIQFLINRLAPLLKFLFSPVLLTYELLLIGAACVFYGCVIDEFVM RTVIIHLGLFLLWSQSTAVFTKEYWVKKYVYEIENNFWGSDPWETVKTISFPAVIVTLALFYVLYKVPEDIFYNYEIVLS GIAAIYALPFWRSLEKYIYPVLFPFVKDDNRDRSINSLGACTVIALIAFIALAWQFNPVFNNIISALVSLLMLSFLILSC RINHKYSYRNYYYMQFVTVVFLLSVLIYSYSFRLNEIIWFSLIGGSIFIIIKYMEIFSFFSDWKRGKAWAWKLMGLAGLL WLLGKGILYASQILFIVTPAF >Mature_421_residues MYGKTVSDSIANHISLLNDKQKSILYEFEVLKKNGFDAAPFWLKNKNQFPQFNENVRDELAKQIFANSHVIYSPPKDSAI QFWMQTQLLTNWMFYLSAFIAVCALIALFKRYWGMLIQFLINRLAPLLKFLFSPVLLTYELLLIGAACVFYGCVIDEFVM RTVIIHLGLFLLWSQSTAVFTKEYWVKKYVYEIENNFWGSDPWETVKTISFPAVIVTLALFYVLYKVPEDIFYNYEIVLS GIAAIYALPFWRSLEKYIYPVLFPFVKDDNRDRSINSLGACTVIALIAFIALAWQFNPVFNNIISALVSLLMLSFLILSC RINHKYSYRNYYYMQFVTVVFLLSVLIYSYSFRLNEIIWFSLIGGSIFIIIKYMEIFSFFSDWKRGKAWAWKLMGLAGLL WLLGKGILYASQILFIVTPAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49121; Mature: 49121
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGKTVSDSIANHISLLNDKQKSILYEFEVLKKNGFDAAPFWLKNKNQFPQFNENVRDEL CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHH AKQIFANSHVIYSPPKDSAIQFWMQTQLLTNWMFYLSAFIAVCALIALFKRYWGMLIQFL HHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INRLAPLLKFLFSPVLLTYELLLIGAACVFYGCVIDEFVMRTVIIHLGLFLLWSQSTAVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TKEYWVKKYVYEIENNFWGSDPWETVKTISFPAVIVTLALFYVLYKVPEDIFYNYEIVLS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GIAAIYALPFWRSLEKYIYPVLFPFVKDDNRDRSINSLGACTVIALIAFIALAWQFNPVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH NNIISALVSLLMLSFLILSCRINHKYSYRNYYYMQFVTVVFLLSVLIYSYSFRLNEIIWF HHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIGGSIFIIIKYMEIFSFFSDWKRGKAWAWKLMGLAGLLWLLGKGILYASQILFIVTPA HHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECC F C >Mature Secondary Structure MYGKTVSDSIANHISLLNDKQKSILYEFEVLKKNGFDAAPFWLKNKNQFPQFNENVRDEL CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHH AKQIFANSHVIYSPPKDSAIQFWMQTQLLTNWMFYLSAFIAVCALIALFKRYWGMLIQFL HHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INRLAPLLKFLFSPVLLTYELLLIGAACVFYGCVIDEFVMRTVIIHLGLFLLWSQSTAVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TKEYWVKKYVYEIENNFWGSDPWETVKTISFPAVIVTLALFYVLYKVPEDIFYNYEIVLS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GIAAIYALPFWRSLEKYIYPVLFPFVKDDNRDRSINSLGACTVIALIAFIALAWQFNPVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH NNIISALVSLLMLSFLILSCRINHKYSYRNYYYMQFVTVVFLLSVLIYSYSFRLNEIIWF HHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIGGSIFIIIKYMEIFSFFSDWKRGKAWAWKLMGLAGLLWLLGKGILYASQILFIVTPA HHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA