Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299307

Identifier: 146299307

GI number: 146299307

Start: 1784456

End: 1785721

Strand: Direct

Name: 146299307

Synonym: Fjoh_1547

Alternate gene names: NA

Gene position: 1784456-1785721 (Clockwise)

Preceding gene: 146299306

Following gene: 146299310

Centisome position: 29.27

GC content: 32.94

Gene sequence:

>1266_bases
GTGTACGGAAAAACAGTATCAGACAGTATTGCAAATCACATAAGTTTATTAAACGATAAACAAAAAAGTATTTTATACGA
GTTTGAAGTTTTAAAAAAGAATGGTTTTGATGCCGCTCCGTTTTGGCTCAAAAATAAAAACCAGTTTCCTCAATTCAATG
AAAATGTAAGAGATGAGTTAGCAAAGCAGATTTTTGCAAACTCTCATGTAATATATTCCCCGCCAAAAGATTCTGCAATT
CAATTCTGGATGCAGACACAGTTACTTACCAATTGGATGTTTTATTTATCGGCGTTTATTGCTGTTTGCGCCCTTATTGC
TTTATTTAAACGATATTGGGGTATGCTCATTCAGTTTTTAATTAATCGTCTGGCGCCTTTATTAAAATTTTTGTTTTCTC
CGGTTTTGTTAACCTACGAATTGCTGTTAATTGGTGCGGCCTGTGTATTTTATGGCTGTGTAATCGATGAGTTTGTAATG
AGAACCGTAATTATTCATTTGGGACTGTTTTTATTATGGAGCCAGTCGACAGCTGTATTTACTAAAGAATACTGGGTTAA
AAAGTATGTTTATGAAATAGAAAATAACTTTTGGGGATCTGATCCGTGGGAAACAGTAAAAACAATCAGTTTTCCTGCTG
TTATCGTTACGCTTGCTCTTTTTTATGTATTGTATAAAGTTCCAGAAGATATTTTCTACAACTATGAAATAGTTCTTTCT
GGCATTGCGGCGATTTATGCCTTGCCTTTTTGGCGTTCTTTAGAGAAATATATTTATCCTGTTTTATTTCCGTTTGTCAA
AGATGATAATAGAGACCGAAGTATCAATTCATTAGGAGCTTGTACGGTTATAGCTCTTATTGCTTTCATTGCGCTTGCCT
GGCAGTTTAATCCTGTTTTTAACAATATAATATCGGCATTGGTAAGTTTATTAATGTTGTCGTTCCTGATTTTATCTTGT
AGAATAAATCATAAATACAGTTATAGAAATTATTACTATATGCAGTTTGTAACTGTTGTTTTTCTTCTGTCGGTTTTGAT
TTATAGTTATTCTTTCCGCTTAAATGAAATTATCTGGTTTTCATTAATAGGAGGCAGTATATTTATTATAATAAAATATA
TGGAGATCTTTTCGTTTTTCTCTGATTGGAAAAGAGGAAAAGCCTGGGCTTGGAAATTAATGGGGCTTGCCGGGTTATTA
TGGCTTTTGGGTAAAGGTATATTATATGCTTCTCAAATATTATTTATCGTAACTCCGGCATTCTAA

Upstream 100 bases:

>100_bases
TTTATACTTTTAAAACTTACATTTGCTAAGAAAGGTTTGTCTCTTTAAATTAAAAAAGTTGAAAAAAATAGTAGTATTTA
TACTCTTGTCCTGTTTTAGC

Downstream 100 bases:

>100_bases
AAAGAAAAAACCTTTGTCGAGTTTAAACTTCGACAAAGGTTTAGAAAGATTTTTTTGTGCTAAAAATATCTAATTTTCAG
TATCTTTTGTTTCTTCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MYGKTVSDSIANHISLLNDKQKSILYEFEVLKKNGFDAAPFWLKNKNQFPQFNENVRDELAKQIFANSHVIYSPPKDSAI
QFWMQTQLLTNWMFYLSAFIAVCALIALFKRYWGMLIQFLINRLAPLLKFLFSPVLLTYELLLIGAACVFYGCVIDEFVM
RTVIIHLGLFLLWSQSTAVFTKEYWVKKYVYEIENNFWGSDPWETVKTISFPAVIVTLALFYVLYKVPEDIFYNYEIVLS
GIAAIYALPFWRSLEKYIYPVLFPFVKDDNRDRSINSLGACTVIALIAFIALAWQFNPVFNNIISALVSLLMLSFLILSC
RINHKYSYRNYYYMQFVTVVFLLSVLIYSYSFRLNEIIWFSLIGGSIFIIIKYMEIFSFFSDWKRGKAWAWKLMGLAGLL
WLLGKGILYASQILFIVTPAF

Sequences:

>Translated_421_residues
MYGKTVSDSIANHISLLNDKQKSILYEFEVLKKNGFDAAPFWLKNKNQFPQFNENVRDELAKQIFANSHVIYSPPKDSAI
QFWMQTQLLTNWMFYLSAFIAVCALIALFKRYWGMLIQFLINRLAPLLKFLFSPVLLTYELLLIGAACVFYGCVIDEFVM
RTVIIHLGLFLLWSQSTAVFTKEYWVKKYVYEIENNFWGSDPWETVKTISFPAVIVTLALFYVLYKVPEDIFYNYEIVLS
GIAAIYALPFWRSLEKYIYPVLFPFVKDDNRDRSINSLGACTVIALIAFIALAWQFNPVFNNIISALVSLLMLSFLILSC
RINHKYSYRNYYYMQFVTVVFLLSVLIYSYSFRLNEIIWFSLIGGSIFIIIKYMEIFSFFSDWKRGKAWAWKLMGLAGLL
WLLGKGILYASQILFIVTPAF
>Mature_421_residues
MYGKTVSDSIANHISLLNDKQKSILYEFEVLKKNGFDAAPFWLKNKNQFPQFNENVRDELAKQIFANSHVIYSPPKDSAI
QFWMQTQLLTNWMFYLSAFIAVCALIALFKRYWGMLIQFLINRLAPLLKFLFSPVLLTYELLLIGAACVFYGCVIDEFVM
RTVIIHLGLFLLWSQSTAVFTKEYWVKKYVYEIENNFWGSDPWETVKTISFPAVIVTLALFYVLYKVPEDIFYNYEIVLS
GIAAIYALPFWRSLEKYIYPVLFPFVKDDNRDRSINSLGACTVIALIAFIALAWQFNPVFNNIISALVSLLMLSFLILSC
RINHKYSYRNYYYMQFVTVVFLLSVLIYSYSFRLNEIIWFSLIGGSIFIIIKYMEIFSFFSDWKRGKAWAWKLMGLAGLL
WLLGKGILYASQILFIVTPAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49121; Mature: 49121

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA