| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299246
Identifier: 146299246
GI number: 146299246
Start: 1704278
End: 1706542
Strand: Direct
Name: 146299246
Synonym: Fjoh_1486
Alternate gene names: NA
Gene position: 1704278-1706542 (Clockwise)
Preceding gene: 146299245
Following gene: 146299247
Centisome position: 27.95
GC content: 31.83
Gene sequence:
>2265_bases ATGCGCAATTTTATTTGGAGTTTATCACTCTTGTTTGCCGGAATGTCTGTTTTTTTCGCTCAAACAAAAGGTATCGAAAA AGGAACCTATTTATCTACAAATAAAGGAGAAAAAATAAAACTAAATTTATTAGACGATAATAAATACGAATTGGTTTTTT ATACCGGAGATTATGAAATTAAAGGCGATTCGCTGGTTTTTTCTAAAAAGGAAAAATCAGAAAACAGATTCGATCTTTCA TTTAAAAATGATAAAAAAGCCAAAAAGGTCAAAATTAAGTTCTTAAATCCTTCTTATTATTCATTTTATATAGGAACTCA AAAAGGTTCAGAAGCAATTCAATACCAAAGAGTTTCTGATATTAAAACAAAAGTAGATCCAAACTGGACATCAACAGATT TAGATTTTGAAATAGACAAAACAGATTTTCTGTATCTGGTTTATGAAGATTATGACGGAAAAAGTGATGTTAGTAAATAT GCATTGCCAAAAGATGTTTCAGAGGTAACAATTGATTATCAGCTGCAGCTTTTGGGCAGGATGAACATTGCCGGATTTTA TGATAGAAAAACAAACGAGCTGAAAGTTTCTGAAAGATCAGGGAAAGATCCTTTGGTTTTTATGAATGAAAAAGATGTAC AGCCGGCTAAAGCTCCAACAGTTGTTCCATTAGAAAATAATATAGTGACAAACTGGACTTATCCGGGCAAAAGCTCTTAT TATGACAGCTATGGAGGTGCAGCAACAGATAGTATATATAATGGTCTTGCGGTTGACAGTACAGCGGTACCTGCAGCAGA TTATACGATAGATACAGCGAGTTCTTACTCTCAGTACAATTTCAAACTAAAAATTGAAAGCAGTTTAAGCAAGGCATTAG CTGCTACAAAAGAAGCTGCCAGCAATAAGTTTTTAGTAGTTTATCATGACAGTAATAAAACAGCTAAAGAAACTTTTAAT GCTTTTGTAAAAGATCAGGAAACACAGACTGGCTATAATATGTATGACAAATATTATGAACAGTATGATATCTATAATTA TTATCTGGCTGGAGCCGATGATAAAAAATGGCTGAAAAACAATAAAATAACAAACGATCCAAGTGTTTTTGTTTTAAATA AAAATGGCGATGTACTGGCGCTTGCAAAATCAGATTTAACATCAAAACAATACCAATTTAGTTATTACGGAGATTTTTAC CGTAAACTATTGCGTGCAGATGCTTTCCTGGCTATTGATAAGACTTTGAAAAATAAAAAAGCGTCAGATACAGATTTAAT AAGCGCATTTAATAAGGCAGCTTTGCTGGAAGCACCTTATGATTATGATTCAGATTATACTGTAGATGATCCTAGTGAGT TTGTAATTTCAAAAACAGCATTAGATAAAAAAGAAGTTACTCAAACCTGGAAAAAATTGATTGAAGCACATCAAAAAGAT AAAAAACCCGATATGATTTTGGTAGAAACAATCATAAGAGAAATCAAAAATCAAGGATTTACAAAACAGCTTTTTAACGA AGACAAAATCTTAAACGATACAGATTTCCTTGCAATTGATTATCTACTAAAACATTCTGATGAAATCGAAAGCAATCGTG CAGCATTTAACAGCAATGCGCCAGAAATTCATAACATAGGTAATCCAGTTTCTGAAGTTTCTAATGCGTTGCAGACAAAT GTATATGCTTCTCAAGATGGAGTGACTGGAGATATGAATAAAGAGAAAATCAATTCTGTTTATAAAAAAATCATTGCTTC TGGAAAAGGAAATTTTGATGCCTACAGAAATTATTTTTATTACTTAGCCCAGATAGAAGATAACGACGGATCTAATATAA CGTACTTAAAAGAGTTTAATACTTATTTTGATAACACGTTAGCAGGATCAAGTCCAATTGAAAAATTAGACGCTATTTTT GAAGGATTAGATTCAAGCTCTAGTTATTCGTATGACGGATGGAATTCATTTAAATTATACCATTCAGATATTTGCAATAA TGCAGCCTGGACTGTTGTACAGAAACCGCAAAACTCAAACTTTATTAAAGATGCCATAAAATGGTCTGAATATAGTTTAG TAATATCTAAAAACAATCCATATTATTTAGATACACTTGCACAGTTGTATTACAAAGACGGACAAAAAGATAAAGCTGTT GCTACTCAGACTCTGGCAGTAAAATACTTAACCGATACTGTTGAAGAGGAAACTGCAAATGATATAAAAGAAGTTTTATC TAAAATGCAGAACGGAACATACTAA
Upstream 100 bases:
>100_bases TTTGTAGTATTTTGATTTCAAATATTATAGTTTTTTATGATTTGTTTAGGCAGGAATCAAATATCTTTGTGCTATATTAT TAACAACAAAAAATGTAGTT
Downstream 100 bases:
>100_bases AATCTTTTAAACACAATAAAAAAATCCAATGGCTAATAAGTCATTGGATTTTTTATTGTAGTATTTTAACTACAATATTA TGATTTTTTTGGCTTTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MRNFIWSLSLLFAGMSVFFAQTKGIEKGTYLSTNKGEKIKLNLLDDNKYELVFYTGDYEIKGDSLVFSKKEKSENRFDLS FKNDKKAKKVKIKFLNPSYYSFYIGTQKGSEAIQYQRVSDIKTKVDPNWTSTDLDFEIDKTDFLYLVYEDYDGKSDVSKY ALPKDVSEVTIDYQLQLLGRMNIAGFYDRKTNELKVSERSGKDPLVFMNEKDVQPAKAPTVVPLENNIVTNWTYPGKSSY YDSYGGAATDSIYNGLAVDSTAVPAADYTIDTASSYSQYNFKLKIESSLSKALAATKEAASNKFLVVYHDSNKTAKETFN AFVKDQETQTGYNMYDKYYEQYDIYNYYLAGADDKKWLKNNKITNDPSVFVLNKNGDVLALAKSDLTSKQYQFSYYGDFY RKLLRADAFLAIDKTLKNKKASDTDLISAFNKAALLEAPYDYDSDYTVDDPSEFVISKTALDKKEVTQTWKKLIEAHQKD KKPDMILVETIIREIKNQGFTKQLFNEDKILNDTDFLAIDYLLKHSDEIESNRAAFNSNAPEIHNIGNPVSEVSNALQTN VYASQDGVTGDMNKEKINSVYKKIIASGKGNFDAYRNYFYYLAQIEDNDGSNITYLKEFNTYFDNTLAGSSPIEKLDAIF EGLDSSSSYSYDGWNSFKLYHSDICNNAAWTVVQKPQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAV ATQTLAVKYLTDTVEEETANDIKEVLSKMQNGTY
Sequences:
>Translated_754_residues MRNFIWSLSLLFAGMSVFFAQTKGIEKGTYLSTNKGEKIKLNLLDDNKYELVFYTGDYEIKGDSLVFSKKEKSENRFDLS FKNDKKAKKVKIKFLNPSYYSFYIGTQKGSEAIQYQRVSDIKTKVDPNWTSTDLDFEIDKTDFLYLVYEDYDGKSDVSKY ALPKDVSEVTIDYQLQLLGRMNIAGFYDRKTNELKVSERSGKDPLVFMNEKDVQPAKAPTVVPLENNIVTNWTYPGKSSY YDSYGGAATDSIYNGLAVDSTAVPAADYTIDTASSYSQYNFKLKIESSLSKALAATKEAASNKFLVVYHDSNKTAKETFN AFVKDQETQTGYNMYDKYYEQYDIYNYYLAGADDKKWLKNNKITNDPSVFVLNKNGDVLALAKSDLTSKQYQFSYYGDFY RKLLRADAFLAIDKTLKNKKASDTDLISAFNKAALLEAPYDYDSDYTVDDPSEFVISKTALDKKEVTQTWKKLIEAHQKD KKPDMILVETIIREIKNQGFTKQLFNEDKILNDTDFLAIDYLLKHSDEIESNRAAFNSNAPEIHNIGNPVSEVSNALQTN VYASQDGVTGDMNKEKINSVYKKIIASGKGNFDAYRNYFYYLAQIEDNDGSNITYLKEFNTYFDNTLAGSSPIEKLDAIF EGLDSSSSYSYDGWNSFKLYHSDICNNAAWTVVQKPQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAV ATQTLAVKYLTDTVEEETANDIKEVLSKMQNGTY >Mature_754_residues MRNFIWSLSLLFAGMSVFFAQTKGIEKGTYLSTNKGEKIKLNLLDDNKYELVFYTGDYEIKGDSLVFSKKEKSENRFDLS FKNDKKAKKVKIKFLNPSYYSFYIGTQKGSEAIQYQRVSDIKTKVDPNWTSTDLDFEIDKTDFLYLVYEDYDGKSDVSKY ALPKDVSEVTIDYQLQLLGRMNIAGFYDRKTNELKVSERSGKDPLVFMNEKDVQPAKAPTVVPLENNIVTNWTYPGKSSY YDSYGGAATDSIYNGLAVDSTAVPAADYTIDTASSYSQYNFKLKIESSLSKALAATKEAASNKFLVVYHDSNKTAKETFN AFVKDQETQTGYNMYDKYYEQYDIYNYYLAGADDKKWLKNNKITNDPSVFVLNKNGDVLALAKSDLTSKQYQFSYYGDFY RKLLRADAFLAIDKTLKNKKASDTDLISAFNKAALLEAPYDYDSDYTVDDPSEFVISKTALDKKEVTQTWKKLIEAHQKD KKPDMILVETIIREIKNQGFTKQLFNEDKILNDTDFLAIDYLLKHSDEIESNRAAFNSNAPEIHNIGNPVSEVSNALQTN VYASQDGVTGDMNKEKINSVYKKIIASGKGNFDAYRNYFYYLAQIEDNDGSNITYLKEFNTYFDNTLAGSSPIEKLDAIF EGLDSSSSYSYDGWNSFKLYHSDICNNAAWTVVQKPQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAV ATQTLAVKYLTDTVEEETANDIKEVLSKMQNGTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85966; Mature: 85966
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNFIWSLSLLFAGMSVFFAQTKGIEKGTYLSTNKGEKIKLNLLDDNKYELVFYTGDYEI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCEEEEEEECCEEE KGDSLVFSKKEKSENRFDLSFKNDKKAKKVKIKFLNPSYYSFYIGTQKGSEAIQYQRVSD CCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHH IKTKVDPNWTSTDLDFEIDKTDFLYLVYEDYDGKSDVSKYALPKDVSEVTIDYQLQLLGR HHHCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCHHHHCCCCCHHHEEEEEEEEEEEC MNIAGFYDRKTNELKVSERSGKDPLVFMNEKDVQPAKAPTVVPLENNIVTNWTYPGKSSY CCCCEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCC YDSYGGAATDSIYNGLAVDSTAVPAADYTIDTASSYSQYNFKLKIESSLSKALAATKEAA CCCCCCCHHHHHHCCCEECCCCCCCCCEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHC SNKFLVVYHDSNKTAKETFNAFVKDQETQTGYNMYDKYYEQYDIYNYYLAGADDKKWLKN CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHC NKITNDPSVFVLNKNGDVLALAKSDLTSKQYQFSYYGDFYRKLLRADAFLAIDKTLKNKK CCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHEEEHHHHCCCC ASDTDLISAFNKAALLEAPYDYDSDYTVDDPSEFVISKTALDKKEVTQTWKKLIEAHQKD CCCHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHEEEHHHCCHHHHHHHHHHHHHHHHCC KKPDMILVETIIREIKNQGFTKQLFNEDKILNDTDFLAIDYLLKHSDEIESNRAAFNSNA CCCCEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHCCCHHCCCCCC PEIHNIGNPVSEVSNALQTNVYASQDGVTGDMNKEKINSVYKKIIASGKGNFDAYRNYFY CCHHCCCCHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCEEE YLAQIEDNDGSNITYLKEFNTYFDNTLAGSSPIEKLDAIFEGLDSSSSYSYDGWNSFKLY EEEEEECCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE HSDICNNAAWTVVQKPQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAV HHHHCCCCEEEEEECCCCCCHHHHHHCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCHHH ATQTLAVKYLTDTVEEETANDIKEVLSKMQNGTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRNFIWSLSLLFAGMSVFFAQTKGIEKGTYLSTNKGEKIKLNLLDDNKYELVFYTGDYEI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCEEEEEEECCEEE KGDSLVFSKKEKSENRFDLSFKNDKKAKKVKIKFLNPSYYSFYIGTQKGSEAIQYQRVSD CCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHH IKTKVDPNWTSTDLDFEIDKTDFLYLVYEDYDGKSDVSKYALPKDVSEVTIDYQLQLLGR HHHCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCHHHHCCCCCHHHEEEEEEEEEEEC MNIAGFYDRKTNELKVSERSGKDPLVFMNEKDVQPAKAPTVVPLENNIVTNWTYPGKSSY CCCCEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCC YDSYGGAATDSIYNGLAVDSTAVPAADYTIDTASSYSQYNFKLKIESSLSKALAATKEAA CCCCCCCHHHHHHCCCEECCCCCCCCCEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHC SNKFLVVYHDSNKTAKETFNAFVKDQETQTGYNMYDKYYEQYDIYNYYLAGADDKKWLKN CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHC NKITNDPSVFVLNKNGDVLALAKSDLTSKQYQFSYYGDFYRKLLRADAFLAIDKTLKNKK CCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHEEEHHHHCCCC ASDTDLISAFNKAALLEAPYDYDSDYTVDDPSEFVISKTALDKKEVTQTWKKLIEAHQKD CCCHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHEEEHHHCCHHHHHHHHHHHHHHHHCC KKPDMILVETIIREIKNQGFTKQLFNEDKILNDTDFLAIDYLLKHSDEIESNRAAFNSNA CCCCEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHCCCHHCCCCCC PEIHNIGNPVSEVSNALQTNVYASQDGVTGDMNKEKINSVYKKIIASGKGNFDAYRNYFY CCHHCCCCHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCEEE YLAQIEDNDGSNITYLKEFNTYFDNTLAGSSPIEKLDAIFEGLDSSSSYSYDGWNSFKLY EEEEEECCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE HSDICNNAAWTVVQKPQNSNFIKDAIKWSEYSLVISKNNPYYLDTLAQLYYKDGQKDKAV HHHHCCCCEEEEEECCCCCCHHHHHHCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCHHH ATQTLAVKYLTDTVEEETANDIKEVLSKMQNGTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA