| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299245
Identifier: 146299245
GI number: 146299245
Start: 1701497
End: 1704184
Strand: Direct
Name: 146299245
Synonym: Fjoh_1485
Alternate gene names: NA
Gene position: 1701497-1704184 (Clockwise)
Preceding gene: 146299244
Following gene: 146299246
Centisome position: 27.91
GC content: 33.67
Gene sequence:
>2688_bases ATGAATAAAACACTTTTTATTTTTGCCTTATTTTTTACTTCTATATGCTTTTCTCAAAGTGTTCGTTTTGATGGTTTTAT TCAGGATGAGCAGAAAAATCCGTTGGAAATGGCCAATATTATGGCGGTTAACAATACCACAAAAGCAATGGATTCTTATG GAATTACCAATGATAAAGGAAAATTTCAGCTCACTTTAAAGCCTAATACTTCTTACACGGTTAAAGTAAGCTATCTTGGA ATGAAGTCTAAAGAAATTGCCGTTTCGACCAAAACCGAAAACATTGCCCAGAATATTGTTATGGACGGCGCAGGAATAGA ACTCGAAGGTGTTGAGATTGTTCGTGAAATGCCGGTTTCTATAAAAGGCGACACGATTGTTTACAATGCCGATTCTTTTA AATCTGGAACCGAAAAAAAACTCGAAGATGTCCTGAAAAAACTTCCAGGCGTTGAGGTAAATGCCGATGGTGAAATTGAG GTTGAAGGAAAAAAAGTAAGTAAATTAATGGTAGAAGGAAAAGACTTTTTTGACGGCGATACCAAACTCGGAGTCAAAAA CATTCCTGCAGATGCTATTGATAAAGTTCAGGTTTTAAGAAACTATAACGAAATAAGCCAATTAAAAGGTCTCGAAAACG ATCAGGAAAATGTGGCAATGAACATTAAGCTGAAAGAAGGTAAAAAGAACTTTTGGTTTGGAGATGTTACTGCCGGAACC GGAGTTGCAGAATTAGACAGCCGTTATATTATTAATCCGAAATTGTTTTATTACAGTCCGAAGTATAGTATAAACTTAAT TACCAATTTTAATAATATTGGAGAACTGCCGCTTACGGCTCAGGATTATTTTAAGTTTACAGGCGGATTTAAAAACATGA TGAAAAAAGGAGGCAGCAGTTTTAATGTTTCATCAAATGATTTAGGAATTTCAGTTTTAAGAAACAACAGGGCCAAGGAA ATTGAAACCAAATTTGGCGCGACAAATTTCTCTTATTCTCCAGCAAAAACATGGACTATAAGCGGTTTTGGAATCCTTTC GACTTCAAAAACCGATTTAGAAACTAAATCCCAAACCACGATTCTAGATTCTGGAGATCAGCAGAAACGAGATGAATTAA CGCATCAAAAAAATAATTTAGGACTTTTTAAATTAAGTTCGACTTATAAACCAAACGATAAATTTCAGTTTGATTATGAC ATCTTAACTAAATTGTCTAAACAACAAGAAGACACTGATTTACTGCGTGAGTCTGTTGTAAACAATGTGGCGGATGCAGA AAGTATTTTTACGAATAAAAAGCAGGATCCAACCTCGGTAAACCAAAATTTAAGTTTGTATTATACACAAAGTGCCAAGA ATATTTTTGCCTTTGAAATGCAGCATTTATATCAGGATGAAAATCCTTTTTATAATGCCAATTTGCGAACACAGCCTTTT GACTTAGCAGGTTACACAGTAGGACAAAATAGAAACGATTTAAACCAGGATCGTTTTGTAAAAACCAATAAACTAGATGC AAAATTGGATTACTATTATATGATAACACCAAAAAGCAACATCAATATTACTTTAGGGAATACATATTCATATCAAAATT TTAATTCTCATATATTCCAAATTTTGGATAATGGAGACCGAAATGACTTGGAAACTCCTGAAAATAATAATGATGTCAAT TATAACTTTGATGATGTTTTTCTGGGATTTCATTATAAAATCTTAACCGGGAAATTTACTTTCACGCCAGGTGTCAGCGT ACATTCTTATGCAATGAAAAACACGCAGTTAGGGACAGATTATTCTCAGAATTTCGTAAAAGTTCTGCCGGATTTCTTCG CTTTGTACCAAATTAAAAAATCAGAAACGCTGACGTATAATTTTTCGCTGACAAATGATTTTACAGATATCAACCAATTA GCAGCTGGTTATGTTTTGTCTGATTACAGCAGTTTATTCCATGGAAATCGTTTCTTAGAAAACGCAACATCACAAGTACA TTCGCTTCGCTATTTTAAATACAATATGTTCAATTTTGAGAACATTTTTGCCAATGCAACCTATACTAAAAAAGTAGATG CGATTAAAACGCAGGCAGATTTTGAAGGAATTAATCAGTCATCAGTTCCATACAATTCAAATTTAGCCGATGAAACTTTC AGCGGAATGGGAACTTACGGCCGCTCTTTCCTGAAAAACTATAAAGCATCGGCAACAGCAAGTTTGAACTGGTCAAAATT CAACAACATTCAAAATGATAAATTAGCCACAACAGAGAGTTTTGTTCAAAATTATACCATAAGAGCTTCGACTAATTATA AAAACCTGCCAAATATTGAATTTGGTTATAACCTTTTGGTCAATAAATACAGCGGTTCTACATTTTATACCGATAAGCCT TTTGCCAGATTAGATTATTATTTTTTAGATAGTTTTTCTTTTGTTTCAGAATATGAATTCTACCATTATTACAATGGAAA CAAAACAGTAGATAACGAATACGACTTTTTGAGCGCCAGTTTAATCTACCAAAAGAAAAACAGTAAATGGGAATACAAAG TCTCGGCAACCAATTTGCTCAACACGAAATATCTTAACGACGACAGCTTCTCACAATTTTCAACAAGAGTCTCTCAATAC ACCGTACAGCCTCGTTACATCATATTTTCGATGAAATACAATTTGTAG
Upstream 100 bases:
>100_bases ACCGCGGACGTGCCGGAGGCCCACCGCCAATGGGAAGATAAAATTTATACGATTCCAAAAAAAATCCCGAAGCTTCGGGC CAAATTCCAATATTCTGATA
Downstream 100 bases:
>100_bases TATTTTGATTTCAAATATTATAGTTTTTTATGATTTGTTTAGGCAGGAATCAAATATCTTTGTGCTATATTATTAACAAC AAAAAATGTAGTTATGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 895; Mature: 895
Protein sequence:
>895_residues MNKTLFIFALFFTSICFSQSVRFDGFIQDEQKNPLEMANIMAVNNTTKAMDSYGITNDKGKFQLTLKPNTSYTVKVSYLG MKSKEIAVSTKTENIAQNIVMDGAGIELEGVEIVREMPVSIKGDTIVYNADSFKSGTEKKLEDVLKKLPGVEVNADGEIE VEGKKVSKLMVEGKDFFDGDTKLGVKNIPADAIDKVQVLRNYNEISQLKGLENDQENVAMNIKLKEGKKNFWFGDVTAGT GVAELDSRYIINPKLFYYSPKYSINLITNFNNIGELPLTAQDYFKFTGGFKNMMKKGGSSFNVSSNDLGISVLRNNRAKE IETKFGATNFSYSPAKTWTISGFGILSTSKTDLETKSQTTILDSGDQQKRDELTHQKNNLGLFKLSSTYKPNDKFQFDYD ILTKLSKQQEDTDLLRESVVNNVADAESIFTNKKQDPTSVNQNLSLYYTQSAKNIFAFEMQHLYQDENPFYNANLRTQPF DLAGYTVGQNRNDLNQDRFVKTNKLDAKLDYYYMITPKSNINITLGNTYSYQNFNSHIFQILDNGDRNDLETPENNNDVN YNFDDVFLGFHYKILTGKFTFTPGVSVHSYAMKNTQLGTDYSQNFVKVLPDFFALYQIKKSETLTYNFSLTNDFTDINQL AAGYVLSDYSSLFHGNRFLENATSQVHSLRYFKYNMFNFENIFANATYTKKVDAIKTQADFEGINQSSVPYNSNLADETF SGMGTYGRSFLKNYKASATASLNWSKFNNIQNDKLATTESFVQNYTIRASTNYKNLPNIEFGYNLLVNKYSGSTFYTDKP FARLDYYFLDSFSFVSEYEFYHYYNGNKTVDNEYDFLSASLIYQKKNSKWEYKVSATNLLNTKYLNDDSFSQFSTRVSQY TVQPRYIIFSMKYNL
Sequences:
>Translated_895_residues MNKTLFIFALFFTSICFSQSVRFDGFIQDEQKNPLEMANIMAVNNTTKAMDSYGITNDKGKFQLTLKPNTSYTVKVSYLG MKSKEIAVSTKTENIAQNIVMDGAGIELEGVEIVREMPVSIKGDTIVYNADSFKSGTEKKLEDVLKKLPGVEVNADGEIE VEGKKVSKLMVEGKDFFDGDTKLGVKNIPADAIDKVQVLRNYNEISQLKGLENDQENVAMNIKLKEGKKNFWFGDVTAGT GVAELDSRYIINPKLFYYSPKYSINLITNFNNIGELPLTAQDYFKFTGGFKNMMKKGGSSFNVSSNDLGISVLRNNRAKE IETKFGATNFSYSPAKTWTISGFGILSTSKTDLETKSQTTILDSGDQQKRDELTHQKNNLGLFKLSSTYKPNDKFQFDYD ILTKLSKQQEDTDLLRESVVNNVADAESIFTNKKQDPTSVNQNLSLYYTQSAKNIFAFEMQHLYQDENPFYNANLRTQPF DLAGYTVGQNRNDLNQDRFVKTNKLDAKLDYYYMITPKSNINITLGNTYSYQNFNSHIFQILDNGDRNDLETPENNNDVN YNFDDVFLGFHYKILTGKFTFTPGVSVHSYAMKNTQLGTDYSQNFVKVLPDFFALYQIKKSETLTYNFSLTNDFTDINQL AAGYVLSDYSSLFHGNRFLENATSQVHSLRYFKYNMFNFENIFANATYTKKVDAIKTQADFEGINQSSVPYNSNLADETF SGMGTYGRSFLKNYKASATASLNWSKFNNIQNDKLATTESFVQNYTIRASTNYKNLPNIEFGYNLLVNKYSGSTFYTDKP FARLDYYFLDSFSFVSEYEFYHYYNGNKTVDNEYDFLSASLIYQKKNSKWEYKVSATNLLNTKYLNDDSFSQFSTRVSQY TVQPRYIIFSMKYNL >Mature_895_residues MNKTLFIFALFFTSICFSQSVRFDGFIQDEQKNPLEMANIMAVNNTTKAMDSYGITNDKGKFQLTLKPNTSYTVKVSYLG MKSKEIAVSTKTENIAQNIVMDGAGIELEGVEIVREMPVSIKGDTIVYNADSFKSGTEKKLEDVLKKLPGVEVNADGEIE VEGKKVSKLMVEGKDFFDGDTKLGVKNIPADAIDKVQVLRNYNEISQLKGLENDQENVAMNIKLKEGKKNFWFGDVTAGT GVAELDSRYIINPKLFYYSPKYSINLITNFNNIGELPLTAQDYFKFTGGFKNMMKKGGSSFNVSSNDLGISVLRNNRAKE IETKFGATNFSYSPAKTWTISGFGILSTSKTDLETKSQTTILDSGDQQKRDELTHQKNNLGLFKLSSTYKPNDKFQFDYD ILTKLSKQQEDTDLLRESVVNNVADAESIFTNKKQDPTSVNQNLSLYYTQSAKNIFAFEMQHLYQDENPFYNANLRTQPF DLAGYTVGQNRNDLNQDRFVKTNKLDAKLDYYYMITPKSNINITLGNTYSYQNFNSHIFQILDNGDRNDLETPENNNDVN YNFDDVFLGFHYKILTGKFTFTPGVSVHSYAMKNTQLGTDYSQNFVKVLPDFFALYQIKKSETLTYNFSLTNDFTDINQL AAGYVLSDYSSLFHGNRFLENATSQVHSLRYFKYNMFNFENIFANATYTKKVDAIKTQADFEGINQSSVPYNSNLADETF SGMGTYGRSFLKNYKASATASLNWSKFNNIQNDKLATTESFVQNYTIRASTNYKNLPNIEFGYNLLVNKYSGSTFYTDKP FARLDYYFLDSFSFVSEYEFYHYYNGNKTVDNEYDFLSASLIYQKKNSKWEYKVSATNLLNTKYLNDDSFSQFSTRVSQY TVQPRYIIFSMKYNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102257; Mature: 102257
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTLFIFALFFTSICFSQSVRFDGFIQDEQKNPLEMANIMAVNNTTKAMDSYGITNDKG CCCEEEEHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECCCHHHHHHCCCCCCCC KFQLTLKPNTSYTVKVSYLGMKSKEIAVSTKTENIAQNIVMDGAGIELEGVEIVREMPVS EEEEEECCCCCEEEEEEEECCCCCEEEEEECHHHHHHHHEECCCCCEEHHHHHHHHCCCE IKGDTIVYNADSFKSGTEKKLEDVLKKLPGVEVNADGEIEVEGKKVSKLMVEGKDFFDGD ECCCEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCEEEECCCEEEEEEECCCCCCCCC TKLGVKNIPADAIDKVQVLRNYNEISQLKGLENDQENVAMNIKLKEGKKNFWFGDVTAGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCC GVAELDSRYIINPKLFYYSPKYSINLITNFNNIGELPLTAQDYFKFTGGFKNMMKKGGSS CHHHCCCEEEECCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCE FNVSSNDLGISVLRNNRAKEIETKFGATNFSYSPAKTWTISGFGILSTSKTDLETKSQTT EECCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEECEEEEECCCCCCCCCCCEE ILDSGDQQKRDELTHQKNNLGLFKLSSTYKPNDKFQFDYDILTKLSKQQEDTDLLRESVV EECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECHHHHHHHHCCCHHHHHHHHHHH NNVADAESIFTNKKQDPTSVNQNLSLYYTQSAKNIFAFEMQHLYQDENPFYNANLRTQPF HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCCCC DLAGYTVGQNRNDLNQDRFVKTNKLDAKLDYYYMITPKSNINITLGNTYSYQNFNSHIFQ CEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCEEEEECCEEECCCCCCHHHH ILDNGDRNDLETPENNNDVNYNFDDVFLGFHYKILTGKFTFTPGVSVHSYAMKNTQLGTD EECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCEEHEEECCCCCCCC YSQNFVKVLPDFFALYQIKKSETLTYNFSLTNDFTDINQLAAGYVLSDYSSLFHGNRFLE HHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHH NATSQVHSLRYFKYNMFNFENIFANATYTKKVDAIKTQADFEGINQSSVPYNSNLADETF HHHHHHHHEEEEEEECCCHHHHEECCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH SGMGTYGRSFLKNYKASATASLNWSKFNNIQNDKLATTESFVQNYTIRASTNYKNLPNIE HCCCHHHHHHHHHCCCCCEEEECHHHHCCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCC FGYNLLVNKYSGSTFYTDKPFARLDYYFLDSFSFVSEYEFYHYYNGNKTVDNEYDFLSAS CCCEEEEEEECCCEEECCCCHHHEEEHHHCCCHHHHCEEEEEEECCCEECCCCCCEEEEE LIYQKKNSKWEYKVSATNLLNTKYLNDDSFSQFSTRVSQYTVQPRYIIFSMKYNL EEEEECCCCEEEEEEECEEEEEEECCCCCHHHHHHHHHHEEECCEEEEEEEEECC >Mature Secondary Structure MNKTLFIFALFFTSICFSQSVRFDGFIQDEQKNPLEMANIMAVNNTTKAMDSYGITNDKG CCCEEEEHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECCCHHHHHHCCCCCCCC KFQLTLKPNTSYTVKVSYLGMKSKEIAVSTKTENIAQNIVMDGAGIELEGVEIVREMPVS EEEEEECCCCCEEEEEEEECCCCCEEEEEECHHHHHHHHEECCCCCEEHHHHHHHHCCCE IKGDTIVYNADSFKSGTEKKLEDVLKKLPGVEVNADGEIEVEGKKVSKLMVEGKDFFDGD ECCCEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCEEEECCCEEEEEEECCCCCCCCC TKLGVKNIPADAIDKVQVLRNYNEISQLKGLENDQENVAMNIKLKEGKKNFWFGDVTAGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCC GVAELDSRYIINPKLFYYSPKYSINLITNFNNIGELPLTAQDYFKFTGGFKNMMKKGGSS CHHHCCCEEEECCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCE FNVSSNDLGISVLRNNRAKEIETKFGATNFSYSPAKTWTISGFGILSTSKTDLETKSQTT EECCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEECEEEEECCCCCCCCCCCEE ILDSGDQQKRDELTHQKNNLGLFKLSSTYKPNDKFQFDYDILTKLSKQQEDTDLLRESVV EECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECHHHHHHHHCCCHHHHHHHHHHH NNVADAESIFTNKKQDPTSVNQNLSLYYTQSAKNIFAFEMQHLYQDENPFYNANLRTQPF HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCCCC DLAGYTVGQNRNDLNQDRFVKTNKLDAKLDYYYMITPKSNINITLGNTYSYQNFNSHIFQ CEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCEEEEECCEEECCCCCCHHHH ILDNGDRNDLETPENNNDVNYNFDDVFLGFHYKILTGKFTFTPGVSVHSYAMKNTQLGTD EECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCEEHEEECCCCCCCC YSQNFVKVLPDFFALYQIKKSETLTYNFSLTNDFTDINQLAAGYVLSDYSSLFHGNRFLE HHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHH NATSQVHSLRYFKYNMFNFENIFANATYTKKVDAIKTQADFEGINQSSVPYNSNLADETF HHHHHHHHEEEEEEECCCHHHHEECCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH SGMGTYGRSFLKNYKASATASLNWSKFNNIQNDKLATTESFVQNYTIRASTNYKNLPNIE HCCCHHHHHHHHHCCCCCEEEECHHHHCCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCC FGYNLLVNKYSGSTFYTDKPFARLDYYFLDSFSFVSEYEFYHYYNGNKTVDNEYDFLSAS CCCEEEEEEECCCEEECCCCHHHEEEHHHCCCHHHHCEEEEEEECCCEECCCCCCEEEEE LIYQKKNSKWEYKVSATNLLNTKYLNDDSFSQFSTRVSQYTVQPRYIIFSMKYNL EEEEECCCCEEEEEEECEEEEEEECCCCCHHHHHHHHHHEEECCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA