| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is gntX [H]
Identifier: 146298559
GI number: 146298559
Start: 888716
End: 889336
Strand: Direct
Name: gntX [H]
Synonym: Fjoh_0797
Alternate gene names: 146298559
Gene position: 888716-889336 (Clockwise)
Preceding gene: 146298553
Following gene: 146298561
Centisome position: 14.58
GC content: 33.33
Gene sequence:
>621_bases ATGACTAATGAAACGGTTTTATGTACAAATTGCAGGCATGAAATGCCTTTAACGCAATATCATCTTGATCCAGATAATCA GGCTGTCAAAAAATTCTACGGCAAGGTCGAAGTCGAACATGTATCTGCCTTTTTATACTTTAATAAACAAGGCATTGTTC AGGAACTCATCCATAATTTAAAATATAAAGGGCACGAAGAAATTGGAACAGTTTTGGGCAATTGGCATGCAGAAGATTTA AAGGAACTAAAACTCAAAAATCCGTTTGATGTTATAATTCCTGTACCGCTTCATCCCAGAAAATTTAAAGAAAGAGGTTA TAATCAGGTTACAACATTTGGAAAAGCTTTATCTGAAACCTTAAAAATTCCTTTTGATAATTCTATTTTATACCGAAAGA AATATTCTAAAACACAATCAAAAAAGAATCTTTTAGGGAGATCTGAAAATATCGAAAACAGTTTTGATGTTCATTTATCC AAAGAAAATCAAAACAAACATTTTTTAATTGTAGACGATGTTCTAACCACCGGAGCAACTCTCGAAGCTTGTTCTCGTGC TTTACTCAAAATTCCGGGAGCAAGAATCAGTATTGTCTGCATGGCAATGGCAAATTCGTAA
Upstream 100 bases:
>100_bases TATTTTGGCTATTTTTGTAACTAAATTCTTTCTATTTGTGTTTAATTTTATTATTGATCTCTTTTTTCCTAAAGTCTGCT CCGGATGCCACTCTGTTTTA
Downstream 100 bases:
>100_bases AGATTAAAATTTTAATATAAAAAATCCCAAATTTCAACCACTTATTTCAGTTTGAAATTTGGGATTTTATAAATATTAGT TTATAATAATCTTTCTAACA
Product: amidophosphoribosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTNETVLCTNCRHEMPLTQYHLDPDNQAVKKFYGKVEVEHVSAFLYFNKQGIVQELIHNLKYKGHEEIGTVLGNWHAEDL KELKLKNPFDVIIPVPLHPRKFKERGYNQVTTFGKALSETLKIPFDNSILYRKKYSKTQSKKNLLGRSENIENSFDVHLS KENQNKHFLIVDDVLTTGATLEACSRALLKIPGARISIVCMAMANS
Sequences:
>Translated_206_residues MTNETVLCTNCRHEMPLTQYHLDPDNQAVKKFYGKVEVEHVSAFLYFNKQGIVQELIHNLKYKGHEEIGTVLGNWHAEDL KELKLKNPFDVIIPVPLHPRKFKERGYNQVTTFGKALSETLKIPFDNSILYRKKYSKTQSKKNLLGRSENIENSFDVHLS KENQNKHFLIVDDVLTTGATLEACSRALLKIPGARISIVCMAMANS >Mature_205_residues TNETVLCTNCRHEMPLTQYHLDPDNQAVKKFYGKVEVEHVSAFLYFNKQGIVQELIHNLKYKGHEEIGTVLGNWHAEDLK ELKLKNPFDVIIPVPLHPRKFKERGYNQVTTFGKALSETLKIPFDNSILYRKKYSKTQSKKNLLGRSENIENSFDVHLSK ENQNKHFLIVDDVLTTGATLEACSRALLKIPGARISIVCMAMANS
Specific function: Could be involved in gluconate metabolism [H]
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComF/GntX family [H]
Homologues:
Organism=Escherichia coli, GI87082263, Length=206, Percent_Identity=28.6407766990291, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005222 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 23558; Mature: 23427
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNETVLCTNCRHEMPLTQYHLDPDNQAVKKFYGKVEVEHVSAFLYFNKQGIVQELIHNL CCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHCCEEEEHEEEEEEECCCCHHHHHHHHC KYKGHEEIGTVLGNWHAEDLKELKLKNPFDVIIPVPLHPRKFKERGYNQVTTFGKALSET CCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHH LKIPFDNSILYRKKYSKTQSKKNLLGRSENIENSFDVHLSKENQNKHFLIVDDVLTTGAT HCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCH LEACSRALLKIPGARISIVCMAMANS HHHHHHHHHHCCCCEEEEEEEEECCC >Mature Secondary Structure TNETVLCTNCRHEMPLTQYHLDPDNQAVKKFYGKVEVEHVSAFLYFNKQGIVQELIHNL CCCCEEEECCCCCCCCCEEEECCCHHHHHHHHCCEEEEHEEEEEEECCCCHHHHHHHHC KYKGHEEIGTVLGNWHAEDLKELKLKNPFDVIIPVPLHPRKFKERGYNQVTTFGKALSET CCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHH LKIPFDNSILYRKKYSKTQSKKNLLGRSENIENSFDVHLSKENQNKHFLIVDDVLTTGAT HCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCH LEACSRALLKIPGARISIVCMAMANS HHHHHHHHHHCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]