| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is thiL [H]
Identifier: 146298553
GI number: 146298553
Start: 881497
End: 882543
Strand: Direct
Name: thiL [H]
Synonym: Fjoh_0791
Alternate gene names: 146298553
Gene position: 881497-882543 (Clockwise)
Preceding gene: 146298550
Following gene: 146298559
Centisome position: 14.46
GC content: 36.29
Gene sequence:
>1047_bases ATGATCGAAGATAAAAATCCGCAACGCACCAGCATATCACAATTAGGCGAGTTTGGCTTAATTGAGCATTTAACACGAAA CTTTGATGTTACACAAGAATCTACTTTAAAAAGTATTGGCGACGATGCAGCTGTTCTTGATTTTAAAGACAAAAAAACCG TTATTTCAACCGATTTATTAATTGAAGGTGTTCACTTTGATCTGGCTTATATGCCTTTGAAACATTTAGGTTATAAAGCA GTTATAGTAAACCTGTCTGATATTTGCGCCATGAATGCAAAACCAACTCAAATTACAGTTTCAGTTGCTGTTTCTAATCG CTTTCCTTTGGAAGCTTTAGAAGAATTATTTGAAGGTATTACACATGCAGCAAAAGAATACAAAGTAGATGTTATTGGCG GCGATACTACCTCATCTCAAAAAGGATTAATTATAAGTATTACAGCAATTGGTGAAGCTGATGAAAATGAAATTGCTTAC CGAAACGGTGCCAAACAAACCGATTTACTGGTTGTAACGGGAGATATTGGCGCAGCTTATATGGGATTACAGGTTTTAGA GCGTGAAAAACAGGTTTTTCAGGTAAATCCAAACAGTCAGCCGGATTTAGATCCTTATACGTATTTGGTCGAAAGACAAT TAAAACCAGAAGCCAGAACAGATGTTCGTACACTTTTGCATGCCCTTGAAATTAAACCAACTTCAATGATTGATATTTCT GATGGTTTATCTTCAGAGATTATACATTTGTGCAAACAGTCAAAAGTGGGCTGTAATTTATATGAAGATAAACTTCCGTT AGATCCTCAGTTTATTTCGACTTGCGAAGAGTTTAATATCGACAGCACAACCGTTGCCATTAACGGCGGAGAGGACTATG AACTCCTTTTTACGATTGATATTAATGATTTTGATAAGATAAAAGGAAATCCAAACTTTTCTATCATTGGCCACATGGCA GATGAAAGCGAAGGAATTCATTTGGTAACCCGTGCTAATACTAAGATTGCTTTAAAAGCACGCGGCTGGGATGCTTTGAG TGAATAA
Upstream 100 bases:
>100_bases TTAGAACCTTAGCTTCTTAGTCCCGATAGCTATCGGGATTAGTATCTTTAAAAAAAACCTTTGTACCTTTGCTCCTTACA AACTTTGGAACTCAGAAAAA
Downstream 100 bases:
>100_bases ATTCAGTCTCAGTATTCAGTCTCAGTTTATAAAACCTGATAGAATTAGATTCTGTCAGGTTTTATTTTTATGTATTTAAA TCTAAGATCTACATTCGTAA
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MIEDKNPQRTSISQLGEFGLIEHLTRNFDVTQESTLKSIGDDAAVLDFKDKKTVISTDLLIEGVHFDLAYMPLKHLGYKA VIVNLSDICAMNAKPTQITVSVAVSNRFPLEALEELFEGITHAAKEYKVDVIGGDTTSSQKGLIISITAIGEADENEIAY RNGAKQTDLLVVTGDIGAAYMGLQVLEREKQVFQVNPNSQPDLDPYTYLVERQLKPEARTDVRTLLHALEIKPTSMIDIS DGLSSEIIHLCKQSKVGCNLYEDKLPLDPQFISTCEEFNIDSTTVAINGGEDYELLFTIDINDFDKIKGNPNFSIIGHMA DESEGIHLVTRANTKIALKARGWDALSE
Sequences:
>Translated_348_residues MIEDKNPQRTSISQLGEFGLIEHLTRNFDVTQESTLKSIGDDAAVLDFKDKKTVISTDLLIEGVHFDLAYMPLKHLGYKA VIVNLSDICAMNAKPTQITVSVAVSNRFPLEALEELFEGITHAAKEYKVDVIGGDTTSSQKGLIISITAIGEADENEIAY RNGAKQTDLLVVTGDIGAAYMGLQVLEREKQVFQVNPNSQPDLDPYTYLVERQLKPEARTDVRTLLHALEIKPTSMIDIS DGLSSEIIHLCKQSKVGCNLYEDKLPLDPQFISTCEEFNIDSTTVAINGGEDYELLFTIDINDFDKIKGNPNFSIIGHMA DESEGIHLVTRANTKIALKARGWDALSE >Mature_348_residues MIEDKNPQRTSISQLGEFGLIEHLTRNFDVTQESTLKSIGDDAAVLDFKDKKTVISTDLLIEGVHFDLAYMPLKHLGYKA VIVNLSDICAMNAKPTQITVSVAVSNRFPLEALEELFEGITHAAKEYKVDVIGGDTTSSQKGLIISITAIGEADENEIAY RNGAKQTDLLVVTGDIGAAYMGLQVLEREKQVFQVNPNSQPDLDPYTYLVERQLKPEARTDVRTLLHALEIKPTSMIDIS DGLSSEIIHLCKQSKVGCNLYEDKLPLDPQFISTCEEFNIDSTTVAINGGEDYELLFTIDINDFDKIKGNPNFSIIGHMA DESEGIHLVTRANTKIALKARGWDALSE
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=338, Percent_Identity=33.4319526627219, Blast_Score=132, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 38450; Mature: 38450
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEDKNPQRTSISQLGEFGLIEHLTRNFDVTQESTLKSIGDDAAVLDFKDKKTVISTDLL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEHE IEGVHFDLAYMPLKHLGYKAVIVNLSDICAMNAKPTQITVSVAVSNRFPLEALEELFEGI EECCEEEHEEHHHHHCCEEEEEEEHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH THAAKEYKVDVIGGDTTSSQKGLIISITAIGEADENEIAYRNGAKQTDLLVVTGDIGAAY HHHHHHEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCHHH MGLQVLEREKQVFQVNPNSQPDLDPYTYLVERQLKPEARTDVRTLLHALEIKPTSMIDIS HHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEC DGLSSEIIHLCKQSKVGCNLYEDKLPLDPQFISTCEEFNIDSTTVAINGGEDYELLFTID CCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEE INDFDKIKGNPNFSIIGHMADESEGIHLVTRANTKIALKARGWDALSE CCCHHHCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure MIEDKNPQRTSISQLGEFGLIEHLTRNFDVTQESTLKSIGDDAAVLDFKDKKTVISTDLL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEHE IEGVHFDLAYMPLKHLGYKAVIVNLSDICAMNAKPTQITVSVAVSNRFPLEALEELFEGI EECCEEEHEEHHHHHCCEEEEEEEHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH THAAKEYKVDVIGGDTTSSQKGLIISITAIGEADENEIAYRNGAKQTDLLVVTGDIGAAY HHHHHHEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCHHH MGLQVLEREKQVFQVNPNSQPDLDPYTYLVERQLKPEARTDVRTLLHALEIKPTSMIDIS HHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEC DGLSSEIIHLCKQSKVGCNLYEDKLPLDPQFISTCEEFNIDSTTVAINGGEDYELLFTID CCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEE INDFDKIKGNPNFSIIGHMADESEGIHLVTRANTKIALKARGWDALSE CCCHHHCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]