| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298545
Identifier: 146298545
GI number: 146298545
Start: 874186
End: 874902
Strand: Direct
Name: 146298545
Synonym: Fjoh_0783
Alternate gene names: NA
Gene position: 874186-874902 (Clockwise)
Preceding gene: 146298533
Following gene: 146298546
Centisome position: 14.34
GC content: 35.7
Gene sequence:
>717_bases ATGGATAAAAAAGTAGATGCCGAATCTGTTGCAAAAAGCGAACAAAATGCAATGAATGCAATAACCATTGACTGTGTTGT TTTTGGTTTTGATGAAGGAAGCCTTGAAGTCCTTTTAGTGCAGCATGCTGAAGGTATTAGTAAAGGAAAATGGGGACTTC CCGGCGGATGGATTTATAAAAAAGAAAGTACAGATAATGCCGCACATCGTTTATTGAACGAGCTTACCGGACTTGATAAT ATTTACCTGGAGCAGCTTAAGGCTTTTGGAGATCCGGATCGTTTTCCGCTTCGACGTGTTATAACTATAGGATATTACGC TCTTGTAAAAAGAGAAGATTACAATATTAAAGCCGGTTTTACAGCATCTGACGCTAAATGGTACAAAATCAACAGCATAC CGGATTTGATTTACGATCACAATGAGATTTTATCTTACAGTATACAAAATCTTCGCAACCGTGTTCGTCAGGCTCCTATT GGATTTAATCTCCTTCCGGAAAAGTTTACTTTACTGCAGTTAATGCATCTTTATGAAGAAATCCTTGGAATTGAAATGGA CAAATCTAATTTCCGAAGAAAAATTCTGCACATGAAATTATTGGTCGCTTTAGATGAAAAACAACAAGATGTTTCACACA GAGCAGCTAAACTATATAAGTTTGATCCGGATATTTATAAAAAACTGACTGAAAAAGGATTCAATTTTGAATTTTAA
Upstream 100 bases:
>100_bases CACTGAACGTCAATTTTTTGCTTTGTTAAAAAAATATTAAGTAATCAAAAAAGGCAGTTATGCATTTTATTTGTTTAATT TGTCAAAATTTATTTCGCAC
Downstream 100 bases:
>100_bases AAACCGCTTATAAAAGCATACAATGGCAATATCATCATCTAAAAAAAACTCACAAACAAACAGCTGCATTGCCGCCAATA CTGTAACACCCGAAATTGAT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: DNA Hydrolase; Hydrolase NUDIX Family; Nudix Hydrolase; NUDIX Family Hydrolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Hydrolase; Hydrolase NUDIX Family Protein; DNA Hydrolase With MutT Domain-Containing Protein; Phosphohydrolase; MutT/NUDIX Family DNA Hydrolase; MutT/Nudix Family DNA Hydrolase; NUDIX Domain-Containing Protein; MutT/NUDIX Family Protein; Hydrolase Nudix Family; Nudix Hydrolase Family Protein; Nudix Superfamily Hydrolase; NTP Pyrophosphohydrolase; Hydrolase MutT/Nudix Family Protein; Protein Containing NUDIX Domain; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MDKKVDAESVAKSEQNAMNAITIDCVVFGFDEGSLEVLLVQHAEGISKGKWGLPGGWIYKKESTDNAAHRLLNELTGLDN IYLEQLKAFGDPDRFPLRRVITIGYYALVKREDYNIKAGFTASDAKWYKINSIPDLIYDHNEILSYSIQNLRNRVRQAPI GFNLLPEKFTLLQLMHLYEEILGIEMDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKGFNFEF
Sequences:
>Translated_238_residues MDKKVDAESVAKSEQNAMNAITIDCVVFGFDEGSLEVLLVQHAEGISKGKWGLPGGWIYKKESTDNAAHRLLNELTGLDN IYLEQLKAFGDPDRFPLRRVITIGYYALVKREDYNIKAGFTASDAKWYKINSIPDLIYDHNEILSYSIQNLRNRVRQAPI GFNLLPEKFTLLQLMHLYEEILGIEMDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKGFNFEF >Mature_238_residues MDKKVDAESVAKSEQNAMNAITIDCVVFGFDEGSLEVLLVQHAEGISKGKWGLPGGWIYKKESTDNAAHRLLNELTGLDN IYLEQLKAFGDPDRFPLRRVITIGYYALVKREDYNIKAGFTASDAKWYKINSIPDLIYDHNEILSYSIQNLRNRVRQAPI GFNLLPEKFTLLQLMHLYEEILGIEMDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKGFNFEF
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27495; Mature: 27495
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKVDAESVAKSEQNAMNAITIDCVVFGFDEGSLEVLLVQHAEGISKGKWGLPGGWIYK CCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEE KESTDNAAHRLLNELTGLDNIYLEQLKAFGDPDRFPLRRVITIGYYALVKREDYNIKAGF CCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCEECCC TASDAKWYKINSIPDLIYDHNEILSYSIQNLRNRVRQAPIGFNLLPEKFTLLQLMHLYEE CCCCCCEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ILGIEMDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKGFNFEF HHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MDKKVDAESVAKSEQNAMNAITIDCVVFGFDEGSLEVLLVQHAEGISKGKWGLPGGWIYK CCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEE KESTDNAAHRLLNELTGLDNIYLEQLKAFGDPDRFPLRRVITIGYYALVKREDYNIKAGF CCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCEECCC TASDAKWYKINSIPDLIYDHNEILSYSIQNLRNRVRQAPIGFNLLPEKFTLLQLMHLYEE CCCCCCEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ILGIEMDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKGFNFEF HHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA